FFCP PHASE1:Hg19::chr12:57629315..57629334,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:57629315..57629334,- | |||
|coexpression_cluster_id=C243 | |coexpression_cluster_id=C243 | ||
|description=CAGE_peak_at_chr12:57629315..57629334,- | |description=CAGE_peak_at_chr12:57629315..57629334,- | ||
|id=chr12:57629315..57629334,- | |id=chr12:57629315..57629334,- | ||
|ontology_enrichment_celltype=CL:0000153!1.54e-18!9;CL:0000447!1.54e-18!9;CL:0000667!5.31e-13!6;CL:0000058!5.31e-13!6;CL:0000138!5.31e-13!6;CL:0000327!4.00e-11!14;CL:0000214!3.26e-07!3 | |ontology_enrichment_celltype=CL:0000153!1.54e-18!9;CL:0000447!1.54e-18!9;CL:0000667!5.31e-13!6;CL:0000058!5.31e-13!6;CL:0000138!5.31e-13!6;CL:0000327!4.00e-11!14;CL:0000214!3.26e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000138;1.95e-59;6!CL:0000153;1.26e-56;9!CL:0000447;1.26e-56;9!CL:0000327;5.73e-34;15!CL:0000499;3.91e-18;28!CL:0000222;1.92e-15;1!CL:0000151;2.00e-12;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.63e-59,6;CL:0000138,1.63e-59,6;CL:0000153,8.64e-57,9;CL:0000447,8.64e-57,9;CL:0000327,4.57e-34,15;CL:0000499,3.46e-18,28;CL:0000151,4.26e-14,36 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.92e-15;1!UBERON:0010226;1.92e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3369;1.92e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,9.99e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-13!115;UBERON:0006915!3.26e-07!3;UBERON:0002018!3.26e-07!3;UBERON:0002217!3.26e-07!3;UBERON:0007616!3.26e-07!3;UBERON:0004457!3.33e-07!12;UBERON:0000042!3.33e-07!12 | |ontology_enrichment_uberon=UBERON:0007023!1.54e-13!115;UBERON:0006915!3.26e-07!3;UBERON:0002018!3.26e-07!3;UBERON:0002217!3.26e-07!3;UBERON:0007616!3.26e-07!3;UBERON:0004457!3.33e-07!12;UBERON:0000042!3.33e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.92e-15;1!UBERON:0002082;1.92e-15;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,1.78e-15,1;UBERON:0002082,1.78e-15,1;UBERON:0010226,1.78e-15,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,3.00802746381534,1.73815822752988,2.3858578411533,10.2193322763554,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902838299183157,2.27407504055985,0,0.664225598535437,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0.876901770507525,0,0,0,0,0.281695602532241,0,0,0.7133421029625,0,1.68886108238131,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.71623345421307,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0.295547618953547,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,1.06687918137261,0.0882561266915003,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0.458320848023367,0,0,0,0.223171457441873,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.235479278551542,0,0,0,0.215927591218621,1.43325506366115,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.227336094654718,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.435433495793923,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,3.00802746381534,1.73815822752988,2.3858578411533,10.2193322763554,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902838299183157,2.27407504055985,0,0.664225598535437,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0.876901770507525,0,0,0,0,0.281695602532241,0,0,0.7133421029625,0,1.68886108238131,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.71623345421307,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0.295547618953547,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,1.06687918137261,0.0882561266915003,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0.458320848023367,0,0,0,0.223171457441873,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.235479278551542,0,0,0,0.215927591218621,1.43325506366115,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.227336094654718,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.435433495793923,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr12:57629315..57629334,- | |short_description=p@chr12:57629315..57629334,- | ||
}} | }} |
Latest revision as of 10:41, 24 July 2015
Short description: | p@chr12:57629315..57629334, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57629315..57629334, - |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.63e-59 | 6 |
chondrocyte | 1.63e-59 | 6 |
GAG secreting cell | 8.64e-57 | 9 |
carbohydrate secreting cell | 8.64e-57 | 9 |
extracellular matrix secreting cell | 4.57e-34 | 15 |
stromal cell | 3.46e-18 | 28 |
secretory cell | 4.26e-14 | 36 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 1.78e-15 | 1 |
cardiac ventricle | 1.78e-15 | 1 |
future cardiac ventricle | 1.78e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 9.99e-16 | 1 |