FFCP PHASE1:Hg19::chr12:39104065..39104071,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:39104065..39104071,- | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_at_chr12:39104065..39104071,- | |description=CAGE_peak_at_chr12:39104065..39104071,- | ||
|id=chr12:39104065..39104071,- | |id=chr12:39104065..39104071,- | ||
|ontology_enrichment_celltype=CL:0000557!1.46e-09!71;CL:0000860!1.60e-09!45;CL:0002009!1.72e-09!65;CL:0002194!2.28e-09!63;CL:0000576!2.28e-09!63;CL:0000040!2.28e-09!63;CL:0000559!2.28e-09!63;CL:0000839!4.19e-09!70;CL:0002057!2.21e-08!42;CL:0002087!5.13e-08!119;CL:0002031!2.19e-07!124;CL:0000766!2.38e-07!76;CL:0000738!8.50e-07!140 | |ontology_enrichment_celltype=CL:0000557!1.46e-09!71;CL:0000860!1.60e-09!45;CL:0002009!1.72e-09!65;CL:0002194!2.28e-09!63;CL:0000576!2.28e-09!63;CL:0000040!2.28e-09!63;CL:0000559!2.28e-09!63;CL:0000839!4.19e-09!70;CL:0002057!2.21e-08!42;CL:0002087!5.13e-08!119;CL:0002031!2.19e-07!124;CL:0000766!2.38e-07!76;CL:0000738!8.50e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000576;7.95e-10;48!CL:0002393;3.80e-09;6!CL:0002397;3.80e-09;6!CL:0000226;2.15e-08;3!CL:0000842;2.15e-08;3!CL:0000313;2.08e-07;1!CL:0000766;2.59e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.39e-12,48;CL:0000234,2.39e-12,48;CL:0000860,8.46e-12,42;CL:0002057,8.46e-12,42;CL:0002194,2.39e-11,59;CL:0000576,2.39e-11,59;CL:0000040,2.39e-11,59;CL:0000559,2.39e-11,59;CL:0002009,6.62e-11,61;CL:0002087,1.95e-10,115;CL:0000839,6.46e-10,66;CL:0000557,9.78e-10,67;CL:0000766,6.56e-09,72;CL:0000226,1.18e-08,3;CL:0000842,1.18e-08,3;CL:0000738,2.70e-08,136;CL:0000313,2.09e-07,1;CL:0000988,2.13e-07,177;CL:0002031,2.30e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.83e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;2.08e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-12!115;UBERON:0002193!4.41e-10!112;UBERON:0002390!1.05e-08!102;UBERON:0003061!1.05e-08!102;UBERON:0002405!5.21e-08!115;UBERON:0002371!5.90e-08!80;UBERON:0001474!1.39e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.08e-07;1!UBERON:0002135;6.53e-07;1!UBERON:0002171;6.53e-07;1!UBERON:0006518;6.53e-07;1!UBERON:0008949;6.53e-07;1!UBERON:0000101;6.53e-07;1!UBERON:0002167;6.53e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.40e-11,98;UBERON:0003061,2.40e-11,98;UBERON:0002193,5.37e-10,108;UBERON:0002371,2.51e-08,76;UBERON:0001474,1.47e-07,82;UBERON:0004911,2.09e-07,1;UBERON:0002171,3.17e-07,1;UBERON:0006518,3.17e-07,1;UBERON:0008949,3.17e-07,1;UBERON:0000101,3.17e-07,1;UBERON:0002167,3.17e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,2.17010870715852,1.34349284543955,0,0.515151135268373,0.290796477559129,0.377875943688809,0,0.232429036905685,0.822335776043652,0.309706370895104,0.28769239232215,1.5369642391746,0.236482229888585,0.344745680736619,0,1.35426486594342,0,0.545812300115692,0,0,0,0,0,1.79517291859469,0.426224750532694,0.290209238628584,0,0,1.50749199154046,1.5644487552606,0.65156653411535,0,0.368277635987565,1.26584954976354,0,1.4882300997553,1.04829322754188,0.561643155732475,1.35159203557356,0,0.285012743741249,0.59675003159727,0.547992461293902,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,1.12101712596307,0,1.180258620683,0,0.205601498999509,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.493313713811028,0,0,0.296573126324121,0.267540828089713,0,0,0,0.68725489096526,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0,0,0,0.567208902984407,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.404132016209064,0,0,0,0,0,0.570471821544449,0,0,0,0,0.408308342509787,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0.570762456703795,0,0,0.984868024349589,0,0.297262324577456,0,0,0,0.179117045405697,0.290633938513962,0,0,0.088048434013226,0,0.864719720501769,0.88369703398466,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