FFCP PHASE1:Hg19::chr12:57572239..57572259,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:57572239..57572259,+ | |||
|coexpression_cluster_id=C1365 | |||
|description=CAGE_peak_at_chr12:57572239..57572259,+ | |description=CAGE_peak_at_chr12:57572239..57572259,+ | ||
|id=chr12:57572239..57572259,+ | |id=chr12:57572239..57572259,+ | ||
|ontology_enrichment_celltype=CL:0000057!2.64e-15!75;CL:0000055!5.80e-15!180 | |ontology_enrichment_celltype=CL:0000057!2.64e-15!75;CL:0000055!5.80e-15!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.14e-09;23!CL:0000136;1.50e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.35e-17,76;CL:0002320,1.66e-11,361;CL:0000136,1.74e-10,15;CL:0000048,2.15e-10,427;CL:0000723,7.48e-10,433;CL:0000134,8.55e-10,354;CL:0002620,3.15e-09,23;CL:0000034,3.68e-09,441;CL:0000219,1.07e-08,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;3.99e-07;5!DOID:450;3.99e-07;5!DOID:66;3.99e-07;5!DOID:423;3.99e-07;5!DOID:0080000;3.99e-07;5!DOID:11722;3.99e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.46e-07,5;DOID:450,2.46e-07,5;DOID:66,2.46e-07,5;DOID:423,2.46e-07,5;DOID:0080000,2.46e-07,5;DOID:11722,2.46e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000468!6.11e-08!659;UBERON:0002384!9.49e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.80e-09;9!UBERON:0000042;2.80e-09;9!UBERON:0003688;3.17e-08;6!UBERON:0002358;3.17e-08;6!UBERON:0003684;3.17e-08;6!UBERON:0001178;3.17e-08;6!UBERON:0001013;1.13e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.62e-11,371;UBERON:0003688,1.39e-08,6;UBERON:0002358,1.39e-08,6;UBERON:0003684,1.39e-08,6;UBERON:0001178,1.39e-08,6;UBERON:0001013,1.21e-07,14;UBERON:0002199,3.95e-07,46;UBERON:0002416,3.95e-07,46;UBERON:0003102,7.82e-07,99 | |||
|phase1_expression=1.63510541343501,10.4909256706582,1.9733616573436,5.00366491765652,4.46961094427288,5.23403114460221,0,1.26343974685366,3.65659879479774,0,0,0,0.263766978228454,1.60896258848061,1.98838425436749,0.672325146451775,1.20538905604795,0.730310090387373,1.46379839637152,0.123121058076788,0.408001382488506,1.25381888591235,0.572471974262113,0.410623275218653,0.251085279189606,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,1.08505435357926,0.447830948479849,0.971680998056939,0.257575567634187,2.03557534291391,0.755751887377619,0.970336244751265,2.09186133215116,1.23350366406548,0.309706370895104,1.43846196161075,0.768482119587302,0.47296445977717,1.03423704220986,0,0,1.12945403725563,0.818718450173537,0.449446968890169,0.918251677112708,0,0.639337125799041,1.9791078011203,0.797854630486527,0.426224750532694,3.19230162491442,0,0.622822248995575,1.50749199154046,0.521482918420201,0.65156653411535,1.81619850790011,0,0,0,0,0.209658645508376,0.44931452458598,0.450530678524519,0.16072558669708,0.570025487482497,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,0,0.722878304769133,0.50133791063589,2.31754430337318,1.5905718941022,5.83961844363163,0,0.665188192387692,0,0.327447688744282,0,0,0.324547393654683,0,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.633152558322899,1.72131935057184,9.75244510545967,2.12801029319014,0.560677600142307,1.06748995729705,1.72667283892012,0.622422070799533,0,0.490385709340376,0.454072282934794,1.15235184896,0.234321431833797,1.24864030732128,0,0.597794722207204,0,0.161872944368132,0,1.42907919878425,1.10550885580591,1.75653827998801,1.18800285728205,2.71993622206413,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0.877955241761676,0.30648779579902,1.80285670687916,0,5.38168907066586,1.92201649936711,2.7551147150743,3.00091096084402,2.26715564324566,3.60696756063881,1.30281799432113,1.35021065793013,1.07180705677318,3.78650661366172,1.47279837827679,3.07127507955743,4.26011511019937,0.302256294682921,0.67824236924195,0,0.272746120590835,0,0.487894824518382,0,0.580969714347592,0.414644220061482,0.504641701751257,0.36497735907583,1.