FFCP PHASE1:Hg19::chr12:57572685..57572712,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:57572685..57572712,+ | |||
|coexpression_cluster_id=C1365 | |||
|description=CAGE_peak_at_chr12:57572685..57572712,+ | |description=CAGE_peak_at_chr12:57572685..57572712,+ | ||
|id=chr12:57572685..57572712,+ | |id=chr12:57572685..57572712,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.74e-15!75;CL:0000055!4.62e-13!180;CL:0000048!9.13e-10!430;CL:0002320!1.15e-09!365;CL:0000723!5.43e-09!436;CL:0000034!1.58e-08!444;CL:0000134!4.88e-08!358;CL:0002620!4.02e-07!23 | |ontology_enrichment_celltype=CL:0000057!1.74e-15!75;CL:0000055!4.62e-13!180;CL:0000048!9.13e-10!430;CL:0002320!1.15e-09!365;CL:0000723!5.43e-09!436;CL:0000034!1.58e-08!444;CL:0000134!4.88e-08!358;CL:0002620!4.02e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.12e-08;13!CL:0000499;1.08e-07;28!CL:0002334;3.12e-07;12!CL:0002620;3.61e-07;23!CL:0002320;4.46e-07;188!CL:0000153;5.36e-07;9!CL:0000447;5.36e-07;9!CL:0002580;7.84e-07;3!CL:0002615;9.94e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,3.25e-16,361;CL:0000057,2.95e-15,76;CL:0000134,4.20e-14,354;CL:0000219,1.40e-11,386;CL:0000048,1.68e-11,427;CL:0000136,4.19e-11,15;CL:0000723,4.88e-11,433;CL:0000034,1.93e-10,441;CL:0000499,7.19e-08,28;CL:0002620,1.86e-07,23;CL:0002334,3.47e-07,12;CL:0000153,5.12e-07,9;CL:0000447,5.12e-07,9;CL:0002580,7.09e-07,3;CL:0002615,8.59e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;5.65e-07;3!DOID:127;5.65e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.82e-07,3;DOID:127,4.82e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.57e-09!659;UBERON:0002384!4.50e-09!375;UBERON:0002204!1.82e-07!167;UBERON:0000062!1.84e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.72e-13;9!UBERON:0000042;2.72e-13;9!UBERON:0003688;1.15e-11;6!UBERON:0002358;1.15e-11;6!UBERON:0003684;1.15e-11;6!UBERON:0001178;1.15e-11;6!UBERON:0001013;3.43e-09;14!UBERON:0002384;7.61e-08;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.74e-16,371;UBERON:0003688,1.78e-11,6;UBERON:0002358,1.78e-11,6;UBERON:0003684,1.78e-11,6;UBERON:0001178,1.78e-11,6;UBERON:0004457,2.43e-09,12;UBERON:0000042,2.43e-09,12;UBERON:0001013,5.35e-09,14 | |||
|phase1_expression=2.18014055124668,9.20632252731228,2.53717927372748,3.00219895059391,2.68176656656373,5.23403114460221,0,1.89515962028049,3.13422753839806,0,0,0,0.527533956456907,0.37129905888014,1.98838425436749,0.672325146451775,0,0.730310090387373,0.487932798790507,0.246242116153576,1.22400414746552,0.313454721478088,0,0.273748850145768,0,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.401088894940283,0.868043482863407,0.447830948479849,0,0.257575567634187,1.01778767145695,1.13362783106643,0.727752183563449,0.464858073811369,0.411167888021826,0.929119112685311,0.28769239232215,0.768482119587302,0.236482229888585,1.37898272294647,0.645484683583826,1.35426486594342,1.88242339542605,0.545812300115692,0.449446968890169,0.918251677112708,0,0,0.989553900560148,0.199463657621632,0,0.580418477257168,0,0,0.75374599577023,0,0.217188844705117,1.21079900526674,0,0,0.211255286311942,0.637812899895131,0.628975936525128,0.44931452458598,0.600707571366025,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,0.12786256184353,1.0843174571537,0,2.75208386025565,1.5905718941022,2.91980922181582,0.189069634328136,0,0.087834785693126,0.196468613246569,0,0,0,0,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.759783069987479,1.32409180813219,7.45775213946916,1.06400514659507,1.12135520028461,0,0.98667019366864,0,0,0.163461903113459,1.21085942115945,2.30470369792,0.234321431833797,0.312160076830321,0,1.79338416662161,0.117434498643765,0.161872944368132,0,0,0.245668634623536,1.13658359293342,0,2.71993622206413,0.910161361938026,0.718618141816238,0.336672227908132,0,0.277064115484183,0.438977620880838,1.22595118319608,1.05166641234618,0.113432183160021,3.94657198515496,1.70845911054854,2.54318281391474,1.80054657650641,0.721367704669072,3.86460810068444,2.23340227597908,0.843881661206331,1.07180705677318,1.7670364197088,0.920498986422993,1.77810662500693,3.