FFCP PHASE1:Hg19::chr12:57569576..57569614,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:57569576..57569614,+ | |||
|description=CAGE_peak_at_chr12:57569576..57569614,+ | |description=CAGE_peak_at_chr12:57569576..57569614,+ | ||
|id=chr12:57569576..57569614,+ | |id=chr12:57569576..57569614,+ | ||
|ontology_enrichment_celltype=CL:0000575!3.63e-10!2;CL:0002076!2.83e-08!43;CL:0002251!7.44e-07!21;CL:0000223!9.63e-07!59 | |ontology_enrichment_celltype=CL:0000575!3.63e-10!2;CL:0002076!2.83e-08!43;CL:0002251!7.44e-07!21;CL:0000223!9.63e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000123;5.15e-21;2!CL:0000242;5.15e-21;2!CL:0000312;3.10e-09;5!CL:0000240;6.55e-08;6!CL:0000311;6.55e-08;6!CL:0000079;6.55e-08;6!CL:0000237;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,6.96e-21,2;CL:0000312,3.49e-09,5;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;6.55e-08;6!CL:0000114;6.55e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!9.61e-19!14 | |ontology_enrichment_disease=DOID:1749!9.61e-19!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.18e-12;14!DOID:4362;3.10e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.24e-12,14;DOID:4362,2.97e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.69e-13!72;UBERON:0000065!4.24e-11!53;UBERON:0003343!2.18e-10!4;UBERON:0004785!2.18e-10!4;UBERON:0000344!1.37e-08!12;UBERON:0003729!2.14e-08!5;UBERON:0005157!2.48e-08!51;UBERON:0004119!5.39e-08!169;UBERON:0000925!5.39e-08!169;UBERON:0006595!5.39e-08!169;UBERON:0005178!3.99e-07!34;UBERON:0002224!3.99e-07!34;UBERON:0000974!5.98e-07!10;UBERON:0005181!6.92e-07!35;UBERON:0000166!8.98e-07!21;UBERON:0002048!9.77e-07!22;UBERON:0000117!9.77e-07!22;UBERON:0000171!9.77e-07!22;UBERON:0000170!9.77e-07!22;UBERON:0005597!9.77e-07!22;UBERON:0000118!9.77e-07!22 | |ontology_enrichment_uberon=UBERON:0001004!1.69e-13!72;UBERON:0000065!4.24e-11!53;UBERON:0003343!2.18e-10!4;UBERON:0004785!2.18e-10!4;UBERON:0000344!1.37e-08!12;UBERON:0003729!2.14e-08!5;UBERON:0005157!2.48e-08!51;UBERON:0004119!5.39e-08!169;UBERON:0000925!5.39e-08!169;UBERON:0006595!5.39e-08!169;UBERON:0005178!3.99e-07!34;UBERON:0002224!3.99e-07!34;UBERON:0000974!5.98e-07!10;UBERON:0005181!6.92e-07!35;UBERON:0000166!8.98e-07!21;UBERON:0002048!9.77e-07!22;UBERON:0000117!9.77e-07!22;UBERON:0000171!9.77e-07!22;UBERON:0000170!9.77e-07!22;UBERON:0005597!9.77e-07!22;UBERON:0000118!9.77e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.81e-40;1!UBERON:0006518;1.81e-40;1!UBERON:0008949;1.81e-40;1!UBERON:0000101;1.81e-40;1!UBERON:0002167;1.81e-40;1!UBERON:0003343;2.53e-11;4!UBERON:0004785;2.53e-11;4!UBERON:0000974;5.54e-08;6!UBERON:0000002;6.55e-08;6!UBERON:0001560;6.55e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,9.91e-41,1;UBERON:0006518,9.91e-41,1;UBERON:0008949,9.91e-41,1;UBERON:0000101,9.91e-41,1;UBERON:0002167,9.91e-41,1;UBERON:0003343,2.53e-11,4;UBERON:0004785,2.53e-11,4;UBERON:0000002,6.34e-08,6;UBERON:0001560,6.34e-08,6 | |||
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| ||
|short_description=p@chr12:57569576..57569614,+ | |short_description=p@chr12:57569576..57569614,+ | ||
}} | }} |
Latest revision as of 10:34, 24 July 2015
Short description: | p@chr12:57569576..57569614, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57569576..57569614, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 6.96e-21 | 2 |
keratinocyte | 3.49e-09 | 5 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 9.91e-41 | 1 |
right lung lobe | 9.91e-41 | 1 |
lower lobe of lung | 9.91e-41 | 1 |
lobe of lung | 9.91e-41 | 1 |
right lung | 9.91e-41 | 1 |
mucosa of oral region | 2.53e-11 | 4 |
respiratory system mucosa | 2.53e-11 | 4 |
uterine cervix | 6.34e-08 | 6 |
neck of organ | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.24e-12 | 14 |
cervical cancer | 2.97e-09 | 5 |