FFCP PHASE1:Hg19::chr12:52432402..52432424,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52432402..52432424,- | |||
|coexpression_cluster_id=C168 | |||
|description=CAGE_peak_at_chr12:52432402..52432424,- | |description=CAGE_peak_at_chr12:52432402..52432424,- | ||
|id=chr12:52432402..52432424,- | |id=chr12:52432402..52432424,- | ||
|ontology_enrichment_celltype=CL:0002057!2.05e-52!42;CL:0000860!5.40e-48!45;CL:0000839!8.91e-37!70;CL:0000557!4.72e-36!71;CL:0000766!2.68e-34!76;CL:0002194!2.27e-33!63;CL:0000576!2.27e-33!63;CL:0000040!2.27e-33!63;CL:0000559!2.27e-33!63;CL:0002009!6.13e-32!65;CL:0000763!1.18e-18!112;CL:0000049!1.18e-18!112;CL:0002031!2.02e-16!124;CL:0000738!1.56e-15!140;CL:0002087!2.69e-15!119;CL:0002393!5.45e-15!9;CL:0002397!5.45e-15!9;CL:0000037!4.24e-10!172;CL:0000566!4.24e-10!172;CL:0002032!1.05e-09!165;CL:0000837!1.05e-09!165;CL:0000988!7.63e-09!182;CL:0000134!3.26e-08!358;CL:0002320!4.33e-08!365 | |ontology_enrichment_celltype=CL:0002057!2.05e-52!42;CL:0000860!5.40e-48!45;CL:0000839!8.91e-37!70;CL:0000557!4.72e-36!71;CL:0000766!2.68e-34!76;CL:0002194!2.27e-33!63;CL:0000576!2.27e-33!63;CL:0000040!2.27e-33!63;CL:0000559!2.27e-33!63;CL:0002009!6.13e-32!65;CL:0000763!1.18e-18!112;CL:0000049!1.18e-18!112;CL:0002031!2.02e-16!124;CL:0000738!1.56e-15!140;CL:0002087!2.69e-15!119;CL:0002393!5.45e-15!9;CL:0002397!5.45e-15!9;CL:0000037!4.24e-10!172;CL:0000566!4.24e-10!172;CL:0002032!1.05e-09!165;CL:0000837!1.05e-09!165;CL:0000988!7.63e-09!182;CL:0000134!3.26e-08!358;CL:0002320!4.33e-08!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.22e-44;33!CL:0002057;2.22e-44;33!CL:0000576;6.95e-40;48!CL:0000473;1.42e-34;39!CL:0000234;1.42e-34;39!CL:0000766;7.23e-33;69!CL:0000097;5.26e-20;5!CL:0000875;7.47e-18;3!CL:0002396;7.47e-18;3!CL:0002393;9.61e-16;6!CL:0002397;9.61e-16;6!CL:0000763;5.50e-12;100!CL:0000163;3.54e-11;9!CL:0002087;1.66e-09;104!CL:0000738;5.05e-09;136!CL:0002581;4.46e-07;1!CL:0002591;4.46e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.19e-76,42;CL:0002057,1.19e-76,42;CL:0000473,1.81e-66,48;CL:0000234,1.81e-66,48;CL:0000839,1.34e-64,66;CL:0000557,1.43e-63,67;CL:0000766,7.43e-59,72;CL:0002194,3.29e-52,59;CL:0000576,3.29e-52,59;CL:0000040,3.29e-52,59;CL:0000559,3.29e-52,59;CL:0002009,2.28e-50,61;CL:0000763,1.19e-37,108;CL:0000049,1.19e-37,108;CL:0002031,2.22e-33,120;CL:0002393,1.57e-30,9;CL:0002397,1.57e-30,9;CL:0000738,7.58e-29,136;CL:0002087,1.22e-24,115;CL:0002032,1.49e-23,161;CL:0000837,1.49e-23,161;CL:0000037,2.38e-22,168;CL:0000988,6.10e-21,177;CL:0000097,5.15e-20,5;CL:0002028,5.15e-20,5;CL:0000875,5.76e-18,3;CL:0002396,5.76e-18,3;CL:0000134,2.27e-11,354;CL:0000163,3.50e-11,9;CL:0002320,4.93e-11,361;CL:0000219,7.55e-10,386;CL:0000048,2.99e-09,427;CL:0000723,4.88e-09,433;CL:0