FFCP PHASE1:Hg19::chr12:122430653..122430662,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:122430653..122430662,+ | |||
|coexpression_cluster_id=C391 | |||
|description=CAGE_peak_at_chr12:122430653..122430662,+ | |||
|id=chr12:122430653..122430662,+ | |||
|ontology_enrichment_celltype=CL:0002202!3.28e-18!9;CL:0002632!3.28e-18!9;CL:0000068!1.73e-14!3;CL:0000069!1.73e-14!3;CL:0000307!1.73e-14!3;CL:0000377!1.73e-14!3;CL:0002368!1.10e-12!13;CL:0002159!1.24e-12!13;CL:0000362!4.75e-12!8;CL:0000066!3.72e-10!254;CL:0000312!5.07e-09!5;CL:0000622!5.07e-09!5;CL:0002076!5.13e-08!43;CL:0000240!1.17e-07!6;CL:0000311!1.17e-07!6;CL:0000079!1.17e-07!6;CL:0000237!1.17e-07!6;CL:0000154!1.17e-07!6;CL:0000036!1.17e-07!6;CL:0000357!1.17e-07!6;CL:0000114!1.17e-07!6;CL:0002077!1.84e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000317;4.52e-50;2!CL:1000448;4.52e-50;2!CL:0002308;4.52e-50;2!CL:0002140;4.52e-50;2!CL:0000622;5.15e-21;5!CL:0000154;9.07e-18;6!CL:0000150;2.45e-12;9!CL:0000362;2.45e-12;9!CL:0002159;2.00e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,4.52e-50,2;CL:1000448,4.52e-50,2;CL:0002308,4.52e-50,2;CL:0002140,4.52e-50,2;CL:0000622,5.15e-21,5;CL:0000154,9.07e-18,6;CL:0000150,2.45e-12,9;CL:0000362,2.45e-12,9;CL:0002159,2.00e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:6193!3.28e-11!1;DOID:4235!4.01e-11!1;DOID:3908!3.83e-09!5;DOID:1749!5.02e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4556;4.27e-34;3!DOID:3908;4.21e-21;5!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,4.27e-34,3;DOID:3908,4.21e-21,5;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0007196!8.56e-12!14;UBERON:0001558!8.56e-12!14;UBERON:0005178!2.31e-07!34;UBERON:0002224!2.31e-07!34;UBERON:0005181!3.80e-07!35;UBERON:0001003!4.25e-07!14;UBERON:0007376!4.25e-07!14;UBERON:0007383!4.25e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;4.52e-50;2!UBERON:0007771;4.52e-50;2!UBERON:0003297;4.52e-50;2!UBERON:0001821;4.52e-50;2!UBERON:0003487;4.52e-50;2!UBERON:0001820;4.52e-50;2!UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,4.52e-50,2;UBERON:0007771,4.52e-50,2;UBERON:0003297,4.52e-50,2;UBERON:0001821,4.52e-50,2;UBERON:0003487,4.52e-50,2;UBERON:0001820,4.52e-50,2;UBERON:0005089,4.52e-50,2;UBERON:0005088,4.52e-50,2;UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80161211469863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:122430653..122430662,+ | |||
}} |
Latest revision as of 06:03, 24 July 2015
Short description: | p@chr12:122430653..122430662, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122430653..122430662, + |
Coexpression cluster: | C391_large_bronchioalveolar_fibrosarcoma_lung_pancreatic_giant_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 4.52e-50 | 2 |
epithelial cell of sweat gland | 4.52e-50 | 2 |
epithelial cell of skin gland | 4.52e-50 | 2 |
acinar cell of sebaceous gland | 4.52e-50 | 2 |
acinar cell | 5.15e-21 | 5 |
protein secreting cell | 9.07e-18 | 6 |
glandular epithelial cell | 2.45e-12 | 9 |
epidermal cell | 2.45e-12 | 9 |
general ecto-epithelial cell | 2.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
skin gland | 4.52e-50 | 2 |
epidermis gland | 4.52e-50 | 2 |
gland of integumental system | 4.52e-50 | 2 |
sebaceous gland | 4.52e-50 | 2 |
skin sebaceous gland | 4.52e-50 | 2 |
sweat gland | 4.52e-50 | 2 |
sweat gland placode | 4.52e-50 | 2 |
sebaceous gland placode | 4.52e-50 | 2 |
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.27e-34 | 3 |
non-small cell lung carcinoma | 4.21e-21 | 5 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |