FFCP PHASE1:Hg19::chr12:109025991..109025997,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:109025991..109025997,+ to FFCP PHASE1:Hg19::chr12:109025991..109025997,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:109025991..109025997,+ | |||
|coexpression_cluster_id=C1656 | |||
|description=CAGE_peak_at_chr12:109025991..109025997,+ | |||
|id=chr12:109025991..109025997,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.17e-78!140;CL:0000037!1.08e-64!172;CL:0000566!1.08e-64!172;CL:0002032!9.45e-62!165;CL:0000837!9.45e-62!165;CL:0002031!5.97e-61!124;CL:0000988!1.61e-59!182;CL:0002087!3.95e-57!119;CL:0000766!7.78e-43!76;CL:0000860!7.36e-38!45;CL:0000557!2.30e-37!71;CL:0002057!2.59e-37!42;CL:0000763!2.82e-35!112;CL:0000049!2.82e-35!112;CL:0000839!1.13e-32!70;CL:0002009!8.86e-31!65;CL:0002194!9.71e-29!63;CL:0000576!9.71e-29!63;CL:0000040!9.71e-29!63;CL:0000559!9.71e-29!63;CL:0000838!6.54e-24!52;CL:0000542!2.97e-23!53;CL:0000051!2.97e-23!53;CL:0000084!2.20e-19!25;CL:0000827!2.20e-19!25;CL:0000791!6.21e-19!18;CL:0000789!6.21e-19!18;CL:0002420!6.21e-19!18;CL:0002419!6.21e-19!18;CL:0000790!6.21e-19!18;CL:0000134!2.46e-16!358;CL:0002320!1.63e-15!365;CL:0002393!3.42e-15!9;CL:0002397!3.42e-15!9;CL:0000219!1.17e-12!390;CL:0000094!7.96e-11!8;CL:0000625!2.84e-10!11;CL:0000048!9.38e-10!430;CL:0000624!1.22e-09!6;CL:0000723!2.77e-09!436;CL:0000034!3.68e-09!444;CL:0002274!1.69e-07!5;CL:0000457!1.69e-07!5;CL:0002191!1.69e-07!5;CL:0000097!1.69e-07!5;CL:0000831!1.69e-07!5;CL:0002028!1.69e-07!5;CL:0000081!2.03e-07!11;CL:0000453!2.41e-07!5;CL:0000451!4.96e-07!10;CL:0000990!6.97e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;8.51e-21;8!CL:0002393;9.51e-20;6!CL:0002397;9.51e-20;6!CL:0000766;1.87e-17;69!CL:0000576;1.85e-16;48!CL:0000081;8.34e-15;11!CL:0000860;3.23e-12;33!CL:0002057;3.23e-12;33!CL:0000875;2.35e-11;3!CL:0002396;2.35e-11;3!CL:0000623;2.43e-11;3!CL:0000767;3.96e-11;3!CL:0000791;2.14e-10;18!CL:0000789;2.14e-10;18!CL:0002419;2.14e-10;18!CL:0002087;9.37e-10;104!CL:0000473;1.62e-09;39!CL:0000234;1.62e-09;39!CL:0000084;6.74e-09;25!CL:0000624;1.22e-08;6!CL:0000771;4.47e-08;2!CL:0000738;6.13e-08;136!CL:0000763;3.08e-07;100!CL:0000988;7.58e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.60e-46,136;CL:0000037,9.34e-37,168;CL:0002032,2.61e-35,161;CL:0000837,2.61e-35,161;CL:0000766,3.84e-35,72;CL:0000988,2.72e-34,177;CL:0002087,1.30e-32,115;CL:0000860,2.02e-31,42;CL:0002057,2.02e-31,42;CL:0002031,5.48e-31,120;CL:0002393,3.68e-29,9;CL:0002397,3.68e-29,9;CL:0000473,9.35e-27,48;CL:0000234,9.35e-27,48;CL:0000763,5.17e-24,108;CL:0000049,5.17e-24,108;CL:0000557,6.58e-23,67;CL:0000839,2.37e-21,66;CL:0000094,8.48e-21,8;CL:0002194,3.06e-20,59;CL:0000576,3.06e-20,59;CL:0000040,3.06e-20,59;CL:0000559,3.06e-20,59;CL:0002009,2.11e-19,61;CL:0000081,8.32e-15,11;CL:0000875,2.57e-11,3;CL:0002396,2.57e-11,3;CL:0000623,2.66e-11,3;CL:0000825,2.66e-11,3;CL:0000134,2.69e-11,354;CL:0000767,3.72e-11,3;CL:0002320,7.45e-11,361;CL:0000791,1.16e-10,18;CL:0000789,1.16e-10,18;CL:0002420,1.16e-10,18;CL:0002419,1.16e-10,18;CL:0000790,1.16e-10,18;CL:0000838,1.35e-10,52;CL:0000542,2.49e-10,53;CL:0000051,2.49e-10,53;CL:0000219,2.65e-09,386;CL:0000084,4.59e-09,25;CL:0000827,4.59e-09,25;CL:0000624,6.73e-09,6;CL:0000771,4.26e-08,2;CL:0000048,2.02e-07,427;CL:0000034,2.23e-07,441;CL:0000723,3.65e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.35e-23;42!CL:0000790;2.14e-10;18!CL:0000049;6.71e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.79e-43!102;UBERON:0003061!2.79e-43!102;UBERON:0002193!5.96e-39!112;UBERON:0002371!3.82e-33!80;UBERON:0001474!9.82e-30!86;UBERON:0004765!5.00e-23!101;UBERON:0001434!5.00e-23!101;UBERON:0002405!1.83e-22!115;UBERON:0002384!2.12e-14!375;UBERON:0003081!8.15e-12!216;UBERON:0000178!1.93e-10!15;UBERON:0000179!1.93e-10!15;UBERON:0000463!1.93e-10!15;UBERON:0002204!5.53e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.25e-09;15!UBERON:0000179;3.25e-09;15!UBERON:0000463;3.25e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.21e-28,98;UBERON:0003061,2.21e-28,98;UBERON:0002193,5.71e-25,108;UBERON:0002371,2.78e-21,76;UBERON:0001474,2.97e-19,82;UBERON:0002405,8.63e-18,93;UBERON:0004765,5.69e-17,90;UBERON:0001434,1.23e-14,100;UBERON:0002384,2.98e-10,371;UBERON:0003081,1.93e-09,203;UBERON:0000178,3.51e-09,15;UBERON:0000179,3.51e-09,15;UBERON:0000463,3.51e-09,15 | |||
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|short_description=p@chr12:109025991..109025997,+ | |||
}} | }} |
Latest revision as of 04:39, 24 July 2015
Short description: | p@chr12:109025991..109025997, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109025991..109025997, + |
Coexpression cluster: | C1656_CD14CD16_CD14_CD4_Basophils_CD8_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.21e-28 | 98 |
blood island | 2.21e-28 | 98 |
hemolymphoid system | 5.71e-25 | 108 |
bone marrow | 2.78e-21 | 76 |
bone element | 2.97e-19 | 82 |
immune system | 8.63e-18 | 93 |
skeletal element | 5.69e-17 | 90 |
skeletal system | 1.23e-14 | 100 |
connective tissue | 2.98e-10 | 371 |
lateral plate mesoderm | 1.93e-09 | 203 |
blood | 3.51e-09 | 15 |
haemolymphatic fluid | 3.51e-09 | 15 |
organism substance | 3.51e-09 | 15 |