FFCP PHASE1:Hg19::chr12:116594204..116594208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:116594204..116594208,- | |||
|description=CAGE_peak_at_chr12:116594204..116594208,- | |description=CAGE_peak_at_chr12:116594204..116594208,- | ||
|id=chr12:116594204..116594208,- | |id=chr12:116594204..116594208,- | ||
|ontology_enrichment_celltype=CL:0000037!7.05e-20!172;CL:0000566!7.05e-20!172;CL:0000738!6.95e-19!140;CL:0000988!3.93e-18!182;CL:0002057!1.69e-17!42;CL:0002032!2.49e-17!165;CL:0000837!2.49e-17!165;CL:0002087!2.74e-16!119;CL:0000860!1.91e-15!45;CL:0000763!1.29e-14!112;CL:0000049!1.29e-14!112;CL:0000766!1.67e-14!76;CL:0002031!4.37e-14!124;CL:0002194!1.04e-13!63;CL:0000576!1.04e-13!63;CL:0000040!1.04e-13!63;CL:0000559!1.04e-13!63;CL:0002009!1.20e-13!65;CL:0000839!1.98e-12!70;CL:0000557!2.77e-11!71 | |ontology_enrichment_celltype=CL:0000037!7.05e-20!172;CL:0000566!7.05e-20!172;CL:0000738!6.95e-19!140;CL:0000988!3.93e-18!182;CL:0002057!1.69e-17!42;CL:0002032!2.49e-17!165;CL:0000837!2.49e-17!165;CL:0002087!2.74e-16!119;CL:0000860!1.91e-15!45;CL:0000763!1.29e-14!112;CL:0000049!1.29e-14!112;CL:0000766!1.67e-14!76;CL:0002031!4.37e-14!124;CL:0002194!1.04e-13!63;CL:0000576!1.04e-13!63;CL:0000040!1.04e-13!63;CL:0000559!1.04e-13!63;CL:0002009!1.20e-13!65;CL:0000839!1.98e-12!70;CL:0000557!2.77e-11!71 | ||
|ontology_enrichment_celltype_v019=CL:0002393;8.72e-10;6!CL:0002397;8.72e-10;6!CL:0000576;1.56e-08;48!CL:0000094;2.05e-07;8!CL:0000860;2.38e-07;33!CL:0002057;2.38e-07;33!CL:0000784;3.44e-07;3!CL:0000766;9.38e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.84e-20,136;CL:0000037,1.40e-16,168;CL:0000766,2.39e-16,72;CL:0002087,3.58e-15,115;CL:0000988,4.26e-15,177;CL:0002032,8.22e-15,161;CL:0000837,8.22e-15,161;CL:0000860,2.83e-14,42;CL:0002057,2.83e-14,42;CL:0002031,4.59e-14,120;CL:0002009,5.56e-14,61;CL:0002194,2.80e-13,59;CL:0000576,2.80e-13,59;CL:0000040,2.80e-13,59;CL:0000559,2.80e-13,59;CL:0000557,3.61e-12,67;CL:0000763,5.35e-12,108;CL:0000049,5.35e-12,108;CL:0000473,7.68e-12,48;CL:0000234,7.68e-12,48;CL:0000839,3.04e-11,66;CL:0002393,4.73e-09,9;CL:0002397,4.73e-09,9;CL:0000784,1.78e-07,3;CL:0000094,2.07e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.45e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.65e-13!102;UBERON:0003061!1.65e-13!102;UBERON:0002193!1.81e-10!112;UBERON:0002371!3.02e-09!80;UBERON:0007023!1.61e-08!115;UBERON:0001474!3.05e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.29e-12,98;UBERON:0003061,1.29e-12,98;UBERON:0002193,1.04e-10,108;UBERON:0002371,5.26e-10,76;UBERON:0001474,7.69e-09,82;UBERON:0004765,1.52e-07,90;UBERON:0002405,4.03e-07,93 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0.393364276848904,2.30297638858328,0.928896739896456,0,0,0,0.309868802321207,1.70603078984906,0.587200878669695,8.30993112797816,8.02177789880567,4.34021741431704,0.447830948479849,1.29557466407592,0.257575567634187,0.581592955118259,0.377875943688809,0.727752183563449,0.697287110717054,0.822335776043652,0.929119112685311,0.575384784644301,1.2808035326455,1.6553756092201,1.37898272294647,0.645484683583826,0,0.752969358170419,1.36453075028923,0.224723484445085,0.306083892370903,1.60464513538047,0,0.329851300186716,0.997318288108159,1.70489900213078,0.870627715885752,0.56738522469114,1.86846674698672,0.75374599577023,1.5644487552606,1.73751075764093,0.605399502633369,1.84138817993782,2.53169909952708,0.633765858935825,1.27562579979026,1.46761051855863,1.12328631146495,0.750884464207532,2.08943262706204,0.570025487482497,0.99458338599545,5.66258876670365,0,0,0.889509253863555,2.56038133539904,0,1.14950487990897,0,0,0.569212969109448,1.17447437874188,1.52909291250092,0,1.12101712596307,0,1.180258620683,1.57204305099666,0.822405995998037,0.334372990781356,0.32592226663359,0,0,0.334231370655521,0,0,1.62482318259009,0,2.34106825607781,0.822189523018381,2.21080014228679,0,0.444859689486181,1.87278579662799,3.1360657141493,0.453237370790265,0.383220493601921,0.68725489096526,1.26509846009751,0.318565414324097,0,0,0.602300476311091,0.255973222308837,0,0.236777252044017,0.821127996921047,1.61285394579786,1.06976078313403,1.73789284659359,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.472674085820339,0.443458794925128,0.263504357079378,0.327447688744282,0,0,1.62273696827342,0.696518949197069,0.132957960518865,2.38490624305342,1.71598473234038,1.48583000