FFCP PHASE1:Hg19::chr12:53004452..53004463,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53004452..53004463,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_at_chr12:53004452..53004463,+ | |description=CAGE_peak_at_chr12:53004452..53004463,+ | ||
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|ontology_enrichment_celltype=CL:0000791!5.10e-50!18;CL:0000789!5.10e-50!18;CL:0002420!5.10e-50!18;CL:0002419!5.10e-50!18;CL:0000790!5.10e-50!18;CL:0000084!3.82e-35!25;CL:0000827!3.82e-35!25;CL:0000625!3.59e-34!11;CL:0000624!1.62e-20!6;CL:0000838!3.37e-20!52;CL:0000542!9.47e-20!53;CL:0000051!9.47e-20!53;CL:0000842!1.09e-15!3;CL:0000898!1.32e-15!3;CL:0000224!6.86e-12!4;CL:0002087!1.43e-11!119;CL:0000815!7.36e-11!2;CL:0000792!7.36e-11!2;CL:0002677!7.36e-11!2;CL:0000738!2.46e-10!140;CL:0000080!4.54e-08!6;CL:0000037!1.39e-07!172;CL:0000566!1.39e-07!172;CL:0002031!2.27e-07!124;CL:0000623!4.01e-07!3;CL:0000825!4.01e-07!3;CL:0000988!6.30e-07!182 | |ontology_enrichment_celltype=CL:0000791!5.10e-50!18;CL:0000789!5.10e-50!18;CL:0002420!5.10e-50!18;CL:0002419!5.10e-50!18;CL:0000790!5.10e-50!18;CL:0000084!3.82e-35!25;CL:0000827!3.82e-35!25;CL:0000625!3.59e-34!11;CL:0000624!1.62e-20!6;CL:0000838!3.37e-20!52;CL:0000542!9.47e-20!53;CL:0000051!9.47e-20!53;CL:0000842!1.09e-15!3;CL:0000898!1.32e-15!3;CL:0000224!6.86e-12!4;CL:0002087!1.43e-11!119;CL:0000815!7.36e-11!2;CL:0000792!7.36e-11!2;CL:0002677!7.36e-11!2;CL:0000738!2.46e-10!140;CL:0000080!4.54e-08!6;CL:0000037!1.39e-07!172;CL:0000566!1.39e-07!172;CL:0002031!2.27e-07!124;CL:0000623!4.01e-07!3;CL:0000825!4.01e-07!3;CL:0000988!6.30e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000898;5.61e-30;3!CL:0000895;4.10e-23;1!CL:0000791;8.53e-20;18!CL:0000789;8.53e-20;18!CL:0002419;8.53e-20;18!CL:0000624;1.52e-15;6!CL:0000084;2.17e-14;25!CL:0000815;2.90e-12;2!CL:0000792;2.90e-12;2!CL:0002677;2.90e-12;2!CL:0000625;6.35e-09;11!CL:0000226;1.30e-08;3!CL:0000842;1.30e-08;3!CL:0000542;2.71e-07;53 | |ontology_enrichment_celltype_v019=CL:0000898;5.61e-30;3!CL:0000895;4.10e-23;1!CL:0000791;8.53e-20;18!CL:0000789;8.53e-20;18!CL:0002419;8.53e-20;18!CL:0000624;1.52e-15;6!CL:0000084;2.17e-14;25!CL:0000815;2.90e-12;2!CL:0000792;2.90e-12;2!CL:0002677;2.90e-12;2!CL:0000625;6.35e-09;11!CL:0000226;1.30e-08;3!CL:0000842;1.30e-08;3!CL:0000542;2.71e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000898,5.61e-30,3;CL:0000810,6.40e-23,1;CL:0000895,6.40e-23,1;CL:0002436,6.40e-23,1;CL:0002427,6.40e-23,1;CL:0002428,6.40e-23,1;CL:0002429,6.40e-23,1;CL:0002433,6.40e-23,1;CL:0002431,6.40e-23,1;CL:0002432,6.40e-23,1;CL