19508633264953,0.503760491138201,0.508681776931463,0,0.272746120590835,0,0.243947412259191,0,0.116193942869518,0.621966330092223,0,0,0,1.28648187638577,0,1.85747171212792,0.721879481669586,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,1.6462960453256,1.47008711385542,1.26755034821831,1.96565443335525,0.590789906681404,0,0,0.343135620597051,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0.984868024349589,0.936017060556951,0.297262324577456,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0.285826432630578,0.224262168690721,0,0,0.129271715757778,3.57656445851882,0,2.39344304926383,2.08014873822732,0.257207374262142,0,0.266422179016099,0.57191197463259,1.62786481617433,0,0,0.710783897485092,0,0.904318131178758,0.871533458600294,0.699810938274399,2.43247561282381,1.00451418286425,2.10833939483032,1.19812427745791,5.7430967917057,0,0.868687840005475,2.26023954805422,0.358121926479791,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.858840442033979,0.500170521059677,1.89885516589815,2.49565033836969,2.3195768543631,0.946214490203608,1.40569697991256,0.300946099727719,2.27407504055985,0,0,0.553107505625109,1.56390506042549,2.15381273209015,2.74514739048685,0.206768026122887,0.215714200818617,0,0.303127571446259,0,0.907170879989041,2.23297027036899,2.76231551918512,6.73584226639377,3.07533958213682,1.02341449813341,4.82561763430822,2.96836132889982,0.616838775210622,0.710246901252508,0.164254312027618,0.519254429183621,0.232420756919918,0,1.00253235151642,0,0.803701137152247,1.63882051206045,1.44236856455367,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.656029291399411,0,0.309123034943167,0,0.082509499920588,0,0,3.21367859688319,0.773365746336976,0.154048617114644,0.307007349452259,0.137836572484531,0.214840489736547,0.870100163485371,0.340906509664404,0.445160178233687,0.330569830721956,0,0.255225424989168,0.10115778085555,0,2.83331112147576,0,0,0,0,0,0,0,0.316379424718726,0.762520775695299,0,0.855877976067841,0,0,0.179872457583315,0.54907405947211,0.942499218765491,0,3.17020642346017,0.421258456238981,0.48763373908959,0.731140468893853,0,0.409499734223957,1.97967604735198,0,0,0.66343897524122,0.876901770507525,2.31510213706675,0.655894752046633,0.202910376962704,0,0.563391205064483,0.143411352204052,0.196498082026242,0.35667105148125,0.709522128141196,2.11107635297664,5.26871828735843,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0.568272293612826,0.47748896947538,0.296964680832639,0.307160702099232,0,0.281338832821026,0.445234820091624,0.16480387422676,0.211125408127993,1.39473591775749,0.276283915531148,0,0,0,2.17727711363265,0,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.482385754501632,0,0.995213339381022,0.886642856860642,0,0,0,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| ||
|short_description=p@chr12:57572685..57572712,+ | |short_description=p@chr12:57572685..57572712,+ | ||
}} | }} |
Latest revision as of 10:35, 24 July 2015
Short description: | p@chr12:57572685..57572712, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57572685..57572712, + |
Coexpression cluster: | C1365_Fibroblast_Adipocyte_Preadipocyte_Smooth_Chondrocyte_Mesenchymal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 3.25e-16 | 361 |
fibroblast | 2.95e-15 | 76 |
mesenchymal cell | 4.20e-14 | 354 |
motile cell | 1.40e-11 | 386 |
multi fate stem cell | 1.68e-11 | 427 |
fat cell | 4.19e-11 | 15 |
somatic stem cell | 4.88e-11 | 433 |
stem cell | 1.93e-10 | 441 |
stromal cell | 7.19e-08 | 28 |
skin fibroblast | 1.86e-07 | 23 |
preadipocyte | 3.47e-07 | 12 |
GAG secreting cell | 5.12e-07 | 9 |
carbohydrate secreting cell | 5.12e-07 | 9 |
preadipocyte of the breast | 7.09e-07 | 3 |
adipocyte of omentum tissue | 8.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.74e-16 | 371 |
omentum | 1.78e-11 | 6 |
peritoneum | 1.78e-11 | 6 |
abdominal cavity | 1.78e-11 | 6 |
visceral peritoneum | 1.78e-11 | 6 |
cavity lining | 2.43e-09 | 12 |
serous membrane | 2.43e-09 | 12 |
adipose tissue | 5.35e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.82e-07 | 3 |
leiomyoma | 4.82e-07 | 3 |