FFCP PHASE1:Hg19::chr12:50099795..50099808,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:50099795..50099808,- | |||
|description=CAGE_peak_at_chr12:50099795..50099808,- | |||
|id=chr12:50099795..50099808,- | |||
|ontology_enrichment_celltype=CL:0000451!5.67e-33!10;CL:0000990!6.01e-26!8;CL:0000557!2.66e-23!71;CL:0002009!1.43e-21!65;CL:0000839!1.77e-21!70;CL:0002194!3.75e-20!63;CL:0000576!3.75e-20!63;CL:0000040!3.75e-20!63;CL:0000559!3.75e-20!63;CL:0000738!6.19e-20!140;CL:0000766!2.44e-19!76;CL:0000763!8.58e-17!112;CL:0000049!8.58e-17!112;CL:0000840!3.40e-16!5;CL:0001029!3.40e-16!5;CL:0002057!5.21e-16!42;CL:0002031!1.16e-15!124;CL:0000037!1.00e-14!172;CL:0000566!1.00e-14!172;CL:0000860!1.07e-14!45;CL:0000988!1.77e-13!182;CL:0002032!3.06e-13!165;CL:0000837!3.06e-13!165;CL:0002087!1.31e-12!119;CL:0000784!2.32e-12!3;CL:0000453!3.95e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0000451;1.50e-79;10!CL:0000840;1.11e-74;5!CL:0000784;1.50e-54;3!CL:0000990;6.22e-50;8!CL:0001014;2.48e-10;2!CL:0001016;2.48e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000451,2.14e-79,10;CL:0000840,1.11e-74,5;CL:0001029,1.11e-74,5;CL:0000784,3.13e-54,3;CL:0000990,6.24e-50,8;CL:0002009,5.67e-23,61;CL:0000557,6.61e-21,67;CL:0002194,8.68e-19,59;CL:0000576,8.68e-19,59;CL:0000040,8.68e-19,59;CL:0000559,8.68e-19,59;CL:0000839,8.75e-17,66;CL:0000766,2.27e-15,72;CL:0000738,2.78e-15,136;CL:0000763,7.62e-13,108;CL:0000049,7.62e-13,108;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0002031,1.64e-11,120;CL:0001014,2.49e-10,2;CL:0001016,2.49e-10,2;CL:0002087,1.71e-09,115;CL:0002032,1.97e-08,161;CL:0000837,1.97e-08,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.15e-23!112;UBERON:0002405!2.64e-22!115;UBERON:0002390!1.36e-20!102;UBERON:0003061!1.36e-20!102;UBERON:0002371!5.16e-20!80;UBERON:0001474!3.33e-18!86;UBERON:0004765!1.26e-14!101;UBERON:0001434!1.26e-14!101;UBERON:0002106!3.02e-11!3;UBERON:0004854!3.02e-11!3;UBERON:0009034!3.02e-11!3;UBERON:0002095!3.02e-11!3;UBERON:0004782!3.02e-11!3;UBERON:0003281!3.02e-11!3;UBERON:0009664!3.02e-11!3;UBERON:0002296!3.02e-11!3;UBERON:0005602!3.02e-11!3;UBERON:0001179!3.02e-11!3;UBERON:0006293!3.02e-11!3;UBERON:0004177!4.67e-08!7;UBERON:0002204!2.15e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.09e-18,76;UBERON:0001474,4.86e-17,82;UBERON:0004765,1.70e-15,90;UBERON:0002405,5.52e-15,93;UBERON:0002390,3.36e-14,98;UBERON:0003061,3.36e-14,98;UBERON:0001434,6.59e-14,100;UBERON:0002193,7.62e-13,108;UBERON:0002204,4.17e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0,0,0,0,0.290796477559129,0,0,0.697287110717054,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0.56738522469114,1.86846674698672,0,0,0,0,1.10483290796269,1.58231193720442,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,1.29818957461873,1.74129737299267,3.85578085504709,1.43094374583205,2.28797964312051,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0.246217006087397,0,1.63494278517601,0,0,0,0,0,0,0,0.176096868026452,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.322289439867886,0.299823467774787,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:50099795..50099808,- | |||
}} |
Latest revision as of 09:05, 24 July 2015
Short description: | p@chr12:50099795..50099808, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:50099795..50099808, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dendritic cell | 2.14e-79 | 10 |
immature conventional dendritic cell | 1.11e-74 | 5 |
common dendritic progenitor | 1.11e-74 | 5 |
plasmacytoid dendritic cell | 3.13e-54 | 3 |
conventional dendritic cell | 6.24e-50 | 8 |
macrophage dendritic cell progenitor | 5.67e-23 | 61 |
granulocyte monocyte progenitor cell | 6.61e-21 | 67 |
monopoietic cell | 8.68e-19 | 59 |
monocyte | 8.68e-19 | 59 |
monoblast | 8.68e-19 | 59 |
promonocyte | 8.68e-19 | 59 |
myeloid lineage restricted progenitor cell | 8.75e-17 | 66 |
myeloid leukocyte | 2.27e-15 | 72 |
leukocyte | 2.78e-15 | 136 |
myeloid cell | 7.62e-13 | 108 |
common myeloid progenitor | 7.62e-13 | 108 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 1.64e-11 | 120 |
CD1a-positive Langerhans cell | 2.49e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.49e-10 | 2 |
nongranular leukocyte | 1.71e-09 | 115 |
hematopoietic oligopotent progenitor cell | 1.97e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.97e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.09e-18 | 76 |
bone element | 4.86e-17 | 82 |
skeletal element | 1.70e-15 | 90 |
immune system | 5.52e-15 | 93 |
hematopoietic system | 3.36e-14 | 98 |
blood island | 3.36e-14 | 98 |
skeletal system | 6.59e-14 | 100 |
hemolymphoid system | 7.62e-13 | 108 |
musculoskeletal system | 4.17e-08 | 167 |