FFCP PHASE1:Hg19::chr12:49595765..49595807,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:49595765..49595807,- | |||
|coexpression_cluster_id=C104 | |||
|description=CAGE_peak_at_chr12:49595765..49595807,- | |description=CAGE_peak_at_chr12:49595765..49595807,- | ||
|id=chr12:49595765..49595807,- | |id=chr12:49595765..49595807,- | ||
|ontology_enrichment_celltype=CL:0002393!2.66e-13!9;CL:0002397!2.66e-13!9;CL:0000738!1.77e-12!140;CL:0000624!5.57e-10!6;CL:0002031!9.15e-10!124;CL:0000037!1.43e-09!172;CL:0000566!1.43e-09!172;CL:0002032!3.52e-09!165;CL:0000837!3.52e-09!165;CL:0002087!6.93e-09!119;CL:0000791!1.84e-08!18;CL:0000789!1.84e-08!18;CL:0002420!1.84e-08!18;CL:0002419!1.84e-08!18;CL:0000790!1.84e-08!18;CL:0000988!2.43e-08!182;CL:0000766!1.17e-07!76;CL:0000084!2.12e-07!25;CL:0000827!2.12e-07!25;CL:0002057!3.25e-07!42 | |ontology_enrichment_celltype=CL:0002393!2.66e-13!9;CL:0002397!2.66e-13!9;CL:0000738!1.77e-12!140;CL:0000624!5.57e-10!6;CL:0002031!9.15e-10!124;CL:0000037!1.43e-09!172;CL:0000566!1.43e-09!172;CL:0002032!3.52e-09!165;CL:0000837!3.52e-09!165;CL:0002087!6.93e-09!119;CL:0000791!1.84e-08!18;CL:0000789!1.84e-08!18;CL:0002420!1.84e-08!18;CL:0002419!1.84e-08!18;CL:0000790!1.84e-08!18;CL:0000988!2.43e-08!182;CL:0000766!1.17e-07!76;CL:0000084!2.12e-07!25;CL:0000827!2.12e-07!25;CL:0002057!3.25e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000767;1.51e-25;3!CL:0000094;8.11e-17;8!CL:0000097;2.42e-16;5!CL:0000624;6.77e-13;6!CL:0000081;2.72e-12;11!CL:0000037;6.04e-10;1!CL:0001024;6.04e-10;1!CL:0002553;6.04e-10;1!CL:0000895;1.48e-09;1!CL:0000163;2.62e-09;9!CL:0000791;1.71e-07;18!CL:0000789;1.71e-07;18!CL:0002419;1.71e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,3.09e-25,3;CL:0000094,1.02e-16,8;CL:0000097,2.42e-16,5;CL:0002028,2.42e-16,5;CL:0000624,5.75e-13,6;CL:0000081,3.20e-12,11;CL:0001024,5.31e-10,1;CL:0002553,6.31e-10,1;CL:0000810,1.76e-09,1;CL:0000895,1.76e-09,1;CL:0002436,1.76e-09,1;CL:0002427,1.76e-09,1;CL:0002428,1.76e-09,1;CL:0002429,1.76e-09,1;CL:0002433,1.76e-09,1;CL:0002431,1.76e-09,1;CL:0002432,1.76e-09,1;CL:0000163,2.62e-09,9;CL:0000738,5.54e-08,136;CL:0000766,6.13e-08,72;CL:0000791,1.54e-07,18;CL:0000789,1.54e-07,18;CL:0002420,1.54e-07,18;CL:0002419,1.54e-07,18;CL:0000790,1.54e-07,18;CL:0000037,3.44e-07,168;CL:0000134,7.81e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002427;1.48e-09;1!CL:0000790;1.71e-07;18 | |||
|ontology_enrichment_disease=DOID:2394!8.23e-08!14 | |ontology_enrichment_disease=DOID:2394!8.23e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:5662;1.48e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.36e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.15148819429164,1.08371286321253,0,0,0,0,0.142169232487422,2.64240395401362,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0.633765858935825,0.637812899895131,1.04829322754188,0.22465726229299,0.450530678524519,0.803627933485401,0.570025487482497,0.19891667719909,1.0959849225878,0,0,0,0.426730222566507,0,0,0,0,0,0,0.764546456250458,2.64342657158052,0.560508562981536,0.790152254325231,0.393419540227666,1.17903228824749,1.64481199199607,0,0.651844533267181,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0,0.390178042679635,0.164437904603676,0,0,0.593146252648242,0.802622484269139,0,0,1.14966148080576,0.68725489096526,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,1.20964045934839,0.267440195783507,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,3.7319060797339,11.9619561336078,4.67097003677606,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.630809660135739,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0.142283686696828,0.159426272728822,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.667396566847634,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0.236387681767936,1.37897349296586,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803765742325096,0.962776056180637,2.49264202817511,0,0,0,0,0,0,0,1.79287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,1.10961172300523,0,0,0,0,0,0.15543720058278,0.443565449968902