,1.02674429023799,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,1.44737618286021,1.50999940573032,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0.0852266274161009,0,0,0,0.893288987462089,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.192444225451024,0,0,0.659006605437454,0,0,0.443430153536676,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0.338583555603207,0.1605880751037,0.201799707191048,0.425846237690326,0,0.307240764308458,0.223676107892416,0.500547425135725,0.976940477010201,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0.307160702099232,0,0.422008249231538,0,0.16480387422676,0,0.398495976502139,0,0,0,1.23084805461069,0,0.179736702294654,0.537063524026827,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0,0.724999575434793,1.137934482855,0.254253650292766,0,0,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0.653630781113941,0,0.615602068030377,0,0.23056390438806,0.179515288819544,0,0,0,0.533034776018635,0,0,0,0,0,0,0.189753732724185,0.317873157960757,0,1.30586246527318,0.141353071433941,0,1.99052386215701,0.0884575645033392,1.22206028986725,2.6686901581256,0.741383633679017,1.14864144456001,0,0,0.468528891450678,0,0.19566461893209,0.242780379534093,0,0,0,0.758238955541855,0,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0,0.698906672968121,0.687944129886466,0.483781656445426,0.365446585430928,0.246346371159628,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.443175571691151,0,0.160317640503067,0.213452994739353,0,0,0.229073192331831,0.171594997861965,0.14405479798815,0.124252535565433,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0.859530882839914,0,1.11712960508902,0.458320848023367,0.717873024576814,0.199679000498991,0.858452096273142,0.223171457441873,0.335917362433631,0,0,0,0.0824158583811665,0.202210631562555,0.196854963029498,0,0,0.272406812223151,0,0,0,0.674921674654501,0,0.121499113316049,0,0.315222829196793,0.0524545881349981,0.316801009558219,0,0.383830394638891,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0.213574825135389,0.157204305099666,1.65695622138878,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.250381861413,0.573409195690071,0.554645257684261,0.18628920882415,0,0.124980407962107,0.1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|short_description=p@chr12:39104065..39104071,- | |short_description=p@chr12:39104065..39104071,- | ||
}} | }} |
Latest revision as of 08:18, 24 July 2015
Short description: | p@chr12:39104065..39104071, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:39104065..39104071, - |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.39e-12 | 48 |
phagocyte | 2.39e-12 | 48 |
classical monocyte | 8.46e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.46e-12 | 42 |
monopoietic cell | 2.39e-11 | 59 |
monocyte | 2.39e-11 | 59 |
monoblast | 2.39e-11 | 59 |
promonocyte | 2.39e-11 | 59 |
macrophage dendritic cell progenitor | 6.62e-11 | 61 |
nongranular leukocyte | 1.95e-10 | 115 |
myeloid lineage restricted progenitor cell | 6.46e-10 | 66 |
granulocyte monocyte progenitor cell | 9.78e-10 | 67 |
myeloid leukocyte | 6.56e-09 | 72 |
single nucleate cell | 1.18e-08 | 3 |
mononuclear cell | 1.18e-08 | 3 |
leukocyte | 2.70e-08 | 136 |
serous secreting cell | 2.09e-07 | 1 |
hematopoietic cell | 2.13e-07 | 177 |
hematopoietic lineage restricted progenitor cell | 2.30e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.40e-11 | 98 |
blood island | 2.40e-11 | 98 |
hemolymphoid system | 5.37e-10 | 108 |
bone marrow | 2.51e-08 | 76 |
bone element | 1.47e-07 | 82 |
epithelium of female gonad | 2.09e-07 | 1 |
lower lobe of right lung | 3.17e-07 | 1 |
right lung lobe | 3.17e-07 | 1 |
lower lobe of lung | 3.17e-07 | 1 |
lobe of lung | 3.17e-07 | 1 |
right lung | 3.17e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.09e-07 | 1 |