FFCP PHASE1:Hg19::chr12:57605894..57605910,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:57605894..57605910,+ | |||
|coexpression_cluster_id=C1365 | |coexpression_cluster_id=C1365 | ||
|description=CAGE_peak_at_chr12:57605894..57605910,+ | |description=CAGE_peak_at_chr12:57605894..57605910,+ | ||
|id=chr12:57605894..57605910,+ | |id=chr12:57605894..57605910,+ | ||
|ontology_enrichment_celltype=CL:0002620;1.09e-08;23!CL:0002334;2.07e-08;12!CL:0002580;1.35e-07;3!CL:0002579;1.42e-07;3!CL:0000136;3.78e-07;13!CL:0002615;9.37e-07;3 | |ontology_enrichment_celltype=CL:0000057!1.40e-14!75;CL:0000055!8.30e-13!180;CL:0000048!2.57e-10!430;CL:0000723!1.61e-09!436;CL:0002320!8.64e-09!365;CL:0000034!1.19e-08!444;CL:0002334!6.49e-08!12;CL:0000134!9.79e-08!358;CL:0000219!5.83e-07!390;CL:0002620!7.13e-07!23 | ||
| | |ontology_enrichment_celltype_v019=CL:0002620;1.09e-08;23!CL:0002334;2.07e-08;12!CL:0002580;1.35e-07;3!CL:0002579;1.42e-07;3!CL:0000136;3.78e-07;13!CL:0002615;9.37e-07;3 | ||
|ontology_enrichment_disease=DOID:17;6.62e-07;5!DOID:450;6.62e-07;5!DOID:66;6.62e-07;5!DOID:423;6.62e-07;5!DOID:0080000;6.62e-07;5!DOID:11722;6.62e-07;5 | |ontology_enrichment_celltype_v019_2=CL:0000048,2.19e-14,427;CL:0000723,6.78e-14,433;CL:0002320,7.01e-14,361;CL:0000034,2.90e-13,441;CL:0000134,3.53e-13,354;CL:0000057,1.21e-11,76;CL:0000219,5.58e-11,386;CL:0000136,7.16e-10,15;CL:0002620,7.68e-09,23;CL:0002334,2.17e-08,12;CL:0002580,1.23e-07,3;CL:0002579,2.06e-07,3;CL:0002615,9.89e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0004457;8.82e-14;9!UBERON:0000042;8.82e-14;9!UBERON:0003688;1.16e-12;6!UBERON:0002358;1.16e-12;6!UBERON:0003684;1.16e-12;6!UBERON:0001178;1.16e-12;6!UBERON:0001013;1.90e-08;14 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.62e-07;5!DOID:450;6.62e-07;5!DOID:66;6.62e-07;5!DOID:423;6.62e-07;5!DOID:0080000;6.62e-07;5!DOID:11722;6.62e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.78e-07,5;DOID:450,3.78e-07,5;DOID:66,3.78e-07,5;DOID:423,3.78e-07,5;DOID:0080000,3.78e-07,5;DOID:11722,3.78e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.61e-09!659;UBERON:0002384!6.62e-09!375;UBERON:0000062!2.69e-07!511;UBERON:0002204!3.87e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.82e-14;9!UBERON:0000042;8.82e-14;9!UBERON:0003688;1.16e-12;6!UBERON:0002358;1.16e-12;6!UBERON:0003684;1.16e-12;6!UBERON:0001178;1.16e-12;6!UBERON:0001013;1.90e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.75e-14,371;UBERON:0003688,1.74e-12,6;UBERON:0002358,1.74e-12,6;UBERON:0003684,1.74e-12,6;UBERON:0001178,1.74e-12,6;UBERON:0004457,4.36e-10,12;UBERON:0000042,4.36e-10,12;UBERON:0001013,1.21e-08,14 | |||
|phase1_expression=2.36181893051724,5.56661362116556,1.55049844505568,3.00219895059391,1.34088328328186,0.872338524100369,0,1.26343974685366,3.65659879479774,0.245733936501509,0,0,0.527533956456907,0.866364470720326,0.994192127183747,0.672325146451775,0.602694528023977,0.730310090387373,0,0.369363174230364,0.612002073732759,1.25381888591235,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.868043482863407,0.895661896959697,0.32389366601898,0.257575567634187,1.30858414901608,1.13362783106643,1.4555043671269,0.929716147622738,0.411167888021826,0.309706370895104,1.43846196161075,0.512321413058201,0,0.689491361473237,0,1.35426486594342,1.88242339542605,1.09162460023138,0.449446968890169,0.918251677112708,0,0,1.9791078011203,0.598390972864896,0.852449501065388,0.290209238628584,0,0.622822248995575,0.75374599577023,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0.336985893439485,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.722878304769133,1.00267582127178,1.44846518960824,0.795285947051099,4.86634870302636,0,0.221729397462564,0.351339142772504,0.130979075497713,0,0,0.97364218096405,0.348259474598534,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,0.926864265692532,6.88407889797153,0.709336764396714,0.560677600142307,1.06748995729705,0.24666754841716,0,0.269421344139376,0.653847612453835,1.36221684880438,2.88087962239999,0.468642863667593,0.936480230490962,0,0.149448680551801,0,0.323745888736263,0,0,0.368502951935304,0.826606249406124,0,2.22540236350701,