FFCP PHASE1:Hg19::chr12:40618649..40618678,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:40618649..40618678,- | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_at_chr12:40618649..40618678,- | |description=CAGE_peak_at_chr12:40618649..40618678,- | ||
|id=chr12:40618649..40618678,- | |id=chr12:40618649..40618678,- | ||
|ontology_enrichment_celltype=CL:0002057!3.44e-38!42;CL:0000766!3.33e-37!76;CL:0000738!2.78e-35!140;CL:0000860!2.14e-34!45;CL:0002194!2.48e-33!63;CL:0000576!2.48e-33!63;CL:0000040!2.48e-33!63;CL:0000559!2.48e-33!63;CL:0002009!3.28e-33!65;CL:0002087!1.11e-31!119;CL:0000557!1.26e-30!71;CL:0000839!6.43e-30!70;CL:0002031!2.26e-27!124;CL:0000037!1.96e-26!172;CL:0000566!1.96e-26!172;CL:0002032!3.20e-25!165;CL:0000837!3.20e-25!165;CL:0000763!1.27e-23!112;CL:0000049!1.27e-23!112;CL:0000988!3.43e-23!182;CL:0002393!1.67e-09!9;CL:0002397!1.67e-09!9;CL:0000945!1.00e-08!24;CL:0000826!1.00e-08!24;CL:0000236!3.16e-08!14;CL:0000094!4.25e-07!8 | |ontology_enrichment_celltype=CL:0002057!3.44e-38!42;CL:0000766!3.33e-37!76;CL:0000738!2.78e-35!140;CL:0000860!2.14e-34!45;CL:0002194!2.48e-33!63;CL:0000576!2.48e-33!63;CL:0000040!2.48e-33!63;CL:0000559!2.48e-33!63;CL:0002009!3.28e-33!65;CL:0002087!1.11e-31!119;CL:0000557!1.26e-30!71;CL:0000839!6.43e-30!70;CL:0002031!2.26e-27!124;CL:0000037!1.96e-26!172;CL:0000566!1.96e-26!172;CL:0002032!3.20e-25!165;CL:0000837!3.20e-25!165;CL:0000763!1.27e-23!112;CL:0000049!1.27e-23!112;CL:0000988!3.43e-23!182;CL:0002393!1.67e-09!9;CL:0002397!1.67e-09!9;CL:0000945!1.00e-08!24;CL:0000826!1.00e-08!24;CL:0000236!3.16e-08!14;CL:0000094!4.25e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.38e-65;33!CL:0002057;5.38e-65;33!CL:0000576;1.43e-52;48!CL:0000473;5.50e-50;39!CL:0000234;5.50e-50;39!CL:0000766;3.74e-36;69!CL:0000236;3.37e-21;13!CL:0002087;6.86e-20;104!CL:0000738;1.58e-16;136!CL:0000763;3.30e-16;100!CL:0000094;6.99e-16;8!CL:0000945;2.03e-14;24!CL:0002393;7.20e-14;6!CL:0002397;7.20e-14;6!CL:0000081;3.24e-11;11!CL:0000988;4.53e-10;177!CL:0000775;1.62e-09;3!CL:0000875;1.46e-08;3!CL:0002396;1.46e-08;3!CL:0000219;1.36e-07;193!CL:0000771;9.20e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.18e-92,42;CL:0002057,5.18e-92,42;CL:0000473,4.26e-87,48;CL:0000234,4.26e-87,48;CL:0000766,1.76e-78,72;CL:0002194,2.08e-70,59;CL:0000576,2.08e-70,59;CL:0000040,2.08e-70,59;CL:0000559,2.08e-70,59;CL:0002009,9.90e-68,61;CL:0000738,1.32e-65,136;CL:0000839,9.69e-62,66;CL:0002087,2.86e-61,115;CL:0000557,1.20e-60,67;CL:0002031,9.42e-54,120;CL:0000037,4.45e-50,168;CL:0002032,2.92e-49,161;CL:0000837,2.92e-49,161;CL:0000763,6.33e-48,108;CL:0000049,6.33e-48,108;CL:0000988,1.02e-46,177;CL:0002393,7.82e-21,9;CL:0002397,7.82e-21,9;CL:0000236,1.02e-19,14;CL:0000094,8.68e-16,8;CL:0000134,2.39e-15,354;CL:0002320,9.61e-15,361;CL:0000945,1.49e-14,24;CL:0000826,1.49e-14,24;CL:0000219,1.27e-12,386;CL:0000081,3.77e-11,11;CL:0000048,1.18e-10,427;CL:0000723,2.73e-10,433;CL:0000034,8.05e-10,441;CL:0000775,1.61e-09,3;CL:0000875,1.41e-08,3;CL:0002396,1.41e-08,3;CL:0000771,9.22e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;7.34e-65;42!CL:0000049;5.16e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.40e-35!102;UBERON:0003061!4.40e-35!102;UBERON:0002193!9.83e-32!112;UBERON:0002371!8.73e-27!80;UBERON:0001474!3.23e-24!86;UBERON:0004765!3.85e-20!101;UBERON:0001434!3.85e-20!101;UBERON:0007023!5.32e-20!115;UBERON:0002405!1.87e-17!115;UBERON:0003081!3.27e-11!216;UBERON:0002204!4.90e-11!167;UBERON:0000178!2.07e-09!15;UBERON:0000179!2.07e-09!15;UBERON:0000463!2.07e-09!15;UBERON:0000479!2.68e-08!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.19e-19;15!UBERON:0000179;2.19e-19;15!UBERON:0000463;2.19e-19;15!UBERON:0002390;1.34e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.55e-67,98;UBERON:0003061,2.55e-67,98;UBERON:0002193,9.05e-60,108;UBERON:0002371,4.24e-52,76;UBERON:0001474,1.96e-47,82;UBERON:0002405,1.86e-42,93;UBERON:0004765,3.55e-42,90;UBERON:0001434,8.77e-37,100;UBERON:0003081,4.57e-25,203;UBERON:0000178,2.12e-19,15;UBERON:0000179,2.12e-19,15;UBERON:0000463,2.12e-19,15;UBERON:0002204,2.24e-17,167;UBERON:0002384,6.38e-14,371;UBERON:0000926,3.28e-11,315;UBERON:0004120,3.28e-11,315;UBERON:0006603,3.28e-11,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,1.14620108621927,