FFCP PHASE1:Hg19::chr12:16941106..16941119,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:16941106..16941119,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_at_chr12:16941106..16941119,- | |description=CAGE_peak_at_chr12:16941106..16941119,- | ||
|id=chr12:16941106..16941119,- | |id=chr12:16941106..16941119,- | ||
|ontology_enrichment_celltype=CL:0000242!1.57e-37!2;CL:0000095!1.02e-15!17;CL:0000123!1.02e-15!17;CL:0000312!1.13e-15!5;CL:0000240!3.14e-13!6;CL:0000311!3.14e-13!6;CL:0000079!3.14e-13!6;CL:0000237!3.14e-13!6;CL:0000036!3.14e-13!6;CL:0000357!3.14e-13!6;CL:0000114!3.14e-13!6;CL:0002319!3.63e-11!25;CL:0000362!3.68e-10!8;CL:0000333!4.08e-07!41 | |ontology_enrichment_celltype=CL:0000242!1.57e-37!2;CL:0000095!1.02e-15!17;CL:0000123!1.02e-15!17;CL:0000312!1.13e-15!5;CL:0000240!3.14e-13!6;CL:0000311!3.14e-13!6;CL:0000079!3.14e-13!6;CL:0000237!3.14e-13!6;CL:0000036!3.14e-13!6;CL:0000357!3.14e-13!6;CL:0000114!3.14e-13!6;CL:0002319!3.63e-11!25;CL:0000362!3.68e-10!8;CL:0000333!4.08e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.34e-79;2!CL:0000242;2.34e-79;2!CL:0000312;1.44e-32;5!CL:0000240;2.38e-27;6!CL:0000311;2.38e-27;6!CL:0000079;2.38e-27;6!CL:0000237;2.38e-27;6!CL:0000095;1.58e-19;17!CL:0000362;1.24e-18;9!CL:0002319;5.18e-14;25!CL:0002159;2.24e-12;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.56e-79,2;CL:0000312,1.23e-32,5;CL:0000240,2.08e-27,6;CL:0000311,2.08e-27,6;CL:0000079,2.08e-27,6;CL:0000237,2.08e-27,6;CL:0000036,2.08e-27,6;CL:0000357,2.08e-27,6;CL:0000114,2.08e-27,6;CL:0000095,1.48e-19,17;CL:0000123,1.48e-19,17;CL:0000362,1.13e-18,9;CL:0002319,4.96e-14,25;CL:0002159,2.12e-12,14;CL:0000333,4.09e-09,41 | |||
|ontology_enrichment_development_v019=CL:0000357;2.38e-27;6!CL:0000114;2.38e-27;6 | |||
|ontology_enrichment_disease=DOID:3093!5.47e-07!11 | |ontology_enrichment_disease=DOID:3093!5.47e-07!11 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000988!1.01e-24!3;UBERON:0002148!2.49e-10!2;UBERON:0009662!2.49e-10!2;UBERON:0000007!2.72e-10!2;UBERON:0002298!6.63e-10!8;UBERON:0000955!5.41e-09!69;UBERON:0006238!5.41e-09!69;UBERON:0002680!6.61e-09!9;UBERON:0001895!6.61e-09!9;UBERON:0010092!6.61e-09!9;UBERON:0001017!1.44e-07!82;UBERON:0006331!2.63e-07!3;UBERON:0005743!3.25e-07!86;UBERON:0004733!6.74e-07!12;UBERON:0002028!6.74e-07!12;UBERON:0007277!6.74e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.27e-11;15!UBERON:0007376;1.27e-11;15!UBERON:0001871;6.04e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.21e-11,15;UBERON:0007376,1.21e-11,15;UBERON:0007383,1.21e-11,15;UBERON:0001871,6.39e-07,6 | |||
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|short_description=p@chr12:16941106..16941119,- | |short_description=p@chr12:16941106..16941119,- | ||
}} | }} |
Latest revision as of 07:17, 24 July 2015
Short description: | p@chr12:16941106..16941119, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:16941106..16941119, - |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.56e-79 | 2 |
keratinocyte | 1.23e-32 | 5 |
stratified squamous epithelial cell | 2.08e-27 | 6 |
keratin accumulating cell | 2.08e-27 | 6 |
stratified epithelial cell | 2.08e-27 | 6 |
keratinizing barrier epithelial cell | 2.08e-27 | 6 |
epithelial fate stem cell | 2.08e-27 | 6 |
stratified epithelial stem cell | 2.08e-27 | 6 |
surface ectodermal cell | 2.08e-27 | 6 |
neuron associated cell | 1.48e-19 | 17 |
neuron associated cell (sensu Vertebrata) | 1.48e-19 | 17 |
epidermal cell | 1.13e-18 | 9 |
neural cell | 4.96e-14 | 25 |
general ecto-epithelial cell | 2.12e-12 | 14 |
migratory neural crest cell | 4.09e-09 | 41 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.21e-11 | 15 |
outer epithelium | 1.21e-11 | 15 |
enveloping layer of ectoderm | 1.21e-11 | 15 |
temporal lobe | 6.39e-07 | 6 |