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0.600952235626387,0.113432183160021,1.79389635688862,2.56268866582281,3.17897851739343,1.50045548042201,0.92747276314595,3.09168648054755,1.8611685633159,2.53164498361899,0.876933046450788,2.01947019395292,1.01254888506529,1.77810662500693,3.19508633264953,0.403008392910561,0.508681776931463,0.386521706326594,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0.643240938192885,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0.474541238222193,0,0.196221465125346,0,0,1.40241773803446,0.4115740113314,1.47008711385542,2.53510069643662,0.982827216677626,1.18157981336281,0,0.245976877086227,0,0.109750285408626,0,0,0,0.977424915930974,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.308482478109971,0,0.571652865261156,0.224262168690721,0,0.07333828582095,0.646358578788889,3.57656445851882,0,1.06375246633948,3.12022310734098,0.514414748524284,0,0,0.285955987316295,3.25572963234866,1.64648067356154,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,1.2162378064119,2.51128545716063,10.5416969741516,0.479249710983165,0,1.42636905040718,1.01346914667305,1.64381058040307,0.716243852959582,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,1.24900292158013,1.41932173530541,0.819989904948992,0,0,0,0,0,0.781952530212746,1.37060810223918,1.71571711905428,0.620304078368662,0.215714200818617,0,0,0,0,2.97729369382532,2.30192959932094,5.3325417942284,2.17836553734692,2.04682899626681,4.66476371316462,2.96836132889982,0.462629081407967,0.710246901252508,0.657017248110473,0.519254429183621,0.813472649219715,0.362578348774867,0.200506470303285,0.0920809889358963,0.459257792658427,1.27463817604702,2.62248829918848,0,0,0,1.46139224653261,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0.48335359146061,0.154048617114644,0.15350367472613,0.275673144969061,0.429680979473094,0.145016693914229,0,0.445160178233687,0,0,0,0.10115778085555,1.39453664789186,5.66662224295152,1.3940745403212,0.308033580176089,0.532306030317022,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.719489830333259,0.274537029736055,0.589062011728432,0.202182481573316,0,0.421258456238981,0,0,0,0.409499734223957,3.11091950298168,0,0.551365343546124,1.32687795048244,0,3.47265320560013,0,0,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0.354761064070598,1.89996871767898,1.64647446479951,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0,0,0.47748896947538,0,0.307160702099232,0,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0.933118762985422,0,0.179021174675609,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.769502585037971,0.227884111694002,0,0.179515288819544,0.1086473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|phase1_expression=2.36181893051724,5.56661362116556,1.55049844505568,3.00219895059391,1.34088328328186,0.872338524100369,0,1.26343974685366,3.65659879479774,0.245733936501509,0,0,0.527533956456907,0.866364470720326,0.994192127183747,0.672325146451775,0.602694528023977,0.730310090387373,0,0.369363174230364,0.612002073732759,1.25381888591235,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.868043482863407,0.895661896959697,0.32389366601898,0.257575567634187,1.30858414901608,1.13362783106643,1.4555043671269,0.929716147622738,0.411167888021826,0.309706370895104,1.43846196161075,0.512321413058201,0,0.689491361473237,0,1.35426486594342,1.88242339542605,1.09162460023138,0.449446968890169,0.918251677112708,0,0,1.9791078011203,0.598390972864896,0.852449501065388,0.290209238628584,0,0.622822248995575,0.75374599577023,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0.336985893439485,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.722878304769133,1.00267582127178,1.44846518960824,0.795285947051099,4.86634870302636,0,0.221729397462564,0.351339142772504,0.130979075497713,0,0,0.97364218096405,0.348259474598534,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,0.926864265692532,6.88407889797153,0.709336764396714,0.560677600142307,1.06748995729705,0.24666754841716,0,0.269421344139376,0.653847612453835,1.36221684880438,2.88087962239999,0.468642863667593,0.936480230490962,0,0.149448680551801,0,0.323745888736263