FFCP PHASE1:Hg19::chr12:113644361..113644365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:113644361..113644365,+ | |||
|description=CAGE_peak_at_chr12:113644361..113644365,+ | |description=CAGE_peak_at_chr12:113644361..113644365,+ | ||
|id=chr12:113644361..113644365,+ | |id=chr12:113644361..113644365,+ | ||
|ontology_enrichment_celltype=CL:0002150!2.12e-11!3;CL:0000861!2.12e-11!3;CL:0000223!7.26e-11!59;CL:0000064!9.18e-11!3;CL:0005012!9.18e-11!3;CL:0000067!9.18e-11!3;CL:0002304!9.18e-11!3;CL:0000066!2.33e-10!254;CL:0000181!7.49e-08!12;CL:0000417!7.49e-08!12;CL:0000668!7.49e-08!12;CL:0000414!7.49e-08!12;CL:0000412!7.49e-08!12;CL:0000182!7.49e-08!12;CL:0002368!4.62e-07!13;CL:0002202!5.69e-07!9;CL:0002632!5.69e-07!9;CL:0002076!8.91e-07!43 | |ontology_enrichment_celltype=CL:0002150!2.12e-11!3;CL:0000861!2.12e-11!3;CL:0000223!7.26e-11!59;CL:0000064!9.18e-11!3;CL:0005012!9.18e-11!3;CL:0000067!9.18e-11!3;CL:0002304!9.18e-11!3;CL:0000066!2.33e-10!254;CL:0000181!7.49e-08!12;CL:0000417!7.49e-08!12;CL:0000668!7.49e-08!12;CL:0000414!7.49e-08!12;CL:0000412!7.49e-08!12;CL:0000182!7.49e-08!12;CL:0002368!4.62e-07!13;CL:0002202!5.69e-07!9;CL:0002632!5.69e-07!9;CL:0002076!8.91e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002149;3.11e-27;6!CL:0002255;3.11e-27;6!CL:0000322;1.22e-14;3!CL:0000182;3.36e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.38e-27,6;CL:0002255,2.38e-27,6;CL:0000223,1.12e-17,58;CL:0000322,1.22e-14,3;CL:0000182,3.84e-14,12;CL:0002076,2.45e-09,42 | |||
|ontology_enrichment_development_v019=UBERON:0005795;8.13e-17;10!CL:0000223;5.10e-11;58 | |||
|ontology_enrichment_disease=DOID:305!1.78e-13!106;DOID:0050687!2.02e-09!143;DOID:5093!1.38e-08!4;DOID:1612!1.38e-08!4;DOID:3908!4.27e-07!5 | |ontology_enrichment_disease=DOID:305!1.78e-13!106;DOID:0050687!2.02e-09!143;DOID:5093!1.38e-08!4;DOID:1612!1.38e-08!4;DOID:3908!4.27e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:3001;3.11e-27;6!DOID:3910;3.11e-21;2!DOID:3908;2.53e-09;5!DOID:299;2.43e-07;25!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7!DOID:120;7.24e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.38e-27,6;DOID:3910,3.11e-21,2;DOID:3908,2.53e-09,5;DOID:299,2.28e-07,25;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7;DOID:120,6.82e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0008947!5.34e-11!38;UBERON:0003258!5.34e-11!38;UBERON:0001778!9.18e-11!3;UBERON:0001775!9.18e-11!3;UBERON:0000072!3.87e-10!46;UBERON:0000065!6.33e-10!53;UBERON:0001737!1.63e-09!9;UBERON:0000488!3.50e-08!4;UBERON:0001004!1.18e-07!72;UBERON:0001041!1.26e-07!98;UBERON:0000063!2.28e-07!97 | |ontology_enrichment_uberon=UBERON:0008947!5.34e-11!38;UBERON:0003258!5.34e-11!38;UBERON:0001778!9.18e-11!3;UBERON:0001775!9.18e-11!3;UBERON:0000072!3.87e-10!46;UBERON:0000065!6.33e-10!53;UBERON:0001737!1.63e-09!9;UBERON:0000488!3.50e-08!4;UBERON:0001004!1.18e-07!72;UBERON:0001041!1.26e-07!98;UBERON:0000063!2.28e-07!97 