FFCP PHASE1:Hg19::chr12:107130979..107130983,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:107130979..107130983,+ | |||
|description=CAGE_peak_at_chr12:107130979..107130983,+ | |description=CAGE_peak_at_chr12:107130979..107130983,+ | ||
|id=chr12:107130979..107130983,+ | |id=chr12:107130979..107130983,+ | ||
|ontology_enrichment_celltype=CL:0001014!9.82e-08!2;CL:0001016!9.82e-08!2 | |ontology_enrichment_celltype=CL:0001014!9.82e-08!2;CL:0001016!9.82e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.42e-11;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.03e-17;3!UBERON:0003057;1.03e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;8.10e-26;2!DOID:962;8.10e-26;2!DOID:1192;1.03e-17;3!DOID:169;1.50e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,9.18e-26,2;DOID:962,9.18e-26,2;DOID:1192,1.12e-17,3;DOID:169,1.57e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.01e-28!57;UBERON:0005068!1.01e-28!57;UBERON:0006241!1.01e-28!57;UBERON:0007135!1.01e-28!57;UBERON:0001017!3.65e-23!82;UBERON:0002780!8.86e-23!41;UBERON:0001890!8.86e-23!41;UBERON:0006240!8.86e-23!41;UBERON:0003080!3.90e-22!42;UBERON:0005743!8.86e-22!86;UBERON:0000073!7.39e-21!94;UBERON:0001016!7.39e-21!94;UBERON:0002616!1.75e-20!59;UBERON:0002791!3.06e-20!33;UBERON:0002020!1.45e-19!34;UBERON:0003528!1.45e-19!34;UBERON:0001893!1.51e-19!34;UBERON:0002346!4.45e-19!90;UBERON:0003075!1.38e-18!86;UBERON:0007284!1.38e-18!86;UBERON:0000955!3.75e-18!69;UBERON:0006238!3.75e-18!69;UBERON:0001869!1.07e-15!32;UBERON:0000956!3.04e-15!25;UBERON:0000203!3.04e-15!25;UBERON:0007023!7.08e-15!115;UBERON:0002619!8.79e-15!22;UBERON:0003056!6.89e-14!61;UBERON:0001950!2.40e-13!20;UBERON:0002240!4.64e-11!3;UBERON:0000924!8.31e-11!173;UBERON:0006601!8.31e-11!173;UBERON:0004121!2.56e-10!169;UBERON:0001871!6.18e-10!7;UBERON:0000033!9.46e-10!123;UBERON:0000153!4.90e-09!129;UBERON:0007811!4.90e-09!129;UBERON:0003076!9.72e-08!15;UBERON:0003057!9.72e-08!15;UBERON:0002298!4.98e-07!8;UBERON:0000025!7.56e-07!194;UBERON:0005174!8.93e-07!5;UBERON:0001137!8.93e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;8.10e-26;2!UBERON:0002240;1.03e-17;3!UBERON:0005174;1.03e-17;3!UBERON:0001137;1.03e-17;3!UBERON:0000013;3.42e-11;5!UBERON:0002410;3.42e-11;5!UBERON:0001871;1.89e-08;6!UBERON:0000922;2.91e-08;49!UBERON:0000010;8.61e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,9.18e-26,2;UBERON:0002240,9.46e-18,3;UBERON:0005174,9.46e-18,3;UBERON:0001137,9.46e-18,3;UBERON:0000013,3.60e-11,5;UBERON:0002410,3.60e-11,5;UBERON:0001871,1.89e-08,6;UBERON:0000010,8.85e-07,8 | |||
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| ||
|short_description=p@chr12:107130979..107130983,+ | |short_description=p@chr12:107130979..107130983,+ | ||
}} | }} |
Latest revision as of 04:29, 24 July 2015
Short description: | p@chr12:107130979..107130983, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:107130979..107130983, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 9.18e-26 | 2 |
spinal cord | 9.46e-18 | 3 |
dorsal region element | 9.46e-18 | 3 |
dorsum | 9.46e-18 | 3 |
sympathetic nervous system | 3.60e-11 | 5 |
autonomic nervous system | 3.60e-11 | 5 |
temporal lobe | 1.89e-08 | 6 |
peripheral nervous system | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 9.18e-26 | 2 |
neurofibroma | 9.18e-26 | 2 |
peripheral nervous system neoplasm | 1.12e-17 | 3 |
neuroendocrine tumor | 1.57e-09 | 6 |