FFCP PHASE1:Hg19::chr12:54374262..54374266,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:54374262..54374266,+ | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_at_chr12:54374262..54374266,+ | |description=CAGE_peak_at_chr12:54374262..54374266,+ | ||
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|ontology_enrichment_celltype=CL:0002150!4.84e-22!3;CL:0000861!4.84e-22!3;CL:0000214!2.54e-11!3;CL:0000135!4.43e-11!3;CL:0000386!4.43e-11!3;CL:0000388!4.43e-11!3;CL:0000153!3.94e-08!9;CL:0000447!3.94e-08!9;CL:0000235!5.46e-07!10;CL:0000499!7.66e-07!27 | |ontology_enrichment_celltype=CL:0002150!4.84e-22!3;CL:0000861!4.84e-22!3;CL:0000214!2.54e-11!3;CL:0000135!4.43e-11!3;CL:0000386!4.43e-11!3;CL:0000388!4.43e-11!3;CL:0000153!3.94e-08!9;CL:0000447!3.94e-08!9;CL:0000235!5.46e-07!10;CL:0000499!7.66e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000214;3.66e-23;3!CL:0002551;2.59e-12;6!CL:0000153;1.16e-08;9!CL:0000447;1.16e-08;9 | |ontology_enrichment_celltype_v019=CL:0000214;3.66e-23;3!CL:0002551;2.59e-12;6!CL:0000153;1.16e-08;9!CL:0000447;1.16e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000214,3.27e-23,3;CL:0002551,2.74e-12,6;CL:0000153,1.12e-08,9;CL:0000447,1.12e-08,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006915!2.54e-11!3;UBERON:0002018!2.54e-11!3;UBERON:0002217!2.54e-11!3;UBERON:0007616!2.54e-11!3;UBERON:0000043!4.43e-11!3;UBERON:0007029!3.87e-09!1;UBERON:0004905!4.00e-07!5;UBERON:0000982!4.00e-07!5;UBERON:0004770!4.00e-07!5 | |ontology_enrichment_uberon=UBERON:0006915!2.54e-11!3;UBERON:0002018!2.54e-11!3;UBERON:0002217!2.54e-11!3;UBERON:0007616!2.54e-11!3;UBERON:0000043!4.43e-11!3;UBERON:0007029!3.87e-09!1;UBERON:0004905!4.00e-07!5;UBERON:0000982!4.00e-07!5;UBERON:0004770!4.00e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;3.66e-23;3!UBERON:0007616;3.66e-23;3!UBERON:0002217;3.66e-23;3!UBERON:0002018;3.66e-23;3!UBERON:0004905;1.41e-09;8!UBERON:0000982;1.41e-09;8!UBERON:0004770;1.41e-09;8!UBERON:0004457;1.16e-08;9!UBERON:0000042;1.16e-08;9!UBERON:0002067;1.16e-08;9!UBERON:0000486;8.14e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0006915;3.66e-23;3!UBERON:0007616;3.66e-23;3!UBERON:0002217;3.66e-23;3!UBERON:0002018;3.66e-23;3!UBERON:0004905;1.41e-09;8!UBERON:0000982;1.41e-09;8!UBERON:0004770;1.41e-09;8!UBERON:0004457;1.16e-08;9!UBERON:0000042;1.16e-08;9!UBERON:0002067;1.16e-08;9!UBERON:0000486;8.14e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,3.27e-23,3;UBERON:0007616,3.27e-23,3;UBERON:0002217,3.27e-23,3;UBERON:0002018,3.27e-23,3;UBERON:0004905,1.35e-09,8;UBERON:0000982,1.35e-09,8;UBERON:0004770,1.35e-09,8;UBERON:0002067,1.21e-08,9;UBERON:0004016,1.21e-08,9;UBERON:0010083,1.21e-08,9;UBERON:0004457,7.92e-07,12;UBERON:0000042,7.92e-07,12 | |||
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|short_description=p@chr12:54374262..54374266,+ | |short_description=p@chr12:54374262..54374266,+ | ||
}} | }} |
Latest revision as of 09:56, 24 July 2015
Short description: | p@chr12:54374262..54374266, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:54374262..54374266, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 3.27e-23 | 3 |
fibroblast of dermis | 2.74e-12 | 6 |
GAG secreting cell | 1.12e-08 | 9 |
carbohydrate secreting cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 3.27e-23 | 3 |
layer of synovial tissue | 3.27e-23 | 3 |
synovial joint | 3.27e-23 | 3 |
synovial membrane of synovial joint | 3.27e-23 | 3 |
articulation | 1.35e-09 | 8 |
skeletal joint | 1.35e-09 | 8 |
articular system | 1.35e-09 | 8 |
dermis | 1.21e-08 | 9 |
dermatome | 1.21e-08 | 9 |
future dermis | 1.21e-08 | 9 |
cavity lining | 7.92e-07 | 12 |
serous membrane | 7.92e-07 | 12 |