531826,0,0,1.04142150482278,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.446498641420399,0,0,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0.529636723252875,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0.561803226808994,0.204154171254893,0.61417158655884,0.309977343527296,0,0,0,0,0.673344455816265,0,0,0,0,0.150238058906597,0,0.538168907066586,0.213557388818567,0,0,0.206105058476878,0,0,0.337552664482532,0.0974370051611986,1.00973509697646,0,0.484938170456436,0,0.10075209822764,0,0,0.545492241181669,0,0,0,0.232387885739037,0,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0.984868024349589,0.468008530278475,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0.432359860250884,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.868687840005475,0,0,0,1.18218456121156,1.07813787429759,0.898401253958239,0,0,0,0.167516265334349,0,6.74106321552464,8.97484377612075,0,0.12269149171914,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0.620304078368662,2.15714200818617,0.74709290462411,0,0,0,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0.241718899183244,0.40101294060657,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0.431831832204279,0,0.541892875087706,0,0,0,0,0.657779629937804,0.784306353074702,0,0,0,0.9273691048295,0.183138929636687,0.082509499920588,0,0,1.6068392984416,0,0.462145851343933,0.460511024178389,0.551346289938122,0.644521469209642,0.435050081742686,0,0,0,0,5.35973392477253,0.30347334256665,0,0,0,0,0,0,0,0,0.744316738719335,0,0.38126038784765,0,0.42793898803392,0,0,0.899362287916574,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0,0,0,0.659006605437454,0.43050537267123,0,0,0,1.01489521846434,3.82318603571188,1.70894156152249,1.19115887728894,1.23408681925858,1.29694662238543,0.540031437238115,0.79312517629427,0.106824071127473,0,0.490080431962063,0.743212700502875,0,0.711418433484141,0.318852545457645,0.997896857164083,0.383010740264733,0.423347165447766,0,0.561594356226918,0.912938716132769,0.156679895773023,0,0,0.642352300414798,0.403599414382095,1.70338495076131,1.37402137902306,0,0,0.166849141711909,0.586164286206121,0,1.23087398947712,0.540911356951966,0.66614393599564,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0.852408440419239,0,0,0,0,0.562677665642051,0,0.494411622680279,0.211125408127993,0.597743964753209,1.10513566212459,0.251932747854276,0,0,0,0.0898683511473268,0.179021174675609,0.511572370226872,0.295930216910801,0,0,0,0.0927680981618513,1.99613798001194,1.04171104434093,0,0,0.227586896570999,0,0,0,0.874813840149763,0.173624994933292,0,0.60298219312704,0,0.774054819518572,1.18219047581419,0.658156191461918,0,0.139423744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| ||
|short_description=p@chr12:116594204..116594208,- | |short_description=p@chr12:116594204..116594208,- | ||
}} | }} |
Latest revision as of 05:22, 24 July 2015
Short description: | p@chr12:116594204..116594208, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:116594204..116594208, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.84e-20 | 136 |
hematopoietic stem cell | 1.40e-16 | 168 |
myeloid leukocyte | 2.39e-16 | 72 |
nongranular leukocyte | 3.58e-15 | 115 |
hematopoietic cell | 4.26e-15 | 177 |
hematopoietic oligopotent progenitor cell | 8.22e-15 | 161 |
hematopoietic multipotent progenitor cell | 8.22e-15 | 161 |
classical monocyte | 2.83e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.83e-14 | 42 |
hematopoietic lineage restricted progenitor cell | 4.59e-14 | 120 |
macrophage dendritic cell progenitor | 5.56e-14 | 61 |
monopoietic cell | 2.80e-13 | 59 |
monocyte | 2.80e-13 | 59 |
monoblast | 2.80e-13 | 59 |
promonocyte | 2.80e-13 | 59 |
granulocyte monocyte progenitor cell | 3.61e-12 | 67 |
myeloid cell | 5.35e-12 | 108 |
common myeloid progenitor | 5.35e-12 | 108 |
defensive cell | 7.68e-12 | 48 |
phagocyte | 7.68e-12 | 48 |
myeloid lineage restricted progenitor cell | 3.04e-11 | 66 |
intermediate monocyte | 4.73e-09 | 9 |
CD14-positive, CD16-positive monocyte | 4.73e-09 | 9 |
plasmacytoid dendritic cell | 1.78e-07 | 3 |
granulocyte | 2.07e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.29e-12 | 98 |
blood island | 1.29e-12 | 98 |
hemolymphoid system | 1.04e-10 | 108 |
bone marrow | 5.26e-10 | 76 |
bone element | 7.69e-09 | 82 |
skeletal element | 1.52e-07 | 90 |
immune system | 4.03e-07 | 93 |