FFCP PHASE1:Hg19::chr12:133287259..133287269,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:133287259..133287269,- | |||
|description=CAGE_peak_at_chr12:133287259..133287269,- | |description=CAGE_peak_at_chr12:133287259..133287269,- | ||
|id=chr12:133287259..133287269,- | |id=chr12:133287259..133287269,- | ||
|ontology_enrichment_celltype=CL:0000542!2.54e-12!53;CL:0000051!2.54e-12!53;CL:0000838!7.12e-12!52;CL:0000738!7.49e-12!140;CL:0002031!1.77e-11!124;CL:0002087!6.99e-11!119;CL:0000037!1.79e-09!172;CL:0000566!1.79e-09!172;CL:0002032!6.36e-09!165;CL:0000837!6.36e-09!165;CL:0000988!2.78e-08!182;CL:0000945!4.34e-07!24;CL:0000826!4.34e-07!24 | |ontology_enrichment_celltype=CL:0000542!2.54e-12!53;CL:0000051!2.54e-12!53;CL:0000838!7.12e-12!52;CL:0000738!7.49e-12!140;CL:0002031!1.77e-11!124;CL:0002087!6.99e-11!119;CL:0000037!1.79e-09!172;CL:0000566!1.79e-09!172;CL:0002032!6.36e-09!165;CL:0000837!6.36e-09!165;CL:0000988!2.78e-08!182;CL:0000945!4.34e-07!24;CL:0000826!4.34e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000895;2.44e-09;1!CL:0000791;2.74e-07;18!CL:0000789;2.74e-07;18!CL:0002419;2.74e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,1.43e-09,1;CL:0000895,1.43e-09,1;CL:0002436,1.43e-09,1;CL:0002427,1.43e-09,1;CL:0002428,1.43e-09,1;CL:0002429,1.43e-09,1;CL:0002433,1.43e-09,1;CL:0002431,1.43e-09,1;CL:0002432,1.43e-09,1;CL:0000791,3.36e-07,18;CL:0000789,3.36e-07,18;CL:0002420,3.36e-07,18;CL:0002419,3.36e-07,18;CL:0000790,3.36e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002427;2.44e-09;1!CL:0000790;2.74e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;3.75e-09;4!DOID:1612;3.75e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.55e-09,4;DOID:1612,2.55e-09,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.99e-09,4;UBERON:0005058,3.99e-09,4;UBERON:0009113,3.99e-09,4;UBERON:0003295,3.99e-09,4;UBERON:0005562,3.99e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0.152826811495903,0.164201178899891,0.236132343941038,0.393364276848904,0,0,0,0,1.10926203050036,0.92960640696362,0.710846162437108,0.293600439334847,0,0.200544447470142,0.651032612147555,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0.28769239232215,0,0.47296445977717,0.689491361473237,0,1.35426486594342,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,1.24564449799115,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0,0.182664153764634,0,1.63841583378639,0.889509253863555,1.28019066769952,0,0,0.661044872784862,0.954053754535364,0.569212969109448,0,0.764546456250458,1.32171328579026,0,0.263384084775077,0.590129310341499,1.17903228824749,0.822405995998037,0.334372990781356,0.977766799900771,0,1.94826728407911,0.445641827540694,0.589211814949674,1.10766947291811,1.08321545506006,0.25618263945135,0.390178042679635,0.164437904603676,0,0.579606171470105,0.889719378972363,0.267540828089713,0,0.226618685395132,1.53288197440768,0.68725489096526,0.506039384039006,0.318565414324097,0,0,0,0.511946444617674,1.24930726552346,0,0,0.80642697289893,1.06976078313403,0.579297615531196,0,0.670700859703636,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.130979075497713,0,0,0,0.174129737299267,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0.805658634218294,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0.529636723252875,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0,0,0.232387885739037,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.220587945464788,0.435758888184812,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,2.07328115540772,0.288239906833923,0.75745460055828,0,0.381988425558278,0,0,0,0,0,0.336393253036082,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.224170287987055,0.788123040807709,0.215627574859517,0.385029108839245,0.254094624222463,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0.320182673410333,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0,0.106824071127473,0,0,0.371606350251437,0.144269212976445,0.0711418433484141,0,0,0.383010740264733,0.211673582723883,0,0,0,0,2.50634477090067,0.338583555603207,0.1605880751037,0,1.27753871307098,0,0.307240764308458,0.447352215784832,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0.445773537109913,0,0,0.296964680832639,0,0,0,0.222617410045812,0.329607748453519,0,0,0.276283915531148,0,0,0.246169610922139,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0.7812832832557,0.174919999992391,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0.482385754501632,1.52581736317083,0.663475559587348,0,0.219385397153973,0,0.139423744278603,0.0769502585037971,0.113942055847001,0.23056390438806,0,0.108647371922008,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0.364909578431332,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0.450970258243478,0.207376382794494,0,0,0.313932918407225,0,0,0,0,0.293977192243133,0.34823682632161,0.17472666824203,0,0,0.146178634172371,0.164230914106418,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0,0,0.144090417154106,0.343609788497747,0.171594997861965,0.14405479798815,0,0.707082103850386,0.407712618220842,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0.164831716762333,0.0674035438541849,0.295282444544246,0.254019996197353,0,0.272406812223151,0.160753148465019,0,0,0,1.5476039091159,0,0,0.0788057072991982,0.0524545881349981,0.10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| ||
|short_description=p@chr12:133287259..133287269,- | |short_description=p@chr12:133287259..133287269,- | ||
}} | }} |
Latest revision as of 06:54, 24 July 2015
Short description: | p@chr12:133287259..133287269, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:133287259..133287269, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 1.43e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.43e-09 | 1 |
mature CD4 single-positive thymocyte | 1.43e-09 | 1 |
resting double-positive thymocyte | 1.43e-09 | 1 |
double-positive blast | 1.43e-09 | 1 |
CD69-positive double-positive thymocyte | 1.43e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.43e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.43e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.43e-09 | 1 |
mature alpha-beta T cell | 3.36e-07 | 18 |
alpha-beta T cell | 3.36e-07 | 18 |
immature T cell | 3.36e-07 | 18 |
mature T cell | 3.36e-07 | 18 |
immature alpha-beta T cell | 3.36e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.99e-09 | 4 |
hemolymphoid system gland | 3.99e-09 | 4 |
thymic region | 3.99e-09 | 4 |
pharyngeal gland | 3.99e-09 | 4 |
thymus primordium | 3.99e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.55e-09 | 4 |
breast cancer | 2.55e-09 | 4 |