FFCP PHASE1:Hg19::chr12:13369220..13369235,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:13369220..13369235,+ | |||
|description=CAGE_peak_at_chr12:13369220..13369235,+ | |description=CAGE_peak_at_chr12:13369220..13369235,+ | ||
|id=chr12:13369220..13369235,+ | |id=chr12:13369220..13369235,+ | ||
|ontology_enrichment_celltype=CL:0000057!2.45e-11!75;CL:0000048!3.13e-08!430;CL:0002320!4.92e-08!365;CL:0000723!6.99e-08!436;CL:0000134!8.74e-08!358;CL:0002371!2.23e-07!591;CL:0000034!4.43e-07!444 | |ontology_enrichment_celltype=CL:0000057!2.45e-11!75;CL:0000048!3.13e-08!430;CL:0002320!4.92e-08!365;CL:0000723!6.99e-08!436;CL:0000134!8.74e-08!358;CL:0002371!2.23e-07!591;CL:0000034!4.43e-07!444 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;2.40e-18;33!CL:0002057;2.40e-18;33!CL:0000473;4.23e-17;39!CL:0000234;4.23e-17;39!CL:0000135;4.11e-15;3!CL:0000388;4.11e-15;3!CL:0000576;1.39e-10;48!CL:0002541;6.91e-07;3!CL:0000214;6.91e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.01e-18,48;CL:0000234,2.01e-18,48;CL:0000860,9.06e-16,42;CL:0002057,9.06e-16,42;CL:0000135,3.76e-15,3;CL:0000388,3.76e-15,3;CL:0002194,4.59e-14,59;CL:0000576,4.59e-14,59;CL:0000040,4.59e-14,59;CL:0000559,4.59e-14,59;CL:0002009,1.67e-13,61;CL:0000839,3.01e-12,66;CL:0000557,5.09e-12,67;CL:0000766,5.68e-11,72;CL:0000134,1.34e-08,354;CL:0002320,2.74e-08,361;CL:0000219,6.88e-08,386;CL:0000048,8.31e-08,427;CL:0000723,1.38e-07,433;CL:0000034,2.64e-07,441;CL:0000214,4.67e-07,3;CL:0002541,7.14e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.90e-11;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.17e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.11e-15;3!UBERON:0000043;4.11e-15;3!UBERON:0007845;4.11e-15;3!UBERON:0005406;7.19e-11;2!UBERON:0005631;1.38e-07;10!UBERON:0000158;1.38e-07;10!UBERON:0006915;6.91e-07;3!UBERON:0007616;6.91e-07;3!UBERON:0002217;6.91e-07;3!UBERON:0002018;6.91e-07;3!UBERON:0003124;6.91e-07;3!UBERON:0000920;6.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.76e-15,3;UBERON:0000043,3.76e-15,3;UBERON:0007845,3.76e-15,3;UBERON:0005406,6.10e-11,2;UBERON:0002371,3.11e-10,76;UBERON:0001434,2.14e-09,100;UBERON:0001474,2.92e-09,82;UBERON:0002405,5.04e-09,93;UBERON:0002204,2.95e-08,167;UBERON:0004765,3.61e-08,90;UBERON:0002384,7.28e-08,371;UBERON:0002193,2.56e-07,108;UBERON:0002390,2.94e-07,98;UBERON:0003061,2.94e-07,98;UBERON:0006915,4.67e-07,3;UBERON:0007616,4.67e-07,3;UBERON:0002217,4.67e-07,3;UBERON:0002018,4.67e-07,3;UBERON:0000920,7.14e-07,3 | |||
|phase1_expression=0.181678379270557,1.92690471501885,0.140954404095971,4.00293193412522,0.446961094427288,5.23403114460221,0,1.26343974685366,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01778767145695,0.755751887377619,1.4555043671269,0.232429036905685,0,0.619412741790207,4.02769349251011,1.5369642391746,0.945928919554341,0.344745680736619,0.645484683583826,0,1.12945403725563,1.09162460023138,0.224723484445085,1.83650335422542,0,3.19668562899521,1.64925650093358,0.598390972864896,0.852449501065388,0,0,1.24564449799115,5.27622197039161,3.65038042894141,1.73751075764093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,1.44575660953827,0,0.434539556882471,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.976248230192678,0.367663080345869,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,1.43418310374407,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.936480230490962,0,2.09228152772521,0,0.647491777472526,0.561803226808994,0.61246251376468,0.61417158655884,0.206651562351531,0,0.741800787835671,0,0,0.673344455816265,0.250237039743928,0,0,0.30648779579902,0.45071417671979,0.113432183160021,0.538168907066586,0.213557388818567,0.211931901159562,0.900273288253207,0.103052529238439,0,0.18611685633159,0.675105328965065,0.194874010322397,0.757301322732344,0.276149695926898,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0.144366447761074,1.38895653772983,0.761016608938393,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0.308482478109971,0,0,0,0.43596006883328,0.07333828582095,0.258543431515556,0,3