FFCP PHASE1:Hg19::chr12:12592823..12592837,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:12592823..12592837,+ | |||
|coexpression_cluster_id=C167 | |||
|description=CAGE_peak_at_chr12:12592823..12592837,+ | |description=CAGE_peak_at_chr12:12592823..12592837,+ | ||
|id=chr12:12592823..12592837,+ | |id=chr12:12592823..12592837,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.06e-32!140;CL:0000037!2.44e-24!172;CL:0000566!2.44e-24!172;CL:0002087!1.84e-23!119;CL:0000766!4.07e-23!76;CL:0000988!1.93e-22!182;CL:0000094!5.80e-22!8;CL:0002032!2.10e-21!165;CL:0000837!2.10e-21!165;CL:0002057!4.24e-21!42;CL:0000624!1.65e-19!6;CL:0000860!2.19e-19!45;CL:0002031!4.74e-19!124;CL:0000791!1.22e-16!18;CL:0000789!1.22e-16!18;CL:0002420!1.22e-16!18;CL:0002419!1.22e-16!18;CL:0000790!1.22e-16!18;CL:0000081!1.19e-15!11;CL:0000763!1.32e-13!112;CL:0000049!1.32e-13!112;CL:0002194!2.66e-12!63;CL:0000576!2.66e-12!63;CL:0000040!2.66e-12!63;CL:0000559!2.66e-12!63;CL:0000839!5.12e-12!70;CL:0000767!7.35e-12!3;CL:0002009!8.49e-12!65;CL:0000557!8.71e-12!71;CL:0000084!2.11e-11!25;CL:0000827!2.11e-11!25;CL:0000623!4.13e-11!3;CL:0000825!4.13e-11!3;CL:0000898!8.37e-11!3;CL:0000842!1.38e-10!3;CL:0000771!1.79e-08!2;CL:0000224!4.84e-08!4;CL:0000838!5.33e-08!52;CL:0000542!8.52e-08!53;CL:0000051!8.52e-08!53;CL:0000134!1.01e-07!358;CL:0000815!1.15e-07!2;CL:0000792!1.15e-07!2;CL:0002677!1.15e-07!2;CL:0002320!2.20e-07!365 | |ontology_enrichment_celltype=CL:0000738!3.06e-32!140;CL:0000037!2.44e-24!172;CL:0000566!2.44e-24!172;CL:0002087!1.84e-23!119;CL:0000766!4.07e-23!76;CL:0000988!1.93e-22!182;CL:0000094!5.80e-22!8;CL:0002032!2.10e-21!165;CL:0000837!2.10e-21!165;CL:0002057!4.24e-21!42;CL:0000624!1.65e-19!6;CL:0000860!2.19e-19!45;CL:0002031!4.74e-19!124;CL:0000791!1.22e-16!18;CL:0000789!1.22e-16!18;CL:0002420!1.22e-16!18;CL:0002419!1.22e-16!18;CL:0000790!1.22e-16!18;CL:0000081!1.19e-15!11;CL:0000763!1.32e-13!112;CL:0000049!1.32e-13!112;CL:0002194!2.66e-12!63;CL:0000576!2.66e-12!63;CL:0000040!2.66e-12!63;CL:0000559!2.66e-12!63;CL:0000839!5.12e-12!70;CL:0000767!7.35e-12!3;CL:0002009!8.49e-12!65;CL:0000557!8.71e-12!71;CL:0000084!2.11e-11!25;CL:0000827!2.11e-11!25;CL:0000623!4.13e-11!3;CL:0000825!4.13e-11!3;CL:0000898!8.37e-11!3;CL:0000842!1.38e-10!3;CL:0000771!1.79e-08!2;CL:0000224!4.84e-08!4;CL:0000838!5.33e-08!52;CL:0000542!8.52e-08!53;CL:0000051!8.52e-08!53;CL:0000134!1.01e-07!358;CL:0000815!1.15e-07!2;CL:0000792!1.15e-07!2;CL:0002677!1.15e-07!2;CL:0002320!2.20e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000094;5.06e-59;8!CL:0000081;8.70e-43;11!CL:0000767;4.59e-30;3!CL:0000771;1.38e-20;2!CL:0000775;5.37e-14;3!CL:0000898;1.93e-13;3!CL:0000623;1.93e-13;3!CL:0000895;1.05e-10;1!CL:0000766;2.18e-07;69!CL:0000624;3.68e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