000034,9.19e-09,441;CL:0002581,3.85e-07,1;CL:0002591,6.20e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;6.56e-56;42!CL:0000049;1.94e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.11e-33!80;UBERON:0001474!2.80e-30!86;UBERON:0004765!1.52e-28!101;UBERON:0001434!1.52e-28!101;UBERON:0002390!4.74e-27!102;UBERON:0003061!4.74e-27!102;UBERON:0002193!2.99e-23!112;UBERON:0002405!6.94e-20!115;UBERON:0003081!1.55e-15!216;UBERON:0002204!2.89e-15!167;UBERON:0000062!3.06e-11!511;UBERON:0003080!1.69e-09!42;UBERON:0002780!1.16e-08!41;UBERON:0001890!1.16e-08!41;UBERON:0006240!1.16e-08!41;UBERON:0000467!1.30e-07!625;UBERON:0000480!1.48e-07!626;UBERON:0002384!2.25e-07!375;UBERON:0001049!2.97e-07!57;UBERON:0005068!2.97e-07!57;UBERON:0006241!2.97e-07!57;UBERON:0007135!2.97e-07!57;UBERON:0002346!4.19e-07!90;UBERON:0003075!4.37e-07!86;UBERON:0007284!4.37e-07!86;UBERON:0000468!4.53e-07!659;UBERON:0002616!7.82e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;4.46e-07;1!UBERON:0006518;4.46e-07;1!UBERON:0008949;4.46e-07;1!UBERON:0000101;4.46e-07;1!UBERON:0002167;4.46e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.60e-55,76;UBERON:0001474,4.01e-51,82;UBERON:0004765,3.69e-46,90;UBERON:0002405,1.63e-44,93;UBERON:0002390,5.37e-42,98;UBERON:0003061,5.37e-42,98;UBERON:0001434,4.66e-41,100;UBERON:0002193,1.19e-37,108;UBERON:0002204,2.14e-24,167;UBERON:0003081,1.01e-20,203;UBERON:0000926,2.20e-12,315;UBERON:0004120,2.20e-12,315;UBERON:0006603,2.20e-12,315;UBERON:0002384,1.42e-10,371;UBERON:0002171,3.21e-07,1;UBERON:0006518,3.21e-07,1;UBERON:0008949,3.21e-07,1;UBERON:0000101,3.21e-07,1;UBERON:0002167,3.21e-07,1 | |||
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|short_description=p@chr12:52432402..52432424,- | |short_description=p@chr12:52432402..52432424,- | ||
}} | }} |
Latest revision as of 09:26, 24 July 2015
Short description: | p@chr12:52432402..52432424, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52432402..52432424, - |
Coexpression cluster: | C168_Mast_CD14_immature_Basophils_Eosinophils_CD34_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.60e-55 | 76 |
bone element | 4.01e-51 | 82 |
skeletal element | 3.69e-46 | 90 |
immune system | 1.63e-44 | 93 |
hematopoietic system | 5.37e-42 | 98 |
blood island | 5.37e-42 | 98 |
skeletal system | 4.66e-41 | 100 |
hemolymphoid system | 1.19e-37 | 108 |
musculoskeletal system | 2.14e-24 | 167 |
lateral plate mesoderm | 1.01e-20 | 203 |
mesoderm | 2.20e-12 | 315 |
mesoderm-derived structure | 2.20e-12 | 315 |
presumptive mesoderm | 2.20e-12 | 315 |
connective tissue | 1.42e-10 | 371 |
lower lobe of right lung | 3.21e-07 | 1 |
right lung lobe | 3.21e-07 | 1 |
lower lobe of lung | 3.21e-07 | 1 |
lobe of lung | 3.21e-07 | 1 |
right lung | 3.21e-07 | 1 |