FFCP PHASE1:Hg19::chr12:39090170..39090175,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:39090170..39090175,- | |||
|description=CAGE_peak_at_chr12:39090170..39090175,- | |description=CAGE_peak_at_chr12:39090170..39090175,- | ||
|id=chr12:39090170..39090175,- | |id=chr12:39090170..39090175,- | ||
|ontology_enrichment_celltype=CL:0000839!3.67e-14!70;CL:0002194!8.68e-14!63;CL:0000576!8.68e-14!63;CL:0000040!8.68e-14!63;CL:0000559!8.68e-14!63;CL:0002087!1.81e-13!119;CL:0000557!6.07e-13!71;CL:0002009!6.54e-13!65;CL:0002031!1.56e-12!124;CL:0000860!2.52e-12!45;CL:0000037!4.44e-12!172;CL:0000566!4.44e-12!172;CL:0000766!6.30e-12!76;CL:0000988!6.36e-12!182;CL:0002032!7.56e-12!165;CL:0000837!7.56e-12!165;CL:0000763!1.58e-11!112;CL:0000049!1.58e-11!112;CL:0000738!4.54e-11!140;CL:0002057!6.04e-11!42 | |ontology_enrichment_celltype=CL:0000839!3.67e-14!70;CL:0002194!8.68e-14!63;CL:0000576!8.68e-14!63;CL:0000040!8.68e-14!63;CL:0000559!8.68e-14!63;CL:0002087!1.81e-13!119;CL:0000557!6.07e-13!71;CL:0002009!6.54e-13!65;CL:0002031!1.56e-12!124;CL:0000860!2.52e-12!45;CL:0000037!4.44e-12!172;CL:0000566!4.44e-12!172;CL:0000766!6.30e-12!76;CL:0000988!6.36e-12!182;CL:0002032!7.56e-12!165;CL:0000837!7.56e-12!165;CL:0000763!1.58e-11!112;CL:0000049!1.58e-11!112;CL:0000738!4.54e-11!140;CL:0002057!6.04e-11!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.49e-11;33!CL:0002057;4.49e-11;33!CL:0000313;1.89e-10;1!CL:0000473;1.19e-07;39!CL:0000234;1.19e-07;39!CL:0000576;2.99e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.71e-12,42;CL:0002057,3.71e-12,42;CL:0000473,1.64e-10,48;CL:0000234,1.64e-10,48;CL:0000313,1.80e-10,1;CL:0000763,1.76e-09,108;CL:0000049,1.76e-09,108;CL:0002194,3.32e-08,59;CL:0000576,3.32e-08,59;CL:0000040,3.32e-08,59;CL:0000559,3.32e-08,59;CL:0002009,6.59e-08,61;CL:0000839,3.06e-07,66;CL:0000988,3.76e-07,177;CL:0000557,4.05e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;3.62e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;1.89e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.80e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.44e-12!102;UBERON:0003061!1.44e-12!102;UBERON:0002371!5.35e-12!80;UBERON:0001474!2.64e-11!86;UBERON:0002193!2.28e-10!112;UBERON:0002405!1.67e-08!115;UBERON:0004765!2.76e-08!101;UBERON:0001434!2.76e-08!101 | |ontology_enrichment_uberon=UBERON:0002390!1.44e-12!102;UBERON:0003061!1.44e-12!102;UBERON:0002371!5.35e-12!80;UBERON:0001474!2.64e-11!86;UBERON:0002193!2.28e-10!112;UBERON:0002405!1.67e-08!115;UBERON:0004765!2.76e-08!101;UBERON:0001434!2.76e-08!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.89e-10;1!UBERON:0002134;2.59e-10;1!UBERON:0005208;2.59e-10;1!UBERON:0004145;2.59e-10;1!UBERON:0005946;2.59e-10;1!UBERON:0005965;2.59e-10;1!UBERON:0002078;2.59e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.80e-10,1;UBERON:0002134,2.59e-10,1;UBERON:0005208,2.59e-10,1;UBERON:0005946,2.59e-10,1;UBERON:0005965,2.59e-10,1;UBERON:0002078,2.59e-10,1;UBERON:0002390,8.65e-09,98;UBERON:0003061,8.65e-09,98;UBERON:0002193,8.03e-08,108 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.764134057479513,0.246301768349837,0.157421562627358,0,0.383829398097213,0,0,0,0,0,0,0,0,1.20326668482085,0.651032612147555,0.447830948479849,0,0.515151135268373,0.145398238779565,0.377875943688809,0,1.16214518452842,0,0.309706370895104,2.01384674625505,0.768482119587302,0.47296445977717,0,0.645484683583826,0,1.12945403725563,0,0.449446968890169,0,0.320929027076094,0,0.659702600373432,2.79249120670285,0.852449501065388,0.580418477257168,0,0.622822248995575,1.50749199154046,2.08593167368081,0.65156653411535,1.21079900526