,0.159296767163702,0,2.01841843939137,0,0.265841714557995,0.521745061811734,0.601030435988874,1.14241563650639,1.62748293281865,0.545545977607678,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.490696182767533,0,0.737318726261158,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0.495743057036009,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0.127762427639595,0,0,0,0,0.0887023701626388,0,1.20041606606193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.219881033490858,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.15148819429164,1.08371286321253,0,0,0,0,0.142169232487422,2.64240395401362,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0.633765858935825,0.637812899895131,1.04829322754188,0.22465726229299,0.450530678524519,0.803627933485401,0.570025487482497,0.19891667719909,1.0959849225878,0,0,0,0.426730222566507,0,0,0,0,0,0,0.764546456250458,2.64342657158052,0.560508562981536,0.790152254325231,0.393419540227666,1.17903228824749,1.64481199199607,0,0.651844533267181,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0,0.390178042679635,0.164437904603676,0,0,0.593146252648242,0.802622484269139,0,0,1.14966148080576,0.68725489096526,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,1.20964045934839,0.267440195783507,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,3.7319060797339,11.9619561336078,4.67097003677606,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.630809660135739,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0.142283686696828,0.159426272728822,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.667396566847634,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0.236387681767936,1.37897349296586,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803765742325096,0.962776056180637,2.49264202817511,0,0,0,0,0,0,0,1.79287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,1.10961172300523,0,0,0,0,0,0.15543720058278,0.443565449968902,0.159296767163702,0,2.01841843939137,0,0.265841714557995,0.521745061811734,0.601030435988874,1.14241563650639,1.62748293281865,0.545545977607678,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.490696182767533,0,0.737318726261158,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0.495743057036009,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0.127762427639595,0,0,0,0,0.0887023701626388,0,1.20041606606193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.219881033490858,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:49595765..49595807,- | |short_description=p@chr12:49595765..49595807,- | ||
}} | }} |
Latest revision as of 09:01, 24 July 2015
Short description: | p@chr12:49595765..49595807, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:49595765..49595807, - |
Coexpression cluster: | C104_Mast_Basophils_immature_CD14_CD34_eye_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 3.09e-25 | 3 |
granulocyte | 1.02e-16 | 8 |
mast cell | 2.42e-16 | 5 |
basophil mast progenitor cell | 2.42e-16 | 5 |
CD4-positive, alpha-beta T cell | 5.75e-13 | 6 |
blood cell | 3.20e-12 | 11 |
CD34-positive, CD38-negative hematopoietic stem cell | 5.31e-10 | 1 |
lung fibroblast | 6.31e-10 | 1 |
CD4-positive, alpha-beta thymocyte | 1.76e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.76e-09 | 1 |
mature CD4 single-positive thymocyte | 1.76e-09 | 1 |
resting double-positive thymocyte | 1.76e-09 | 1 |
double-positive blast | 1.76e-09 | 1 |
CD69-positive double-positive thymocyte | 1.76e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.76e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.76e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.76e-09 | 1 |
endocrine cell | 2.62e-09 | 9 |
leukocyte | 5.54e-08 | 136 |
myeloid leukocyte | 6.13e-08 | 72 |
mature alpha-beta T cell | 1.54e-07 | 18 |
alpha-beta T cell | 1.54e-07 | 18 |
immature T cell | 1.54e-07 | 18 |
mature T cell | 1.54e-07 | 18 |
immature alpha-beta T cell | 1.54e-07 | 18 |
hematopoietic stem cell | 3.44e-07 | 168 |
mesenchymal cell | 7.81e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.36e-09 | 1 |