FFCP PHASE1:Hg19::chr12:4121031..4121079,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:4121031..4121079,+ | |||
|coexpression_cluster_id=C461 | |coexpression_cluster_id=C461 | ||
|description=CAGE_peak_at_chr12:4121031..4121079,+ | |description=CAGE_peak_at_chr12:4121031..4121079,+ | ||
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|ontology_enrichment_celltype=CL:0000313!1.46e-10!1;CL:0000223!1.61e-09!59;CL:0000181!6.95e-08!12;CL:0000417!6.95e-08!12;CL:0000668!6.95e-08!12;CL:0000414!6.95e-08!12;CL:0000412!6.95e-08!12;CL:0000182!6.95e-08!12 | |ontology_enrichment_celltype=CL:0000313!1.46e-10!1;CL:0000223!1.61e-09!59;CL:0000181!6.95e-08!12;CL:0000417!6.95e-08!12;CL:0000668!6.95e-08!12;CL:0000414!6.95e-08!12;CL:0000412!6.95e-08!12;CL:0000182!6.95e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000307;5.96e-34;3!CL:0002202;2.45e-12;9!CL:0002632;2.45e-12;9!CL:0002368;5.70e-09;13!CL:0002076;8.24e-08;42 | |ontology_enrichment_celltype_v019=CL:0000307;5.96e-34;3!CL:0002202;2.45e-12;9!CL:0002632;2.45e-12;9!CL:0002368;5.70e-09;13!CL:0002076;8.24e-08;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.96e-34,3;CL:0000069,5.96e-34,3;CL:0000307,5.96e-34,3;CL:0000377,5.96e-34,3;CL:0002202,2.45e-12,9;CL:0002632,2.45e-12,9;CL:0002076,1.07e-10,42;CL:0002368,5.70e-09,13;CL:0000223,4.33e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.74e-50;2!UBERON:0010056;2.74e-50;2!CL:0000377;5.96e-34;3 | |ontology_enrichment_development_v019=UBERON:0008814;2.74e-50;2!UBERON:0010056;2.74e-50;2!CL:0000377;5.96e-34;3 | ||
|ontology_enrichment_disease=DOID:2152!1.46e-10!1;DOID:120!1.76e-08!27;DOID:193!6.93e-08!29;DOID:305!1.67e-07!106 | |ontology_enrichment_disease=DOID:2152!1.46e-10!1;DOID:120!1.76e-08!27;DOID:193!6.93e-08!29;DOID:305!1.67e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.86e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;1.86e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004911!1.46e-10!1;UBERON:0001052!1.47e-10!4;UBERON:0004907!1.27e-08!5;UBERON:0002365!1.02e-07!31;UBERON:0002330!1.02e-07!31;UBERON:0008835!3.06e-07!22;UBERON:0003894!3.06e-07!22;UBERON:0009854!6.25e-07!23 | |ontology_enrichment_uberon=UBERON:0004911!1.46e-10!1;UBERON:0001052!1.47e-10!4;UBERON:0004907!1.27e-08!5;UBERON:0002365!1.02e-07!31;UBERON:0002330!1.02e-07!31;UBERON:0008835!3.06e-07!22;UBERON:0003894!3.06e-07!22;UBERON:0009854!6.25e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;4.27e-34;3!UBERON:0001033;4.27e-34;3!UBERON:0003343;5.56e-26;4!UBERON:0004785;5.56e-26;4!UBERON:0000974;7.67e-18;6!UBERON:0003126;1.91e-15;7!UBERON:0001005;1.91e-15;7!UBERON:0003729;5.28e-09;13!UBERON:0007196;5.93e-08;15!UBERON:0001558;5.93e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0001723;4.27e-34;3!UBERON:0001033;4.27e-34;3!UBERON:0003343;5.56e-26;4!UBERON:0004785;5.56e-26;4!UBERON:0000974;7.67e-18;6!UBERON:0003126;1.91e-15;7!UBERON:0001005;1.91e-15;7!UBERON:0003729;5.28e-09;13!UBERON:0007196;5.93e-08;15!UBERON:0001558;5.93e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.27e-34,3;UBERON:0001033,4.27e-34,3;UBERON:0010056,4.27e-34,3;UBERON:0003343,5.56e-26,4;UBERON:0004785,5.56e-26,4;UBERON:0003126,1.91e-15,7;UBERON:0001005,1.91e-15,7;UBERON:0000974,2.73e-11,10;UBERON:0001042,2.73e-11,10;UBERON:0009145,2.73e-11,10;UBERON:0006562,2.16e-10,11;UBERON:0000072,1.08e-09,47;UBERON:0003729,5.28e-09,13;UBERON:0000065,1.34e-08,54;UBERON:0007196,5.93e-08,15;UBERON:0001558,5.93e-08,15;UBERON:0003103,4.47e-07,68;UBERON:0008814,7.18e-07,18 | |||
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|short_description=p@chr12:4121031..4121079,+ | |short_description=p@chr12:4121031..4121079,+ | ||
}} | }} |
Latest revision as of 08:24, 24 July 2015
Short description: | p@chr12:4121031..4121079, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:4121031..4121079, + |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 5.96e-34 | 3 |
branched duct epithelial cell | 5.96e-34 | 3 |
tracheal epithelial cell | 5.96e-34 | 3 |
tracheoblast | 5.96e-34 | 3 |
epithelial cell of tracheobronchial tree | 2.45e-12 | 9 |
epithelial cell of lower respiratory tract | 2.45e-12 | 9 |
endo-epithelial cell | 1.07e-10 | 42 |
respiratory epithelial cell | 5.70e-09 | 13 |
endodermal cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
tongue | 4.27e-34 | 3 |
gustatory system | 4.27e-34 | 3 |
future tongue | 4.27e-34 | 3 |
mucosa of oral region | 5.56e-26 | 4 |
respiratory system mucosa | 5.56e-26 | 4 |
trachea | 1.91e-15 | 7 |
respiratory airway | 1.91e-15 | 7 |
neck | 2.73e-11 | 10 |
chordate pharynx | 2.73e-11 | 10 |
pharyngeal region of foregut | 2.73e-11 | 10 |
pharynx | 2.16e-10 | 11 |
segment of respiratory tract | 1.08e-09 | 47 |
mouth mucosa | 5.28e-09 | 13 |
respiratory tract | 1.34e-08 | 54 |
tracheobronchial tree | 5.93e-08 | 15 |
lower respiratory tract | 5.93e-08 | 15 |
compound organ | 4.47e-07 | 68 |
pharyngeal arch system | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.86e-08 | 14 |