FFCP PHASE1:Hg19::chr12:2468720..2468724,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:2468720..2468724,+ | |||
|coexpression_cluster_id=C366 | |||
|description=CAGE_peak_at_chr12:2468720..2468724,+ | |description=CAGE_peak_at_chr12:2468720..2468724,+ | ||
|id=chr12:2468720..2468724,+ | |id=chr12:2468720..2468724,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.24e-11;1!UBERON:0005425;3.11e-11;1!UBERON:0004874;3.11e-11;1!UBERON:0005062;4.12e-11;4!UBERON:0007284;4.12e-11;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.53e-26!115;UBERON:0001049!1.15e-19!57;UBERON:0005068!1.15e-19!57;UBERON:0006241!1.15e-19!57;UBERON:0007135!1.15e-19!57;UBERON:0002020!1.11e-17!34;UBERON:0003528!1.11e-17!34;UBERON:0002780!1.36e-17!41;UBERON:0001890!1.36e-17!41;UBERON:0006240!1.36e-17!41;UBERON:0002346!2.27e-17!90;UBERON:0001893!2.76e-17!34;UBERON:0001017!5.20e-17!82;UBERON:0003080!5.66e-17!42;UBERON:0003075!1.15e-16!86;UBERON:0007284!1.15e-16!86;UBERON:0005743!1.82e-16!86;UBERON:0000073!1.93e-16!94;UBERON:0001016!1.93e-16!94;UBERON:0002791!2.52e-16!33;UBERON:0001869!5.49e-16!32;UBERON:0002616!5.76e-16!59;UBERON:0000955!2.21e-15!69;UBERON:0006238!2.21e-15!69;UBERON:0002619!2.73e-15!22;UBERON:0001950!5.65e-13!20;UBERON:0000956!7.21e-13!25;UBERON:0000203!7.21e-13!25;UBERON:0003056!1.38e-11!61;UBERON:0000924!7.75e-09!173;UBERON:0006601!7.75e-09!173;UBERON:0004121!2.77e-08!169;UBERON:0000033!4.00e-08!123;UBERON:0000153!8.82e-08!129;UBERON:0007811!8.82e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;2.97e-21;2!UBERON:0003978;1.67e-14;3!UBERON:0000946;1.67e-14;3!UBERON:0002134;8.61e-12;1!UBERON:0005208;8.61e-12;1!UBERON:0004145;8.61e-12;1!UBERON:0005946;8.61e-12;1!UBERON:0005965;8.61e-12;1!UBERON:0002078;8.61e-12;1!UBERON:0000989;3.11e-11;1!UBERON:0002135;3.11e-11;1!UBERON:0000941;3.11e-11;1!UBERON:0007195;3.11e-11;1!UBERON:0001785;3.11e-11;1!UBERON:0002464;3.11e-11;1!UBERON:0004904;3.11e-11;1!UBERON:0008811;3.11e-11;1!UBERON:0001021;3.11e-11;1!UBERON:0001950;5.57e-08;20!UBERON:0002619;2.68e-07;22!UBERON:0001871;8.85e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,4.70e-21,2;UBERON:0003978,2.26e-14,3;UBERON:0009751,2.26e-14,3;UBERON:0000946,2.26e-14,3;UBERON:0002523,2.26e-14,3;UBERON:0005983,2.26e-14,3;UBERON:0002165,2.26e-14,3;UBERON:0002062,2.26e-14,3;UBERON:0007280,2.26e-14,3;UBERON:0002134,8.62e-12,1;UBERON:0005208,8.62e-12,1;UBERON:0005946,8.62e-12,1;UBERON:0005965,8.62e-12,1;UBERON:0002078,8.62e-12,1;UBERON:0000989,2.68e-11,1;UBERON:0008811,2.68e-11,1;UBERON:0006258,2.68e-11,1;UBERON:0005876,2.68e-11,1;UBERON:0004874,2.68e-11,1;UBERON:0000941,3.28e-11,1;UBERON:0001785,3.28e-11,1;UBERON:0002464,3.28e-11,1;UBERON:0004904,3.28e-11,1;UBERON:0001021,3.28e-11,1;UBERON:0003902,3.28e-11,1;UBERON:0005425,3.28e-11,1;UBERON:0002135,4.91e-11,1;UBERON:0007195,5.43e-11,1;UBERON:0007023,4.99e-09,114;UBERON:0001950,5.63e-08,20;UBERON:0002619,2.71e-07,22;UBERON:0003075,8.36e-07,82;UBERON:0007284,8.36e-07,82;UBERON:0001871,9.12e-07,6 | |||
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| ||
|short_description=p@chr12:2468720..2468724,+ | |short_description=p@chr12:2468720..2468724,+ | ||
}} | }} |
Latest revision as of 07:38, 24 July 2015
Short description: | p@chr12:2468720..2468724, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:2468720..2468724, + |
Coexpression cluster: | C366_heart_vagina_adipose_diaphragm_left_aorta_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 4.70e-21 | 2 |
valve | 2.26e-14 | 3 |
cardiac mesenchyme | 2.26e-14 | 3 |
cardial valve | 2.26e-14 | 3 |
tunica intima | 2.26e-14 | 3 |
heart layer | 2.26e-14 | 3 |
endocardium | 2.26e-14 | 3 |
endocardial cushion | 2.26e-14 | 3 |
presumptive endocardium | 2.26e-14 | 3 |
tricuspid valve | 8.62e-12 | 1 |
right atrium valve | 8.62e-12 | 1 |
outflow tract of atrium | 8.62e-12 | 1 |
outflow part of right atrium | 8.62e-12 | 1 |
right cardiac atrium | 8.62e-12 | 1 |
penis | 2.68e-11 | 1 |
intromittent organ | 2.68e-11 | 1 |
lateral plate mesenchyme | 2.68e-11 | 1 |
undifferentiated genital tubercle | 2.68e-11 | 1 |
somatopleure | 2.68e-11 | 1 |
cranial nerve II | 3.28e-11 | 1 |
cranial nerve | 3.28e-11 | 1 |
nerve trunk | 3.28e-11 | 1 |
nerve connecting eye with brain | 3.28e-11 | 1 |
nerve | 3.28e-11 | 1 |
retinal neural layer | 3.28e-11 | 1 |
presumptive neural retina | 3.28e-11 | 1 |
mitral valve | 4.91e-11 | 1 |
stroma of bone marrow | 5.43e-11 | 1 |
adult organism | 4.99e-09 | 114 |
neocortex | 5.63e-08 | 20 |
regional part of cerebral cortex | 2.71e-07 | 22 |
neural plate | 8.36e-07 | 82 |
presumptive neural plate | 8.36e-07 | 82 |
temporal lobe | 9.12e-07 | 6 |