FFCP PHASE1:Hg19::chr12:27613644..27613652,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:27613644..27613652,- | |||
|coexpression_cluster_id=C3274 | |coexpression_cluster_id=C3274 | ||
|description=CAGE_peak_at_chr12:27613644..27613652,- | |description=CAGE_peak_at_chr12:27613644..27613652,- | ||
|id=chr12:27613644..27613652,- | |id=chr12:27613644..27613652,- | ||
|ontology_enrichment_celltype=CL:0002618!2.10e-16!3;CL:0002139!4.68e-13!24;CL:0005020!1.31e-08!6;CL:0002138!1.31e-08!6;CL:0005022!1.31e-08!6;CL:0000115!1.39e-08!35;CL:0002543!1.85e-08!6;CL:0001024!3.13e-07!1;CL:0000071!3.19e-07!18;CL:0002546!3.19e-07!18;CL:0002591!5.26e-07!1;CL:0000763!8.43e-07!112;CL:0000049!8.43e-07!112 | |ontology_enrichment_celltype=CL:0002618!2.10e-16!3;CL:0002139!4.68e-13!24;CL:0005020!1.31e-08!6;CL:0002138!1.31e-08!6;CL:0005022!1.31e-08!6;CL:0000115!1.39e-08!35;CL:0002543!1.85e-08!6;CL:0001024!3.13e-07!1;CL:0000071!3.19e-07!18;CL:0002546!3.19e-07!18;CL:0002591!5.26e-07!1;CL:0000763!8.43e-07!112;CL:0000049!8.43e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000037;3.44e-18;1!CL:0001024;3.44e-18;1!CL:0002591;1.03e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,3.16e-18,1;CL:0002591,1.44e-17,1;CL:0000763,4.69e-07,108;CL:0000049,4.69e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!8.46e-24!31;DOID:1240!2.06e-18!39;DOID:2531!7.00e-16!51;DOID:0060083!7.00e-16!51;DOID:9119!2.95e-07!1;DOID:1036!5.18e-07!8 | |ontology_enrichment_disease=DOID:8692!8.46e-24!31;DOID:1240!2.06e-18!39;DOID:2531!7.00e-16!51;DOID:0060083!7.00e-16!51;DOID:9119!2.95e-07!1;DOID:1036!5.18e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.55e-24;31!DOID:1036;3.19e-19;8!DOID:9119;2.66e-18;1!DOID:1240;7.28e-17;39!DOID:2531;2.17e-11;51!DOID:0060083;2.17e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.56e-26,31;DOID:1240,1.89e-20,39;DOID:1036,3.09e-19,8;DOID:9119,2.66e-18,1;DOID:2531,1.45e-15,51;DOID:0060083,1.45e-15,51 | |||
|ontology_enrichment_uberon=UBERON:0002066!4.68e-10!5;UBERON:0001986!3.19e-07!18;UBERON:0004638!3.19e-07!18;UBERON:0004852!3.19e-07!18 | |ontology_enrichment_uberon=UBERON:0002066!4.68e-10!5;UBERON:0001986!3.19e-07!18;UBERON:0004638!3.19e-07!18;UBERON:0004852!3.19e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.57e-09;2!UBERON:0002012;1.57e-09;2!UBERON:0008886;1.57e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,1.86e-09,2;UBERON:0007497,1.86e-09,2;UBERON:0003643,1.86e-09,2;UBERON:0003504,1.86e-09,2;UBERON:0003469,1.86e-09,2;UBERON:0003496,1.86e-09,2;UBERON:0002012,1.86e-09,2;UBERON:0008886,1.86e-09,2;UBERON:0007303,1.86e-09,2;UBERON:0002061,1.86e-09,2;UBERON:0005432,1.86e-09,2;UBERON:0004363,1.86e-09,2 | |||
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|short_description=p@chr12:27613644..27613652,- | |short_description=p@chr12:27613644..27613652,- | ||
}} | }} |
Latest revision as of 07:53, 24 July 2015
Short description: | p@chr12:27613644..27613652, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:27613644..27613652, - |
Coexpression cluster: | C3274_acute_chronic_CD133_CD34_leukemia_Reticulocytes_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 3.16e-18 | 1 |
smooth muscle cell of the pulmonary artery | 1.44e-17 | 1 |
myeloid cell | 4.69e-07 | 108 |
common myeloid progenitor | 4.69e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 1.86e-09 | 2 |
developing epithelial placode | 1.86e-09 | 2 |
respiratory system arterial blood vessel | 1.86e-09 | 2 |
respiratory system blood vessel | 1.86e-09 | 2 |
respiratory system artery | 1.86e-09 | 2 |
head blood vessel | 1.86e-09 | 2 |
pulmonary artery | 1.86e-09 | 2 |
pulmonary vascular system | 1.86e-09 | 2 |
pharyngeal vasculature | 1.86e-09 | 2 |
truncus arteriosus | 1.86e-09 | 2 |
aortic sac | 1.86e-09 | 2 |
pharyngeal arch artery | 1.86e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.56e-26 | 31 |
leukemia | 1.89e-20 | 39 |
chronic leukemia | 3.09e-19 | 8 |
acute myeloid leukemia | 2.66e-18 | 1 |
hematologic cancer | 1.45e-15 | 51 |
immune system cancer | 1.45e-15 | 51 |