FFCP PHASE1:Hg19::chr12:122230932..122230944,-: Difference between revisions
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|id=chr12:122230932..122230944,-
|short_description=p@chr12:122230932..122230944,-
|description=CAGE_peak_at_chr12:122230932..122230944,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:122230932..122230944,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr12:122230932..122230944,- | |||
|id=chr12:122230932..122230944,- | |||
|ontology_enrichment_celltype=CL:0000738!1.54e-26!140;CL:0000988!1.70e-23!182;CL:0000037!2.51e-21!172;CL:0000566!2.51e-21!172;CL:0002032!6.57e-19!165;CL:0000837!6.57e-19!165;CL:0002087!1.03e-15!119;CL:0002031!1.17e-15!124;CL:0000838!8.44e-15!52;CL:0000542!2.22e-14!53;CL:0000051!2.22e-14!53;CL:0000451!7.62e-12!10;CL:0000990!1.61e-11!8;CL:0000080!7.93e-11!6;CL:0000453!1.33e-09!5;CL:0002393!3.83e-09!9;CL:0002397!3.83e-09!9;CL:0000094!1.52e-08!8;CL:0000081!4.65e-08!11;CL:0000084!4.73e-08!25;CL:0000827!4.73e-08!25;CL:0000763!4.00e-07!112;CL:0000049!4.00e-07!112;CL:0000775!7.44e-07!3;CL:0000840!8.99e-07!5;CL:0001029!8.99e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.89e-16;6!CL:0002397;1.89e-16;6!CL:0000081;9.50e-16;11!CL:0000775;3.71e-15;3!CL:0000094;1.13e-12;8!CL:0000453;2.68e-09;5!CL:0000451;4.05e-09;10!CL:0000771;8.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,8.50e-16,11;CL:0000775,3.72e-15,3;CL:0000094,1.13e-12,8;CL:0000988,3.80e-11,177;CL:0002393,4.69e-11,9;CL:0002397,4.69e-11,9;CL:0000738,2.70e-09,136;CL:0000453,2.91e-09,5;CL:0000451,3.63e-09,10;CL:0000037,3.45e-07,168;CL:0000771,8.93e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;8.62e-12;1!DOID:0050177;8.62e-12;1!DOID:0050427;8.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.06e-12,1;DOID:0050177,4.06e-12,1;DOID:0050427,4.06e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.44e-19!15;UBERON:0000179!8.44e-19!15;UBERON:0000463!8.44e-19!15;UBERON:0002390!1.36e-12!102;UBERON:0003061!1.36e-12!102;UBERON:0002193!2.67e-11!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.32e-25;15!UBERON:0000179;9.32e-25;15!UBERON:0000463;9.32e-25;15!UBERON:0002390;1.69e-11;32!UBERON:0002331;4.24e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.36e-25,15;UBERON:0000179,9.36e-25,15;UBERON:0000463,9.36e-25,15;UBERON:0002331,3.31e-10,10;UBERON:0000358,3.31e-10,10;UBERON:0000307,3.31e-10,10;UBERON:0000091,3.31e-10,10;UBERON:0000087,3.31e-10,10;UBERON:0007010,3.31e-10,10;UBERON:0007806,3.31e-10,10;UBERON:0008780,3.31e-10,10;UBERON:0005728,3.31e-10,10;UBERON:0002390,3.53e-09,98;UBERON:0003061,3.53e-09,98;UBERON:0002193,3.30e-08,108 | |||
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| 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| ||
|short_description=p@chr12:122230932..122230944,- | |||
}} | }} |
Latest revision as of 05:59, 24 July 2015
Short description: | p@chr12:122230932..122230944, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122230932..122230944, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 8.50e-16 | 11 |
neutrophil | 3.72e-15 | 3 |
granulocyte | 1.13e-12 | 8 |
hematopoietic cell | 3.80e-11 | 177 |
intermediate monocyte | 4.69e-11 | 9 |
CD14-positive, CD16-positive monocyte | 4.69e-11 | 9 |
leukocyte | 2.70e-09 | 136 |
Langerhans cell | 2.91e-09 | 5 |
dendritic cell | 3.63e-09 | 10 |
hematopoietic stem cell | 3.45e-07 | 168 |
eosinophil | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 9.36e-25 | 15 |
haemolymphatic fluid | 9.36e-25 | 15 |
organism substance | 9.36e-25 | 15 |
umbilical cord | 3.31e-10 | 10 |
blastocyst | 3.31e-10 | 10 |
blastula | 3.31e-10 | 10 |
bilaminar disc | 3.31e-10 | 10 |
inner cell mass | 3.31e-10 | 10 |
cleaving embryo | 3.31e-10 | 10 |
connecting stalk | 3.31e-10 | 10 |
inner cell mass derived epiblast | 3.31e-10 | 10 |
extraembryonic mesoderm | 3.31e-10 | 10 |
hematopoietic system | 3.53e-09 | 98 |
blood island | 3.53e-09 | 98 |
hemolymphoid system | 3.30e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.06e-12 | 1 |
monogenic disease | 4.06e-12 | 1 |
xeroderma pigmentosum | 4.06e-12 | 1 |