FFCP PHASE1:Hg19::chr12:11905439..11905449,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:11905439..11905449,+ | |||
|description=CAGE_peak_at_chr12:11905439..11905449,+ | |description=CAGE_peak_at_chr12:11905439..11905449,+ | ||
|id=chr12:11905439..11905449,+ | |id=chr12:11905439..11905449,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.57e-36!45;CL:0002057!2.56e-35!42;CL:0000557!3.55e-34!71;CL:0000766!8.15e-33!76;CL:0000839!9.63e-33!70;CL:0002009!1.50e-32!65;CL:0002194!8.73e-32!63;CL:0000576!8.73e-32!63;CL:0000040!8.73e-32!63;CL:0000559!8.73e-32!63;CL:0000763!6.33e-27!112;CL:0000049!6.33e-27!112;CL:0000738!2.38e-23!140;CL:0002031!1.16e-20!124;CL:0002032!2.99e-20!165;CL:0000837!2.99e-20!165;CL:0000037!7.95e-20!172;CL:0000566!7.95e-20!172;CL:0000988!1.05e-18!182;CL:0002087!1.23e-18!119 | |ontology_enrichment_celltype=CL:0000860!1.57e-36!45;CL:0002057!2.56e-35!42;CL:0000557!3.55e-34!71;CL:0000766!8.15e-33!76;CL:0000839!9.63e-33!70;CL:0002009!1.50e-32!65;CL:0002194!8.73e-32!63;CL:0000576!8.73e-32!63;CL:0000040!8.73e-32!63;CL:0000559!8.73e-32!63;CL:0000763!6.33e-27!112;CL:0000049!6.33e-27!112;CL:0000738!2.38e-23!140;CL:0002031!1.16e-20!124;CL:0002032!2.99e-20!165;CL:0000837!2.99e-20!165;CL:0000037!7.95e-20!172;CL:0000566!7.95e-20!172;CL:0000988!1.05e-18!182;CL:0002087!1.23e-18!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.06e-35;33!CL:0002057;5.06e-35;33!CL:0000473;1.62e-29;39!CL:0000234;1.62e-29;39!CL:0000785;5.56e-16;1!CL:0000819;5.56e-16;1!CL:0002616;1.92e-15;1!CL:0000576;3.99e-15;48!CL:0000766;2.11e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.28e-28,48;CL:0000234,2.28e-28,48;CL:0000860,2.25e-26,42;CL:0002057,2.25e-26,42;CL:0002194,1.62e-22,59;CL:0000576,1.62e-22,59;CL:0000040,1.62e-22,59;CL:0000559,1.62e-22,59;CL:0000766,2.83e-22,72;CL:0002009,9.27e-22,61;CL:0000839,4.57e-20,66;CL:0000557,9.32e-20,67;CL:0000819,5.56e-16,1;CL:0002616,9.99e-16,1;CL:0000763,1.48e-14,108;CL:0000049,1.48e-14,108;CL:0000738,1.14e-13,136;CL:0002087,1.20e-13,115;CL:0002031,4.90e-13,120;CL:0002032,2.31e-11,161;CL:0000837,2.31e-11,161;CL:0000037,7.74e-11,168;CL:0000988,3.19e-10,177;CL:0000785,1.20e-08,2;CL:0000955,1.20e-08,2;CL:0000818,1.20e-08,2;CL:0000954,1.20e-08,2;CL:0000816,1.20e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.47e-20;42!CL:0000954;1.20e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;5.56e-16;1!DOID:8675;5.56e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.56e-16,1;DOID:8675,5.56e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.64e-30!80;UBERON:0002390!9.71e-29!102;UBERON:0003061!9.71e-29!102;UBERON:0002193!9.24e-28!112;UBERON:0001474!1.74e-27!86;UBERON:0002405!2.04e-25!115;UBERON:0004765!1.60e-21!101;UBERON:0001434!1.60e-21!101;UBERON:0003081!3.54e-12!216;UBERON:0002204!1.20e-11!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;2.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.46e-17,76;UBERON:0001474,5.19e-16,82;UBERON:0004765,1.62e-14,90;UBERON:0002405,5.09e-14,93;UBERON:0002390,2.93e-13,98;UBERON:0003061,2.93e-13,98;UBERON:0001434,5.62e-13,100;UBERON:0002193,6.01e-12,108;UBERON:0005406,1.61e-08,2;UBERON:0002204,2.31e-07,167;UBERON:0003081,3.30e-07,203 | |||