,0,0,0.368502951935304,0.826606249406124,0,2.22540236350701,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0.600952235626387,0.113432183160021,1.79389635688862,2.56268866582281,3.17897851739343,1.50045548042201,0.92747276314595,3.09168648054755,1.8611685633159,2.53164498361899,0.876933046450788,2.01947019395292,1.01254888506529,1.77810662500693,3.19508633264953,0.403008392910561,0.508681776931463,0.386521706326594,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0.643240938192885,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0.474541238222193,0,0.196221465125346,0,0,1.40241773803446,0.4115740113314,1.47008711385542,2.53510069643662,0.982827216677626,1.18157981336281,0,0.245976877086227,0,0.109750285408626,0,0,0,0.977424915930974,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.308482478109971,0,0.571652865261156,0.224262168690721,0,0.07333828582095,0.646358578788889,3.57656445851882,0,1.06375246633948,3.12022310734098,0.514414748524284,0,0,0.285955987316295,3.25572963234866,1.64648067356154,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,1.2162378064119,2.51128545716063,10.5416969741516,0.479249710983165,0,1.42636905040718,1.01346914667305,1.64381058040307,0.716243852959582,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,1.24900292158013,1.41932173530541,0.819989904948992,0,0,0,0,0,0.781952530212746,1.37060810223918,1.71571711905428,0.620304078368662,0.215714200818617,0,0,0,0,2.97729369382532,2.30192959932094,5.3325417942284,2.17836553734692,2.04682899626681,4.66476371316462,2.96836132889982,0.462629081407967,0.710246901252508,0.657017248110473,0.519254429183621,0.813472649219715,0.362578348774867,0.200506470303285,0.0920809889358963,0.459257792658427,1.27463817604702,2.62248829918848,0,0,0,1.46139224653261,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0.48335359146061,0.154048617114644,0.15350367472613,0.275673144969061,0.429680979473094,0.145016693914229,0,0.445160178233687,0,0,0,0.10115778085555,1.39453664789186,5.66662224295152,1.3940745403212,0.308033580176089,0.532306030317022,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.719489830333259,0.274537029736055,0.589062011728432,0.202182481573316,0,0.421258456238981,0,0,0,0.409499734223957,3.11091950298168,0,0.551365343546124,1.32687795048244,0,3.47265320560013,0,0,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0.354761064070598,1.89996871767898,1.64647446479951,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0,0,0.47748896947538,0,0.307160702099232,0,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0.933118762985422,0,0.179021174675609,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.769502585037971,0.227884111694002,0,0.179515288819544,0.1086473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| ||
|short_description=p@chr12:57605894..57605910,+ | |short_description=p@chr12:57605894..57605910,+ | ||
}} | }} |
Latest revision as of 10:37, 24 July 2015
Short description: | p@chr12:57605894..57605910, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57605894..57605910, + |
Coexpression cluster: | C1365_Fibroblast_Adipocyte_Preadipocyte_Smooth_Chondrocyte_Mesenchymal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.19e-14 | 427 |
somatic stem cell | 6.78e-14 | 433 |
connective tissue cell | 7.01e-14 | 361 |
stem cell | 2.90e-13 | 441 |
mesenchymal cell | 3.53e-13 | 354 |
fibroblast | 1.21e-11 | 76 |
motile cell | 5.58e-11 | 386 |
fat cell | 7.16e-10 | 15 |
skin fibroblast | 7.68e-09 | 23 |
preadipocyte | 2.17e-08 | 12 |
preadipocyte of the breast | 1.23e-07 | 3 |
omentum preadipocyte | 2.06e-07 | 3 |
adipocyte of omentum tissue | 9.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.75e-14 | 371 |
omentum | 1.74e-12 | 6 |
peritoneum | 1.74e-12 | 6 |
abdominal cavity | 1.74e-12 | 6 |
visceral peritoneum | 1.74e-12 | 6 |
cavity lining | 4.36e-10 | 12 |
serous membrane | 4.36e-10 | 12 |
adipose tissue | 1.21e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.78e-07 | 5 |
myotonic disease | 3.78e-07 | 5 |
muscle tissue disease | 3.78e-07 | 5 |
myopathy | 3.78e-07 | 5 |
muscular disease | 3.78e-07 | 5 |
myotonic dystrophy | 3.78e-07 | 5 |