:0000791,8.53e-20,18;CL:0000789,8.53e-20,18;CL:0002420,8.53e-20,18;CL:0002419,8.53e-20,18;CL:0000790,8.53e-20,18;CL:0000624,1.52e-15,6;CL:0000084,2.17e-14,25;CL:0000827,2.17e-14,25;CL:0000815,2.32e-12,2;CL:0000792,2.32e-12,2;CL:0002677,2.32e-12,2;CL:0000893,3.62e-12,2;CL:0002489,3.62e-12,2;CL:0000809,3.62e-12,2;CL:0000808,3.62e-12,2;CL:0000894,3.62e-12,2;CL:0000806,3.62e-12,2;CL:0000807,3.62e-12,2;CL:0000805,3.62e-12,2;CL:0002425,3.62e-12,2;CL:0000625,6.35e-09,11;CL:0000226,1.30e-08,3;CL:0000842,1.30e-08,3;CL:0000838,4.13e-07,52;CL:0000542,5.56e-07,53;CL:0000051,5.56e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002427;4.10e-23;1!CL:0000790;8.53e-20;18!CL:0002425;2.90e-12;2!CL:0000051;2.71e-07;53 | |ontology_enrichment_development_v019=CL:0002427;4.10e-23;1!CL:0000790;8.53e-20;18!CL:0002425;2.90e-12;2!CL:0000051;2.71e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.00e-16!7;UBERON:0000178!2.48e-15!15;UBERON:0000179!2.48e-15!15;UBERON:0000463!2.48e-15!15;UBERON:0002370!2.52e-11!4;UBERON:0005058!2.52e-11!4;UBERON:0009113!2.52e-11!4;UBERON:0003295!2.52e-11!4;UBERON:0005562!2.52e-11!4;UBERON:0003408!8.30e-08!10;UBERON:0003351!1.06e-07!6;UBERON:0001042!1.13e-07!10;UBERON:0009145!1.13e-07!10;UBERON:0006562!5.55e-07!11;UBERON:0002106!7.23e-07!3;UBERON:0004854!7.23e-07!3;UBERON:0009034!7.23e-07!3;UBERON:0002095!7.23e-07!3;UBERON:0004782!7.23e-07!3;UBERON:0003281!7.23e-07!3;UBERON:0009664!7.23e-07!3;UBERON:0002296!7.23e-07!3;UBERON:0005602!7.23e-07!3;UBERON:0001179!7.23e-07!3;UBERON:0006293!7.23e-07!3 | |ontology_enrichment_uberon=UBERON:0004177!2.00e-16!7;UBERON:0000178!2.48e-15!15;UBERON:0000179!2.48e-15!15;UBERON:0000463!2.48e-15!15;UBERON:0002370!2.52e-11!4;UBERON:0005058!2.52e-11!4;UBERON:0009113!2.52e-11!4;UBERON:0003295!2.52e-11!4;UBERON:0005562!2.52e-11!4;UBERON:0003408!8.30e-08!10;UBERON:0003351!1.06e-07!6;UBERON:0001042!1.13e-07!10;UBERON:0009145!1.13e-07!10;UBERON:0006562!5.55e-07!11;UBERON:0002106!7.23e-07!3;UBERON:0004854!7.23e-07!3;UBERON:0009034!7.23e-07!3;UBERON:0002095!7.23e-07!3;UBERON:0004782!7.23e-07!3;UBERON:0003281!7.23e-07!3;UBERON:0009664!7.23e-07!3;UBERON:0002296!7.23e-07!3;UBERON:0005602!7.23e-07!3;UBERON:0001179!7.23e-07!3;UBERON:0006293!7.23e-07!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr12:53004452..53004463,+ | |short_description=p@chr12:53004452..53004463,+ | ||
}} | }} |
Latest revision as of 09:39, 24 July 2015
Short description: | p@chr12:53004452..53004463, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53004452..53004463, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data