FFCP PHASE1:Hg19::chr12:15942469..15942488,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:15942469..15942488,+
|short_description=p@chr12:15942469..15942488,+
|description=CAGE_peak_at_chr12:15942469..15942488,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:15942469..15942488,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr12:15942469..15942488,+ | |||
|id=chr12:15942469..15942488,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.03e-17;1!CL:0002625;1.03e-17;1!CL:0000216;1.03e-17;1!CL:0000154;6.70e-12;6!CL:0002521;7.28e-07;3!CL:0002567;9.11e-07;3!CL:0002623;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,6.23e-18,1;CL:0002625,6.23e-18,1;CL:0000216,6.23e-18,1;CL:0000154,5.08e-12,6;CL:0002521,7.28e-07,3;CL:0002623,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.02e-07;10!UBERON:0005564;1.02e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.88e-19;8!UBERON:0001136;1.03e-17;1!UBERON:0001343;1.03e-17;1!UBERON:0004910;1.03e-17;1!UBERON:0004813;1.03e-17;1!UBERON:0003135;2.46e-14;11!UBERON:0004909;1.57e-09;2!UBERON:0000991;8.66e-08;21!UBERON:0003101;1.85e-07;22!UBERON:0000079;1.85e-07;22!UBERON:0002190;7.28e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.56e-19,8;UBERON:0001136,6.23e-18,1;UBERON:0001343,6.23e-18,1;UBERON:0004910,6.23e-18,1;UBERON:0005154,6.23e-18,1;UBERON:0005295,6.23e-18,1;UBERON:0004813,6.23e-18,1;UBERON:0005297,6.23e-18,1;UBERON:0005294,6.23e-18,1;UBERON:0010141,6.23e-18,1;UBERON:0005891,6.23e-18,1;UBERON:0003135,2.15e-14,11;UBERON:0004909,1.22e-09,2;UBERON:0000991,8.08e-08,21;UBERON:0009196,8.08e-08,21;UBERON:0009117,8.08e-08,21;UBERON:0005564,8.08e-08,21;UBERON:0004176,1.73e-07,22;UBERON:0003101,1.73e-07,22;UBERON:0000079,1.73e-07,22;UBERON:0002190,7.28e-07,3 | |||
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| ||
|short_description=p@chr12:15942469..15942488,+ | |||
}} | }} |
Latest revision as of 07:12, 24 July 2015
Short description: | p@chr12:15942469..15942488, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:15942469..15942488, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 6.23e-18 | 1 |
seminiferous tubule epithelial cell | 6.23e-18 | 1 |
Sertoli cell | 6.23e-18 | 1 |
protein secreting cell | 5.08e-12 | 6 |
subcutaneous fat cell | 7.28e-07 | 3 |
acinar cell of salivary gland | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.56e-19 | 8 |
mesothelium | 6.23e-18 | 1 |
seminiferous tubule of testis | 6.23e-18 | 1 |
epithelium of male gonad | 6.23e-18 | 1 |
epithelial cord | 6.23e-18 | 1 |
sex cord | 6.23e-18 | 1 |
seminiferous tubule epithelium | 6.23e-18 | 1 |
testis sex cord | 6.23e-18 | 1 |
genital ridge | 6.23e-18 | 1 |
primitive sex cord of indifferent gonad | 6.23e-18 | 1 |
coelomic epithelium | 6.23e-18 | 1 |
male reproductive organ | 2.15e-14 | 11 |
epithelium of gonad | 1.22e-09 | 2 |
gonad | 8.08e-08 | 21 |
indifferent external genitalia | 8.08e-08 | 21 |
indifferent gonad | 8.08e-08 | 21 |
gonad primordium | 8.08e-08 | 21 |
external genitalia | 1.73e-07 | 22 |
male organism | 1.73e-07 | 22 |
male reproductive system | 1.73e-07 | 22 |
subcutaneous adipose tissue | 7.28e-07 | 3 |