.381211010224,0,0,0.771622122786426,0,0,0,0,0,0.977208552881205,0,0,0,0,0.199945982364114,2.43247561282381,0.502257091432126,6.32501818449095,0.479249710983165,0,0,0.579125226670317,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,0,0.415941723061614,1.07057393278297,0.157702415033935,0.35142424497814,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.841980283299221,0.384417447767103,0,0.482561763430822,2.96836132889982,1.23367755042124,0.887808626565635,0.410635780069046,0,1.16210378459959,0,0.200506470303285,0.0920809889358963,0,0.910455840033585,0.262248829918848,0,0,0,0,0,0,0.510281115829547,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.290012154876366,1.07834031980251,0.767518373630648,0.413509717453592,0.107420244868274,0.725083469571143,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0.359744915166629,0,0.471249609382746,0,0,0,0,0.731140468893853,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,1.97576935775941,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,2.3874448473769,0.296964680832639,2.45728561679386,0,0,0.667852230137435,0,0.63337622438398,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,1.91400695839152,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0.242780379534093,0.394584402849391,0,0,0,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0.867798691675654,0.195984794828755,0,0.34945333648406,0.343972064943233,0,0,0.0821154570532092,0.678923115418936,0,0.225980740780532,0.274083849293502,0,0.0633107959558787,0,0.0801588202515337,0,0.39961921916426,0,0,0,0.14405479798815,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0.335434687599266,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.612691153526923,0.327872630709804,0,0,0.488105059607853,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.895528817321244,0.701139929541673,0.554805861502613,0.378806010550178,0.50313580350515,0,0.686520205190771,0.756154618816195,0.621748802331122,0.147855149989634,0.318593534327405,0,0.465788870628778,0.414706207840855,0.53168342911599,0.521745061811734,0,0.761610424337591,0.406870733204662,0.545545977607678,0.214821114084977,0,0,0.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| ||
|short_description=p@chr12:13369220..13369235,+ | |short_description=p@chr12:13369220..13369235,+ | ||
}} | }} |
Latest revision as of 06:59, 24 July 2015
Short description: | p@chr12:13369220..13369235, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13369220..13369235, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.01e-18 | 48 |
phagocyte | 2.01e-18 | 48 |
classical monocyte | 9.06e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.06e-16 | 42 |
fibrocyte | 3.76e-15 | 3 |
tendon cell | 3.76e-15 | 3 |
monopoietic cell | 4.59e-14 | 59 |
monocyte | 4.59e-14 | 59 |
monoblast | 4.59e-14 | 59 |
promonocyte | 4.59e-14 | 59 |
macrophage dendritic cell progenitor | 1.67e-13 | 61 |
myeloid lineage restricted progenitor cell | 3.01e-12 | 66 |
granulocyte monocyte progenitor cell | 5.09e-12 | 67 |
myeloid leukocyte | 5.68e-11 | 72 |
mesenchymal cell | 1.34e-08 | 354 |
connective tissue cell | 2.74e-08 | 361 |
motile cell | 6.88e-08 | 386 |
multi fate stem cell | 8.31e-08 | 427 |
somatic stem cell | 1.38e-07 | 433 |
stem cell | 2.64e-07 | 441 |
synovial cell | 4.67e-07 | 3 |
chorionic membrane mesenchymal stem cell | 7.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.76e-15 | 3 |
tendon | 3.76e-15 | 3 |
regular connective tissue | 3.76e-15 | 3 |
perirenal fat | 6.10e-11 | 2 |
bone marrow | 3.11e-10 | 76 |
skeletal system | 2.14e-09 | 100 |
bone element | 2.92e-09 | 82 |
immune system | 5.04e-09 | 93 |
musculoskeletal system | 2.95e-08 | 167 |
skeletal element | 3.61e-08 | 90 |
connective tissue | 7.28e-08 | 371 |
hemolymphoid system | 2.56e-07 | 108 |
hematopoietic system | 2.94e-07 | 98 |
blood island | 2.94e-07 | 98 |
stratified squamous epithelium | 4.67e-07 | 3 |
layer of synovial tissue | 4.67e-07 | 3 |
synovial joint | 4.67e-07 | 3 |
synovial membrane of synovial joint | 4.67e-07 | 3 |
egg chorion | 7.14e-07 | 3 |