|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.581592955118259,1.51150377475524,0.970336244751265,1.16214518452842,0.411167888021826,2.16794459626573,1.1507695692886,0.768482119587302,1.41889337933151,0.689491361473237,0,1.35426486594342,0.564727018627814,0.272906150057846,0.674170453335254,2.75475503133812,0.320929027076094,0.639337125799041,0.659702600373432,0.598390972864896,2.13112375266347,0.290209238628584,0,0.622822248995575,0.75374599577023,0.521482918420201,1.08594422352558,0,0.736555271975129,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0.492663237895943,0.176096868026452,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.128343036279748,0,0,0,0,0,1.49801404789436,0,0,0,0.500170521059677,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,3.46664099509765,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.0644578879735772,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.581592955118259,1.51150377475524,0.970336244751265,1.16214518452842,0.411167888021826,2.16794459626573,1.1507695692886,0.768482119587302,1.41889337933151,0.689491361473237,0,1.35426486594342,0.564727018627814,0.272906150057846,0.674170453335254,2.75475503133812,0.320929027076094,0.639337125799041,0.659702600373432,0.598390972864896,2.13112375266347,0.290209238628584,0,0.622822248995575,0.75374599577023,0.521482918420201,1.08594422352558,0,0.736555271975129,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0.492663237895943,0.176096868026452,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.128343036279748,0,0,0,0,0,1.49801404789436,0,0,0,0.500170521059677,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,3.46664099509765,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.0644578879735772,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr12:11905439..11905449,+ | |short_description=p@chr12:11905439..11905449,+ | ||
}} | }} |
Latest revision as of 05:35, 24 July 2015
Short description: | p@chr12:11905439..11905449, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:11905439..11905449, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.28e-28 | 48 |
phagocyte | 2.28e-28 | 48 |
classical monocyte | 2.25e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.25e-26 | 42 |
monopoietic cell | 1.62e-22 | 59 |
monocyte | 1.62e-22 | 59 |
monoblast | 1.62e-22 | 59 |
promonocyte | 1.62e-22 | 59 |
myeloid leukocyte | 2.83e-22 | 72 |
macrophage dendritic cell progenitor | 9.27e-22 | 61 |
myeloid lineage restricted progenitor cell | 4.57e-20 | 66 |
granulocyte monocyte progenitor cell | 9.32e-20 | 67 |
B-1 B cell | 5.56e-16 | 1 |
perirenal adipocyte cell | 9.99e-16 | 1 |
myeloid cell | 1.48e-14 | 108 |
common myeloid progenitor | 1.48e-14 | 108 |
leukocyte | 1.14e-13 | 136 |
nongranular leukocyte | 1.20e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 4.90e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.31e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.31e-11 | 161 |
hematopoietic stem cell | 7.74e-11 | 168 |
hematopoietic cell | 3.19e-10 | 177 |
mature B cell | 1.20e-08 | 2 |
pre-B-II cell | 1.20e-08 | 2 |
transitional stage B cell | 1.20e-08 | 2 |
small pre-B-II cell | 1.20e-08 | 2 |
immature B cell | 1.20e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.46e-17 | 76 |
bone element | 5.19e-16 | 82 |
skeletal element | 1.62e-14 | 90 |
immune system | 5.09e-14 | 93 |
hematopoietic system | 2.93e-13 | 98 |
blood island | 2.93e-13 | 98 |
skeletal system | 5.62e-13 | 100 |
hemolymphoid system | 6.01e-12 | 108 |
perirenal fat | 1.61e-08 | 2 |
musculoskeletal system | 2.31e-07 | 167 |
lateral plate mesoderm | 3.30e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.56e-16 | 1 |
lymphosarcoma | 5.56e-16 | 1 |