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.11e-21;2!UBERON:0002173;3.11e-21;2!UBERON:0002186;3.11e-21;2!UBERON:0004821;1.22e-14;3!UBERON:0007499;1.22e-14;3!UBERON:0003215;1.22e-14;3!UBERON:0010368;1.22e-14;3!UBERON:0009911;1.22e-14;3!UBERON:0002299;1.22e-14;3!UBERON:0006524;1.22e-14;3!UBERON:0008874;1.22e-14;3!UBERON:0002169;1.22e-14;3!UBERON:0004894;1.22e-14;3!UBERON:0009856;2.53e-11;4!UBERON:0000995;2.46e-10;17!UBERON:0003975;8.11e-10;18!UBERON:0002107;2.36e-09;19!UBERON:0006925;2.36e-09;19!UBERON:0004175;1.48e-08;21!UBERON:0002423;2.43e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.11e-21,2;UBERON:0002173,3.11e-21,2;UBERON:0002186,3.11e-21,2;UBERON:0007499,4.84e-15,25;UBERON:0004821,1.22e-14,3;UBERON:0003215,1.22e-14,3;UBERON:0010368,1.22e-14,3;UBERON:0009911,1.22e-14,3;UBERON:0002299,1.22e-14,3;UBERON:0006524,1.22e-14,3;UBERON:0008874,1.22e-14,3;UBERON:0002169,1.22e-14,3;UBERON:0004894,1.22e-14,3;UBERON:0009856,1.70e-14,26;UBERON:0002107,2.56e-09,19;UBERON:0006925,2.56e-09,19;UBERON:0008836,2.56e-09,19;UBERON:0000995,1.37e-08,21;UBERON:0005795,3.04e-08,22;UBERON:0003975,3.04e-08,22;UBERON:0008835,3.51e-08,22;UBERON:0003894,3.51e-08,22;UBERON:0009854,7.23e-08,23;UBERON:0004175,2.28e-07,25;UBERON:0009497,2.58e-07,25;UBERON:0000015,2.58e-07,25;UBERON:0002423,2.58e-07,25;UBERON:0006235,2.58e-07,25;UBERON:0004161,2.58e-07,25 | |||
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| ||
|short_description=p@chr12:113644361..113644365,+ | |short_description=p@chr12:113644361..113644365,+ | ||
}} | }} |
Latest revision as of 05:11, 24 July 2015
Short description: | p@chr12:113644361..113644365, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:113644361..113644365, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.38e-27 | 6 |
stromal cell of endometrium | 2.38e-27 | 6 |
endodermal cell | 1.12e-17 | 58 |
pneumocyte | 1.22e-14 | 3 |
hepatocyte | 3.84e-14 | 12 |
endo-epithelial cell | 2.45e-09 | 42 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.11e-21 | 2 |
alveolar duct | 3.11e-21 | 2 |
bronchiole | 3.11e-21 | 2 |
epithelial sac | 4.84e-15 | 25 |
pulmonary alveolus epithelium | 1.22e-14 | 3 |
alveolus | 1.22e-14 | 3 |
pulmonary lobule | 1.22e-14 | 3 |
lobule | 1.22e-14 | 3 |
alveolus of lung | 1.22e-14 | 3 |
alveolar system | 1.22e-14 | 3 |
pulmonary acinus | 1.22e-14 | 3 |
alveolar sac | 1.22e-14 | 3 |
alveolar wall | 1.22e-14 | 3 |
sac | 1.70e-14 | 26 |
liver | 2.56e-09 | 19 |
digestive gland | 2.56e-09 | 19 |
liver bud | 2.56e-09 | 19 |
uterus | 1.37e-08 | 21 |
embryonic uterus | 3.04e-08 | 22 |
internal female genitalia | 3.04e-08 | 22 |
hepatic diverticulum | 3.51e-08 | 22 |
liver primordium | 3.51e-08 | 22 |
digestive tract diverticulum | 7.23e-08 | 23 |
internal genitalia | 2.28e-07 | 25 |
epithelium of foregut-midgut junction | 2.58e-07 | 25 |
anatomical boundary | 2.58e-07 | 25 |
hepatobiliary system | 2.58e-07 | 25 |
foregut-midgut junction | 2.58e-07 | 25 |
septum transversum | 2.58e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.38e-27 | 6 |
lung adenocarcinoma | 3.11e-21 | 2 |
non-small cell lung carcinoma | 2.53e-09 | 5 |
adenocarcinoma | 2.28e-07 | 25 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |
female reproductive organ cancer | 6.82e-07 | 27 |