FFCP PHASE1:Hg19::chr12:128077388..128077416,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:128077388..128077416,+ | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr12:128077388..128077416,+ | |||
|id=chr12:128077388..128077416,+ | |||
|ontology_enrichment_celltype=CL:0000167!9.99e-30!1;CL:0000164!9.99e-30!1;CL:0000502!9.99e-30!1;CL:0000172!9.99e-30!1;CL:0000173!9.99e-30!1;CL:0002351!9.99e-30!1;CL:0000946!1.78e-29!1;CL:0000786!1.78e-29!1;CL:0000980!1.78e-29!1;CL:0000785!1.78e-15!2;CL:0000955!1.78e-15!2;CL:0000818!1.78e-15!2;CL:0000954!1.78e-15!2;CL:0000816!1.78e-15!2;CL:0000817!8.99e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0000167;3.34e-66;1!CL:0000164;3.34e-66;1!CL:0000502;3.34e-66;1!CL:0000172;3.34e-66;1!CL:0000173;3.34e-66;1!CL:0000150;1.16e-08;9!CL:0000163;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.39e-66,1;CL:0000164,2.39e-66,1;CL:0000502,2.39e-66,1;CL:0000172,2.39e-66,1;CL:0000173,2.39e-66,1;CL:0002351,2.39e-66,1;CL:0000150,1.12e-08,9;CL:0000163,1.12e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002351;3.34e-66;1 | |||
|ontology_enrichment_disease=DOID:4430!9.99e-30!1;DOID:5409!1.96e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:4430;3.34e-66;1!DOID:5409;9.45e-18;4!DOID:169;2.59e-12;6!DOID:1325;9.43e-11;7!DOID:3904;9.43e-11;7!DOID:3905;1.16e-08;9!DOID:171;6.34e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.39e-66,1;DOID:5409,1.03e-17,4;DOID:169,2.45e-12,6;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9;DOID:171,6.13e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001873!2.05e-15!2;UBERON:0010122!2.05e-15!2;UBERON:0005383!9.90e-11!3;UBERON:0005382!9.90e-11!3;UBERON:0000369!2.26e-08!4;UBERON:0002435!2.26e-08!4;UBERON:0000204!2.26e-08!4;UBERON:0010082!2.26e-08!4;UBERON:0002046!6.39e-07!5;UBERON:0004117!6.39e-07!5;UBERON:0007689!6.39e-07!5;UBERON:0007123!6.39e-07!5;UBERON:0003091!6.39e-07!5 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50962843566674,0,0,37.6253837089218,0,1.88541237681301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:128077388..128077416,+ | |||
}} |
Latest revision as of 06:37, 24 July 2015
Short description: | p@chr12:128077388..128077416, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:128077388..128077416, + |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.39e-66 | 1 |
enteroendocrine cell | 2.39e-66 | 1 |
type D enteroendocrine cell | 2.39e-66 | 1 |
somatostatin secreting cell | 2.39e-66 | 1 |
pancreatic D cell | 2.39e-66 | 1 |
progenitor cell of endocrine pancreas | 2.39e-66 | 1 |
glandular epithelial cell | 1.12e-08 | 9 |
endocrine cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.39e-66 | 1 |
lung small cell carcinoma | 1.03e-17 | 4 |
neuroendocrine tumor | 2.45e-12 | 6 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |
neuroectodermal tumor | 6.13e-08 | 10 |