FFCP PHASE1:Hg19::chr12:2468720..2468724,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:2468720..2468724,+ | |||
|coexpression_cluster_id=C366 | |||
|description=CAGE_peak_at_chr12:2468720..2468724,+ | |||
|id=chr12:2468720..2468724,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.24e-11;1!UBERON:0005425;3.11e-11;1!UBERON:0004874;3.11e-11;1!UBERON:0005062;4.12e-11;4!UBERON:0007284;4.12e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.53e-26!115;UBERON:0001049!1.15e-19!57;UBERON:0005068!1.15e-19!57;UBERON:0006241!1.15e-19!57;UBERON:0007135!1.15e-19!57;UBERON:0002020!1.11e-17!34;UBERON:0003528!1.11e-17!34;UBERON:0002780!1.36e-17!41;UBERON:0001890!1.36e-17!41;UBERON:0006240!1.36e-17!41;UBERON:0002346!2.27e-17!90;UBERON:0001893!2.76e-17!34;UBERON:0001017!5.20e-17!82;UBERON:0003080!5.66e-17!42;UBERON:0003075!1.15e-16!86;UBERON:0007284!1.15e-16!86;UBERON:0005743!1.82e-16!86;UBERON:0000073!1.93e-16!94;UBERON:0001016!1.93e-16!94;UBERON:0002791!2.52e-16!33;UBERON:0001869!5.49e-16!32;UBERON:0002616!5.76e-16!59;UBERON:0000955!2.21e-15!69;UBERON:0006238!2.21e-15!69;UBERON:0002619!2.73e-15!22;UBERON:0001950!5.65e-13!20;UBERON:0000956!7.21e-13!25;UBERON:0000203!7.21e-13!25;UBERON:0003056!1.38e-11!61;UBERON:0000924!7.75e-09!173;UBERON:0006601!7.75e-09!173;UBERON:0004121!2.77e-08!169;UBERON:0000033!4.00e-08!123;UBERON:0000153!8.82e-08!129;UBERON:0007811!8.82e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;2.97e-21;2!UBERON:0003978;1.67e-14;3!UBERON:0000946;1.67e-14;3!UBERON:0002134;8.61e-12;1!UBERON:0005208;8.61e-12;1!UBERON:0004145;8.61e-12;1!UBERON:0005946;8.61e-12;1!UBERON:0005965;8.61e-12;1!UBERON:0002078;8.61e-12;1!UBERON:0000989;3.11e-11;1!UBERON:0002135;3.11e-11;1!UBERON:0000941;3.11e-11;1!UBERON:0007195;3.11e-11;1!UBERON:0001785;3.11e-11;1!UBERON:0002464;3.11e-11;1!UBERON:0004904;3.11e-11;1!UBERON:0008811;3.11e-11;1!UBERON:0001021;3.11e-11;1!UBERON:0001950;5.57e-08;20!UBERON:0002619;2.68e-07;22!UBERON:0001871;8.85e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,4.70e-21,2;UBERON:0003978,2.26e-14,3;UBERON:0009751,2.26e-14,3;UBERON:0000946,2.26e-14,3;UBERON:0002523,2.26e-14,3;UBERON:0005983,2.26e-14,3;UBERON:0002165,2.26e-14,3;UBERON:0002062,2.26e-14,3;UBERON:0007280,2.26e-14,3;UBERON:0002134,8.62e-12,1;UBERON:0005208,8.62e-12,1;UBERON:0005946,8.62e-12,1;UBERON:0005965,8.62e-12,1;UBERON:0002078,8.62e-12,1;UBERON:0000989,2.68e-11,1;UBERON:0008811,2.68e-11,1;UBERON:0006258,2.68e-11,1;UBERON:0005876,2.68e-11,1;UBERON:0004874,2.68e-11,1;UBERON:0000941,3.28e-11,1;UBERON:0001785,3.28e-11,1;UBERON:0002464,3.28e-11,1;UBERON:0004904,3.28e-11,1;UBERON:0001021,3.28e-11,1;UBERON:0003902,3.28e-11,1;UBERON:0005425,3.28e-11,1;UBERON:0002135,4.91e-11,1;UBERON:0007195,5.43e-11,1;UBERON:0007023,4.99e-09,114;UBERON:0001950,5.63e-08,20;UBERON:0002619,2.71e-07,22;UBERON:0003075,8.36e-07,82;UBERON:0007284,8.36e-07,82;UBERON:0001871,9.12e-07,6 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0.242584061187816,0.697287110717054,1.23350366406548,0.309706370895104,0.575384784644301,0,0.709446689665756,0.344745680736619,0,0,0,0.545812300115692,0.224723484445085,0,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0,0,0,1.7587406567972,1.0429658368404,0.217188844705117,0,0,0,0,0,0,0,0,0,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0.623912584592421,0.713715955188647,0.788512075169673,0.702848489956279,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