,5.09e-59,8;CL:0000081,8.73e-43,11;CL:0000767,4.60e-30,3;CL:0000771,1.14e-20,2;CL:0000738,8.96e-20,136;CL:0000766,5.16e-17,72;CL:0000037,1.64e-15,168;CL:0000988,1.38e-14,177;CL:0002032,2.43e-14,161;CL:0000837,2.43e-14,161;CL:0000775,6.12e-14,3;CL:0000623,1.32e-13,3;CL:0000825,1.32e-13,3;CL:0000898,3.63e-13,3;CL:0000763,9.08e-11,108;CL:0000049,9.08e-11,108;CL:0000810,1.77e-10,1;CL:0000895,1.77e-10,1;CL:0002436,1.77e-10,1;CL:0002427,1.77e-10,1;CL:0002428,1.77e-10,1;CL:0002429,1.77e-10,1;CL:0002433,1.77e-10,1;CL:0002431,1.77e-10,1;CL:0002432,1.77e-10,1;CL:0002087,4.52e-08,115;CL:0000624,5.02e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002427;1.05e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.13e-11!102;UBERON:0003061!4.13e-11!102;UBERON:0002371!5.65e-10!80;UBERON:0002193!1.21e-09!112;UBERON:0001474!5.55e-09!86;UBERON:0004765!6.21e-08!101;UBERON:0001434!6.21e-08!101;UBERON:0002384!6.30e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!4.13e-11!102;UBERON:0003061!4.13e-11!102;UBERON:0002371!5.65e-10!80;UBERON:0002193!1.21e-09!112;UBERON:0001474!5.55e-09!86;UBERON:0004765!6.21e-08!101;UBERON:0001434!6.21e-08!101;UBERON:0002384!6.30e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:12592823..12592837,+ | |short_description=p@chr12:12592823..12592837,+ | ||
}} | }} |
Latest revision as of 06:32, 24 July 2015
Short description: | p@chr12:12592823..12592837, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:12592823..12592837, + |
Coexpression cluster: | C167_Basophils_Mast_Eosinophils_Neutrophils_Peripheral_Whole_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 5.09e-59 | 8 |
blood cell | 8.73e-43 | 11 |
basophil | 4.60e-30 | 3 |
eosinophil | 1.14e-20 | 2 |
leukocyte | 8.96e-20 | 136 |
myeloid leukocyte | 5.16e-17 | 72 |
hematopoietic stem cell | 1.64e-15 | 168 |
hematopoietic cell | 1.38e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.43e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.43e-14 | 161 |
neutrophil | 6.12e-14 | 3 |
natural killer cell | 1.32e-13 | 3 |
pro-NK cell | 1.32e-13 | 3 |
naive T cell | 3.63e-13 | 3 |
myeloid cell | 9.08e-11 | 108 |
common myeloid progenitor | 9.08e-11 | 108 |
CD4-positive, alpha-beta thymocyte | 1.77e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.77e-10 | 1 |
mature CD4 single-positive thymocyte | 1.77e-10 | 1 |
resting double-positive thymocyte | 1.77e-10 | 1 |
double-positive blast | 1.77e-10 | 1 |
CD69-positive double-positive thymocyte | 1.77e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.77e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.77e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.77e-10 | 1 |
nongranular leukocyte | 4.52e-08 | 115 |
CD4-positive, alpha-beta T cell | 5.02e-07 | 6 |