674,0,0,0,0.212604299965044,0.628975936525128,0.336985893439485,0.300353785683013,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0.526768169550154,0,0,0.822405995998037,0,0,0,0,0,0,0,0,0.128091319725675,0,0.328875809207352,0.552700035571697,0,0,0,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,2.94848165003288,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0,0,0,1.24060815673732,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,1.58625035258854,0,0,0,0,0,0,0,0,0,0.423347165447766,0,1.68478306868075,3.65175486453108,0,5.01268954180134,0.338583555603207,0.321176150207399,1.00899853595524,0.851692475380653,0,0.921722292925374,0.447352215784832,0,0.586164286206121,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.222886768554957,0,0.23874448473769,0,0.307160702099232,0,0,0.111308705022906,0.16480387422676,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0.10893846351899,0,0.230850775511391,0,0.46112780877612,0.0897576444097721,0.108647371922008,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0.189753732724185,0.317873157960757,0,1.79556088975062,0.141353071433941,0,0,0.0884575645033392,0,1.48260564340311,0.494255755786011,0.730953646538188,0,0,0.234264445725339,0,0,0.242780379534093,0,1.20990716048664,0,0.189559738885464,0,0.103688191397247,0,0.661983911750998,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0.343972064943233,0.580537987734511,0.219267951258557,0.164230914106418,0,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0.160317640503067,0,0,0,0.114536596165916,0,0,0.248505071130865,0,0,0,0.101998217636322,0,0,0.410716136675979,0,0,0,0.279282401272254,0.229160424011684,2.15361907373044,0,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0,0,0.0674035438541849,0.0984274815147488,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0,0,0.124980407962107,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0,0.477890301491107,0,0.465788870628778,0,0.265841714557995,0.521745061811734,0.300515217994437,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0.244736704506468,0.358177682162975,0,0.219284049578707,0.353378291891762,0,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0,0,0.163565394255844,0.327609848846413,0,0,0.7999495834197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| ||
|short_description=p@chr12:39090170..39090175,- | |short_description=p@chr12:39090170..39090175,- | ||
}} | }} |
Latest revision as of 08:18, 24 July 2015
Short description: | p@chr12:39090170..39090175, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:39090170..39090175, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.71e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.71e-12 | 42 |
defensive cell | 1.64e-10 | 48 |
phagocyte | 1.64e-10 | 48 |
serous secreting cell | 1.80e-10 | 1 |
myeloid cell | 1.76e-09 | 108 |
common myeloid progenitor | 1.76e-09 | 108 |
monopoietic cell | 3.32e-08 | 59 |
monocyte | 3.32e-08 | 59 |
monoblast | 3.32e-08 | 59 |
promonocyte | 3.32e-08 | 59 |
macrophage dendritic cell progenitor | 6.59e-08 | 61 |
myeloid lineage restricted progenitor cell | 3.06e-07 | 66 |
hematopoietic cell | 3.76e-07 | 177 |
granulocyte monocyte progenitor cell | 4.05e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.80e-10 | 1 |
tricuspid valve | 2.59e-10 | 1 |
right atrium valve | 2.59e-10 | 1 |
outflow tract of atrium | 2.59e-10 | 1 |
outflow part of right atrium | 2.59e-10 | 1 |
right cardiac atrium | 2.59e-10 | 1 |
hematopoietic system | 8.65e-09 | 98 |
blood island | 8.65e-09 | 98 |
hemolymphoid system | 8.03e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.80e-10 | 1 |