1.31360943119913,0.865818594450472,0,1.15148819429164,1.08371286321253,0,0,0.369754010166788,0,0,0.293600439334847,1.10799081706375,1.80490002723128,1.30206522429511,0.671746422719773,0.647787332037959,1.03030227053675,3.78035420826868,4.1566353805769,5.82201746850759,3.48643555358527,1.23350366406548,3.09706370895104,40.8523197097454,20.2366958157989,36.6547456327307,1.37898272294647,0,1.35426486594342,3.20011977222428,1.63743690034707,4.71919317334678,2.44867113896722,1.60464513538047,3.83602275479425,11.2149442063483,14.5608470063791,12.3605177654481,2.32167390902867,1.13477044938228,3.11411124497787,22.1098825425934,11.9941071236646,23.8907729175628,1.81619850790011,1.47311054395026,6.96217252369946,2.5350634357433,2.76385589954557,4.40283155567589,2.2465726229299,3.60424542819615,2.25015821375912,3.70516566863623,5.76858363877361,4.20127553658658,5.27988733383968,3.27683166757279,2.66852776159066,1.70692089026603,4.80475184443215,3.4485146397269,4.62731410949403,4.77026877267682,3.41527781465669,2.93618594685469,1.91136614062614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0.370784442784429,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,34.9002237733493,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0.408308342509787,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0,0,0.504867548488229,0.0920498986422993,0.646584227275248,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.468008530278475,0.743155811443641,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,1.30139853857622,0,0,0,20.9721966705211,38.8909896965232,33.9820721017549,0.12269149171914,0,0.271265023699736,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0.82707210449155,1.94142780736755,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0.308097234229289,0,0,0.322260734604821,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,7.10426652925037,8.41100927856613,11.3929437434833,10.4821981201427,10.6954191002411,7.78167973431261,5.40031437238115,5.55187623405989,0,0,0,0.929015875628594,0,0,0,0,0.191505370132367,0,0,0,0.456469358066384,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0,0,0.552567831062295,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,7.18449277040819,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.846452843541768,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0.0882561266915003,0.225980740780532,0,0,0.443175571691151,0,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0,0,0,0.525774708558629,0.279282401272254,0.458320848023367,0.717873024576814,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0.77380195455795,0.242998226632099,0,1.02447419488958,0.944182586429966,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,2.45611048905698,1.10043013569766,5.79934677486074,0.992332043623902,0,0.852548188666271,0,0,0,0.306345576763462,0,0.157054096250234,0.886068179966986,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0.490696182767533,0,0,0,0,0.106691729694141,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.385375350578757,0,0.319267718114302,0.615349092722265,0.252071696221718,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.19024743058172,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0.682986574053893,0.177404740325278,0,0,0.339848664884159,0.394636641377094,0,0,0.39246546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| ||
|short_description=p@chr12:40618649..40618678,- | |short_description=p@chr12:40618649..40618678,- | ||
}} | }} |
Latest revision as of 08:22, 24 July 2015
Short description: | p@chr12:40618649..40618678, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:40618649..40618678, - |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.55e-67 | 98 |
blood island | 2.55e-67 | 98 |
hemolymphoid system | 9.05e-60 | 108 |
bone marrow | 4.24e-52 | 76 |
bone element | 1.96e-47 | 82 |
immune system | 1.86e-42 | 93 |
skeletal element | 3.55e-42 | 90 |
skeletal system | 8.77e-37 | 100 |
lateral plate mesoderm | 4.57e-25 | 203 |
blood | 2.12e-19 | 15 |
haemolymphatic fluid | 2.12e-19 | 15 |
organism substance | 2.12e-19 | 15 |
musculoskeletal system | 2.24e-17 | 167 |
connective tissue | 6.38e-14 | 371 |
mesoderm | 3.28e-11 | 315 |
mesoderm-derived structure | 3.28e-11 | 315 |
presumptive mesoderm | 3.28e-11 | 315 |