56449532329816,1.28648187638577,0,1.39310378409594,0.721879481669586,0,0,0,0.330881918197182,0,0,0.134831308160164,0,0,0,0,0.4115740113314,4.41026134156626,3.80265104465493,2.94848165003288,0.590789906681404,0,0.368965315629341,0.514703430895577,0,0,0.100528972411631,0.0925884451585296,0.651616610620649,3.11980435583874,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0.492434012174795,0.234004265139238,0.743155811443641,0,0.16798212819886,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.126995788584338,1.14596527667483,1.17217447210047,3.4214489204541,0.308482478109971,0.300343057843917,1.14330573052231,0,1.30788020649984,0.07333828582095,0.904902010304444,7.15312891703765,0,1.59562869950922,2.08014873822732,0.257207374262142,0,0.266422179016099,0.285955987316295,4.88359444852299,0,0,0.355391948742546,0.791951872933429,1.50719688529793,0,1.3996218765488,0,2.51128545716063,6.32501818449095,0.718874566474748,1.14861935834114,1.42636905040718,0.434343920002738,3.28762116080613,1.43248770591916,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.34960640891054,0.500170521059677,1.62759014219841,1.66376689224646,4.46072471992904,2.68094105557689,2.45996971484698,0.601892199455438,2.27407504055985,1.03473071292505,0.664225598535437,0.184369168541703,0.955719759148911,0.783204629850962,3.43143423810856,0.206768026122887,0.431428401637234,0.426910231213777,0,1.66435439510497,1.20956117331872,3.2254015016441,2.76231551918512,11.507063871756,2.56278298511402,1.53512174720011,7.23842645146234,2.96836132889982,1.07946785661859,0.710246901252508,0.164254312027618,0.519254429183621,0.348631135379878,0.483437798366489,1.60405176242628,0.0920809889358963,0.459257792658427,3.64182336013434,3.01586154406675,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0.183138929636687,0,0,0,4.82051789532479,0.096670718292122,0,0.460511024178389,0.275673144969061,0.214840489736547,2.0302337147992,0.340906509664404,0.890320356467374,0,0,0.127612712494584,0,0,6.2962469366128,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0,1.14378116354295,0.255897791311334,0.855877976067841,0.318203247925937,0.78494864019923,0.359744915166629,1.37268514868027,0.471249609382746,0,0,0,0,0.731140468893853,0,0.545999645631943,3.53513579884282,4.52032466480971,0.551365343546124,1.99031692572366,0,4.05142873986681,0,0.202910376962704,0,0.281695602532241,0,0.196498082026242,0,1.06428319221179,3.37772216476263,3.95153871551882,0.379473173765715,1.39973888097993,0,0,0,0.659006605437454,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,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| ||
|short_description=p@chr12:57572239..57572259,+ | |short_description=p@chr12:57572239..57572259,+ | ||
}} | }} |
Latest revision as of 10:35, 24 July 2015
Short description: | p@chr12:57572239..57572259, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57572239..57572259, + |
Coexpression cluster: | C1365_Fibroblast_Adipocyte_Preadipocyte_Smooth_Chondrocyte_Mesenchymal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.35e-17 | 76 |
connective tissue cell | 1.66e-11 | 361 |
fat cell | 1.74e-10 | 15 |
multi fate stem cell | 2.15e-10 | 427 |
somatic stem cell | 7.48e-10 | 433 |
mesenchymal cell | 8.55e-10 | 354 |
skin fibroblast | 3.15e-09 | 23 |
stem cell | 3.68e-09 | 441 |
motile cell | 1.07e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.62e-11 | 371 |
omentum | 1.39e-08 | 6 |
peritoneum | 1.39e-08 | 6 |
abdominal cavity | 1.39e-08 | 6 |
visceral peritoneum | 1.39e-08 | 6 |
adipose tissue | 1.21e-07 | 14 |
integument | 3.95e-07 | 46 |
integumental system | 3.95e-07 | 46 |
surface structure | 7.82e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.46e-07 | 5 |
myotonic disease | 2.46e-07 | 5 |
muscle tissue disease | 2.46e-07 | 5 |
myopathy | 2.46e-07 | 5 |
muscular disease | 2.46e-07 | 5 |
myotonic dystrophy | 2.46e-07 | 5 |