0.313359791546046,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,2.39138007897872,0,0.16480387422676,0,0.996239941255349,0.552567831062295,1.25966373927138,0,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.844175070377856,0,0.221158519862449,0,0.438770794307945,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,1.83309043480088,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.61214552326098,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0,0,0,0,1.11712960508902,0.687481272035051,15.0753335161131,0.599037001496973,0.429226048136571,0.446342914883745,0.671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0.160753148465019,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.681552087141687,0.113312091520126,0,0,0.387848869084652,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,2.07387654227596,0,0,0,0,0,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0,0.157265941855896,0.109209638192014,0,0.850299680406731,0.123935764259002,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,3.35231104020018,0.41023272848151,0.504143392443436,0.138314504928436,0.807378228159255,1.42769420259154,0,0,0,0,0,0,0,0,0.40341013740704,0,0.261906694481422,0,0,0.405225507710368,0,1.44680757550829,0.19024743058172,0.546974809018219,0,1.48863353516788,0,0,0,0,0,0,0,0.115233987555779,0,0.271878931907327,0.263091094251396,0,0,0.235479278551542,0.314231179832004,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0.0771741581079447,0.218559560503957,0,1.96118657403124,0,0,0.297046400327086,0.8453114551668,0.169927114687817,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0.436350690340377,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0.267964130156178,1.65833887891756,0.930896962757057,0,0.23806443146374,0,0,0,0,0.404234377916439,0,0.342233301085281,0,0,0,0,0,0,0,2.34640942403454,0.733448665097199,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p@chr12:2468720..2468724,+ | |||
}} |
Latest revision as of 07:38, 24 July 2015
Short description: | p@chr12:2468720..2468724, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:2468720..2468724, + |
Coexpression cluster: | C366_heart_vagina_adipose_diaphragm_left_aorta_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 4.70e-21 | 2 |
valve | 2.26e-14 | 3 |
cardiac mesenchyme | 2.26e-14 | 3 |
cardial valve | 2.26e-14 | 3 |
tunica intima | 2.26e-14 | 3 |
heart layer | 2.26e-14 | 3 |
endocardium | 2.26e-14 | 3 |
endocardial cushion | 2.26e-14 | 3 |
presumptive endocardium | 2.26e-14 | 3 |
tricuspid valve | 8.62e-12 | 1 |
right atrium valve | 8.62e-12 | 1 |
outflow tract of atrium | 8.62e-12 | 1 |
outflow part of right atrium | 8.62e-12 | 1 |
right cardiac atrium | 8.62e-12 | 1 |
penis | 2.68e-11 | 1 |
intromittent organ | 2.68e-11 | 1 |
lateral plate mesenchyme | 2.68e-11 | 1 |
undifferentiated genital tubercle | 2.68e-11 | 1 |
somatopleure | 2.68e-11 | 1 |
cranial nerve II | 3.28e-11 | 1 |
cranial nerve | 3.28e-11 | 1 |
nerve trunk | 3.28e-11 | 1 |
nerve connecting eye with brain | 3.28e-11 | 1 |
nerve | 3.28e-11 | 1 |
retinal neural layer | 3.28e-11 | 1 |
presumptive neural retina | 3.28e-11 | 1 |
mitral valve | 4.91e-11 | 1 |
stroma of bone marrow | 5.43e-11 | 1 |
adult organism | 4.99e-09 | 114 |
neocortex | 5.63e-08 | 20 |
regional part of cerebral cortex | 2.71e-07 | 22 |
neural plate | 8.36e-07 | 82 |
presumptive neural plate | 8.36e-07 | 82 |
temporal lobe | 9.12e-07 | 6 |