FFCP PHASE1:Hg19::chr12:47462010..47462014,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:47462010..47462014,+ | |||
|description=CAGE_peak_at_chr12:47462010..47462014,+ | |||
|id=chr12:47462010..47462014,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.24e-08!25;CL:0000133!5.51e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.91e-23;5!CL:0002321;1.68e-08;15!CL:0000243;1.21e-07;15!CL:0000125;1.21e-07;15!CL:0000095;6.19e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,5.30e-11,41;CL:0000133,6.88e-08,59;CL:0000243,1.25e-07,15;CL:0000125,1.25e-07,15;CL:0000030,1.25e-07,15;CL:0000339,1.25e-07,15;CL:0000095,6.38e-07,17;CL:0000123,6.38e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.68e-11;10!CL:0000339;1.21e-07;15 | |||
|ontology_enrichment_disease=DOID:0050687!1.91e-12!143;DOID:162!2.54e-12!235;DOID:14566!7.11e-12!239;DOID:171!1.15e-08!10;DOID:3095!5.71e-07!22;DOID:2994!5.71e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3093;8.12e-22;11!DOID:169;9.95e-20;6!DOID:3193;2.55e-15;2!DOID:962;2.55e-15;2!DOID:171;2.90e-12;10!DOID:3095;3.20e-12;22!DOID:2994;3.20e-12;22!DOID:1192;1.14e-10;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,9.03e-22,11;DOID:169,9.49e-20,6;DOID:3193,2.74e-15,2;DOID:962,2.74e-15,2;DOID:171,2.81e-12,10;DOID:3095,3.08e-12,22;DOID:2994,3.08e-12,22;DOID:1192,1.20e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0000013!3.18e-07!5;UBERON:0002410!3.18e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.91e-23;5!UBERON:0002410;1.91e-23;5!UBERON:0003714;2.55e-15;2!UBERON:0000010;1.63e-13;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.81e-23,5;UBERON:0002410,1.81e-23,5;UBERON:0003714,2.74e-15,2;UBERON:0000010,1.58e-13,8 | |||
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| ||
|short_description=p@chr12:47462010..47462014,+ | |||
}} | }} |
Latest revision as of 08:44, 24 July 2015
Short description: | p@chr12:47462010..47462014, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:47462010..47462014, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 5.30e-11 | 41 |
neurectodermal cell | 6.88e-08 | 59 |
glial cell (sensu Vertebrata) | 1.25e-07 | 15 |
glial cell | 1.25e-07 | 15 |
glioblast | 1.25e-07 | 15 |
glioblast (sensu Vertebrata) | 1.25e-07 | 15 |
neuron associated cell | 6.38e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.38e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.81e-23 | 5 |
autonomic nervous system | 1.81e-23 | 5 |
neural tissue | 2.74e-15 | 2 |
peripheral nervous system | 1.58e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 9.03e-22 | 11 |
neuroendocrine tumor | 9.49e-20 | 6 |
peripheral nerve sheath neoplasm | 2.74e-15 | 2 |
neurofibroma | 2.74e-15 | 2 |
neuroectodermal tumor | 2.81e-12 | 10 |
germ cell and embryonal cancer | 3.08e-12 | 22 |
germ cell cancer | 3.08e-12 | 22 |
peripheral nervous system neoplasm | 1.20e-10 | 3 |