FFCP PHASE1:Hg19::chr12:103353295..103353316,-: Difference between revisions
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|id=chr12:103353295..103353316,-
|short_description=p@chr12:103353295..103353316,-
|description=CAGE_peak_at_chr12:103353295..103353316,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:103353295..103353316,- | |||
|coexpression_cluster_id=C740 | |||
|description=CAGE_peak_at_chr12:103353295..103353316,- | |||
|id=chr12:103353295..103353316,- | |||
|ontology_enrichment_celltype=CL:0000047!8.94e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000167;6.23e-18;1!CL:0000164;6.23e-18;1!CL:0000502;6.23e-18;1!CL:0000172;6.23e-18;1!CL:0000173;6.23e-18;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,6.23e-18,1;CL:0000164,6.23e-18,1;CL:0000502,6.23e-18,1;CL:0000172,6.23e-18,1;CL:0000173,6.23e-18,1;CL:0002351,6.23e-18,1 | |||
|ontology_enrichment_development_v019=CL:0002351;6.23e-18;1 | |||
|ontology_enrichment_disease=DOID:169!4.83e-09!6 | |||
|ontology_enrichment_disease_v019=DOID:4430;6.23e-18;1!DOID:169;4.55e-12;6!DOID:171;1.33e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,6.23e-18,1;DOID:169,4.55e-12,6;DOID:171,1.33e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.94e-19!94;UBERON:0001016!3.94e-19!94;UBERON:0001017!7.33e-18!82;UBERON:0005743!9.56e-17!86;UBERON:0001049!1.09e-15!57;UBERON:0005068!1.09e-15!57;UBERON:0006241!1.09e-15!57;UBERON:0007135!1.09e-15!57;UBERON:0000955!7.08e-12!69;UBERON:0006238!7.08e-12!69;UBERON:0002616!1.07e-11!59;UBERON:0003075!3.41e-11!86;UBERON:0007284!3.41e-11!86;UBERON:0007023!4.83e-11!115;UBERON:0002780!1.00e-10!41;UBERON:0001890!1.00e-10!41;UBERON:0006240!1.00e-10!41;UBERON:0002346!1.80e-10!90;UBERON:0003080!2.10e-10!42;UBERON:0004121!3.73e-10!169;UBERON:0000924!9.41e-10!173;UBERON:0006601!9.41e-10!173;UBERON:0001893!6.39e-08!34;UBERON:0000200!8.58e-08!6;UBERON:0000007!2.22e-07!2;UBERON:0003056!2.39e-07!61;UBERON:0000153!3.49e-07!129;UBERON:0007811!3.49e-07!129;UBERON:0002619!5.18e-07!22;UBERON:0001869!5.96e-07!32;UBERON:0003076!7.92e-07!15;UBERON:0003057!7.92e-07!15;UBERON:0002791!8.61e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.40e-15;10!UBERON:0000178;1.91e-10;15!UBERON:0000179;1.91e-10;15!UBERON:0000463;1.91e-10;15!UBERON:0000478;9.79e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.34e-15,10;UBERON:0000358,2.34e-15,10;UBERON:0000307,2.34e-15,10;UBERON:0000091,2.34e-15,10;UBERON:0000087,2.34e-15,10;UBERON:0007010,2.34e-15,10;UBERON:0007806,2.34e-15,10;UBERON:0008780,2.34e-15,10;UBERON:0005728,2.34e-15,10;UBERON:0000178,1.88e-10,15;UBERON:0000179,1.88e-10,15;UBERON:0000463,1.88e-10,15;UBERON:0000478,9.69e-07,24 | |||
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| ||
|short_description=p@chr12:103353295..103353316,- | |||
}} | }} |
Latest revision as of 04:11, 24 July 2015
Short description: | p@chr12:103353295..103353316, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:103353295..103353316, - |
Coexpression cluster: | C740_gastrointestinal_smallcell_small_nonsmall_neuroblastoma_temporal_somatostatinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 6.23e-18 | 1 |
enteroendocrine cell | 6.23e-18 | 1 |
type D enteroendocrine cell | 6.23e-18 | 1 |
somatostatin secreting cell | 6.23e-18 | 1 |
pancreatic D cell | 6.23e-18 | 1 |
progenitor cell of endocrine pancreas | 6.23e-18 | 1 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.34e-15 | 10 |
blastocyst | 2.34e-15 | 10 |
blastula | 2.34e-15 | 10 |
bilaminar disc | 2.34e-15 | 10 |
inner cell mass | 2.34e-15 | 10 |
cleaving embryo | 2.34e-15 | 10 |
connecting stalk | 2.34e-15 | 10 |
inner cell mass derived epiblast | 2.34e-15 | 10 |
extraembryonic mesoderm | 2.34e-15 | 10 |
blood | 1.88e-10 | 15 |
haemolymphatic fluid | 1.88e-10 | 15 |
organism substance | 1.88e-10 | 15 |
extraembryonic structure | 9.69e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.23e-18 | 1 |
neuroendocrine tumor | 4.55e-12 | 6 |
neuroectodermal tumor | 1.33e-07 | 10 |