FFCP PHASE1:Hg19::chr12:56347918..56347929,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_ENST00000554053_5end | |||
|cluster_id=chr12:56347918..56347929,- | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_1_at_ENST00000554053_5end | |||
|id=chr12:56347918..56347929,- | |||
|ontology_enrichment_celltype=CL:0000147!6.11e-50!14;CL:0000149!1.17e-44!4;CL:0002586!8.46e-34!3;CL:0000148!5.97e-28!10;CL:0000541!5.97e-28!10;CL:0000325!1.95e-17!39;CL:0000710!5.66e-14!20;CL:0002566!1.25e-12!1;CL:0000075!2.50e-10!27;CL:0002077!1.98e-08!33;CL:0002575!9.02e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000148;8.42e-53;10!CL:0000147;5.71e-38;14!CL:0002566;5.97e-34;1!CL:0000710;8.01e-27;20!CL:0000075;4.63e-20;27!CL:0002077;1.34e-14;34!CL:0002567;2.07e-12;3!CL:0000149;1.50e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,9.01e-53,10;CL:0000541,9.01e-53,10;CL:0000147,5.99e-38,14;CL:0002566,9.85e-34,1;CL:0000710,8.28e-27,20;CL:0000075,4.75e-20,27;CL:0002077,4.61e-16,34;CL:0000333,7.84e-13,41;CL:0002567,2.07e-12,3;CL:0000149,1.57e-09,4;CL:0000133,3.28e-09,59;CL:0000221,1.11e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.74e-12;3 | |||
|ontology_enrichment_disease=DOID:1909!1.59e-23!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;5.48e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.48e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!7.37e-36!5;UBERON:0005388!7.37e-36!5;UBERON:0001802!7.37e-36!5;UBERON:0001781!8.46e-34!3;UBERON:0001782!8.46e-34!3;UBERON:0005424!8.46e-34!3;UBERON:0000970!7.64e-14!20;UBERON:0002104!3.51e-13!21;UBERON:0000020!4.98e-12!23;UBERON:0001032!1.59e-11!24;UBERON:0004456!1.59e-11!24;UBERON:0007625!1.12e-09!11;UBERON:0000019!1.19e-09!19;UBERON:0000047!1.19e-09!19;UBERON:0004088!1.19e-09!19;UBERON:0003072!1.19e-09!19;UBERON:0003071!1.19e-09!19;UBERON:0004128!1.19e-09!19;UBERON:0001456!9.49e-09!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;6.78e-08;5!UBERON:0005388;6.78e-08;5!UBERON:0001802;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07946420296687,0,0,3.4214489204541,0.102827492703324,1.20137223137567,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,35.397701359576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28657779517981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000554053 | |||
}} |
Latest revision as of 10:15, 24 July 2015
Short description: | p1@ENST00000554053 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000554053_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | -34bp_to_ENST00000554053_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 9.01e-53 | 10 |
melanoblast | 9.01e-53 | 10 |
pigment cell | 5.99e-38 | 14 |
dark melanocyte | 9.85e-34 | 1 |
neurecto-epithelial cell | 8.28e-27 | 20 |
columnar/cuboidal epithelial cell | 4.75e-20 | 27 |
ecto-epithelial cell | 4.61e-16 | 34 |
migratory neural crest cell | 7.84e-13 | 41 |
light melanocyte | 2.07e-12 | 3 |
visual pigment cell | 1.57e-09 | 4 |
neurectodermal cell | 3.28e-09 | 59 |
ectodermal cell | 1.11e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
retina | 8.48e-07 | 6 |
photoreceptor array | 8.48e-07 | 6 |
posterior segment of eyeball | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.48e-18 | 2 |