FFCP PHASE1:Hg19::chr11:89114727..89114730,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:89114727..89114730,+ | |||
|coexpression_cluster_id=C165 | |coexpression_cluster_id=C165 | ||
|description=CAGE_peak_at_chr11:89114727..89114730,+ | |description=CAGE_peak_at_chr11:89114727..89114730,+ | ||
|id=chr11:89114727..89114730,+ | |id=chr11:89114727..89114730,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.41e-30!24;CL:0000115!2.96e-27!35;CL:0002078!1.41e-21!44;CL:0000071!4.26e-21!18;CL:0002546!4.26e-21!18;CL:0000213!7.37e-21!57;CL:0000215!7.37e-21!57;CL:0000319!8.86e-17!1;CL:0000222!6.82e-12!119;CL:0005020!3.06e-11!6;CL:0002138!3.06e-11!6;CL:0005022!3.06e-11!6;CL:0002543!5.93e-11!6;CL:0002262!3.71e-09!2;CL:1000398!3.71e-09!2;CL:0000159!4.70e-09!2;CL:0000076!1.42e-08!62;CL:1000413!8.03e-08!9 | |ontology_enrichment_celltype=CL:0002139!1.41e-30!24;CL:0000115!2.96e-27!35;CL:0002078!1.41e-21!44;CL:0000071!4.26e-21!18;CL:0002546!4.26e-21!18;CL:0000213!7.37e-21!57;CL:0000215!7.37e-21!57;CL:0000319!8.86e-17!1;CL:0000222!6.82e-12!119;CL:0005020!3.06e-11!6;CL:0002138!3.06e-11!6;CL:0005022!3.06e-11!6;CL:0002543!5.93e-11!6;CL:0002262!3.71e-09!2;CL:1000398!3.71e-09!2;CL:0000159!4.70e-09!2;CL:0000076!1.42e-08!62;CL:1000413!8.03e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002262;4.52e-50;2!CL:1000398;4.52e-50;2!CL:0000182;1.33e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,4.52e-50,2;CL:1000398,4.52e-50,2;CL:0000182,1.33e-09,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:6193!4.72e-17!1;DOID:3030!8.86e-17!1;DOID:3350!3.43e-09!2 | |ontology_enrichment_disease=DOID:6193!4.72e-17!1;DOID:3030!8.86e-17!1;DOID:3350!3.43e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:6193;9.37e-99;1!DOID:3350;2.74e-50;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,9.37e-99,1;DOID:3350,2.74e-50,2 | |||
|ontology_enrichment_uberon=UBERON:0001986!4.26e-21!18;UBERON:0004638!4.26e-21!18;UBERON:0004852!4.26e-21!18;UBERON:0000487!2.77e-17!22;UBERON:0000055!3.84e-17!69;UBERON:0006914!3.21e-15!25;UBERON:0002049!7.08e-15!79;UBERON:0007798!7.08e-15!79;UBERON:0001981!5.10e-12!60;UBERON:0007500!5.10e-12!60;UBERON:0004537!5.10e-12!60;UBERON:0006965!5.10e-12!60;UBERON:0004535!1.86e-10!110;UBERON:0001009!3.72e-10!113;UBERON:0001473!1.17e-08!8;UBERON:0004536!1.17e-08!8;UBERON:0006558!1.17e-08!8;UBERON:0004872!1.90e-08!84;UBERON:0003915!8.03e-08!9;UBERON:0004700!8.03e-08!9;UBERON:0001917!8.03e-08!9;UBERON:0001638!1.33e-07!9;UBERON:0003920!1.33e-07!9;UBERON:0004582!1.33e-07!9;UBERON:0002465!4.26e-07!10 | |ontology_enrichment_uberon=UBERON:0001986!4.26e-21!18;UBERON:0004638!4.26e-21!18;UBERON:0004852!4.26e-21!18;UBERON:0000487!2.77e-17!22;UBERON:0000055!3.84e-17!69;UBERON:0006914!3.21e-15!25;UBERON:0002049!7.08e-15!79;UBERON:0007798!7.08e-15!79;UBERON:0001981!5.10e-12!60;UBERON:0007500!5.10e-12!60;UBERON:0004537!5.10e-12!60;UBERON:0006965!5.10e-12!60;UBERON:0004535!1.86e-10!110;UBERON:0001009!3.72e-10!113;UBERON:0001473!1.17e-08!8;UBERON:0004536!1.17e-08!8;UBERON:0006558!1.17e-08!8;UBERON:0004872!1.90e-08!84;UBERON:0003915!8.03e-08!9;UBERON:0004700!8.03e-08!9;UBERON:0001917!8.03e-08!9;UBERON:0001638!1.33e-07!9;UBERON:0003920!1.33e-07!9;UBERON:0004582!1.33e-07!9;UBERON:0002465!4.26e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;4.52e-50;2!UBERON:0003497;4.52e-50;2!UBERON:0003909;4.52e-50;2!UBERON:0003835;4.52e-50;2!UBERON:0001280;5.96e-34;3!UBERON:0004647;5.96e-34;3!UBERON:0003513;1.91e-15;7!UBERON:0000353;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,4.52e-50,2;UBERON:0003497,4.52e-50,2;UBERON:0003909,4.52e-50,2;UBERON:0003835,4.52e-50,2;UBERON:0001280,5.96e-34,3;UBERON:0004647,5.96e-34,3;UBERON:0005171,5.96e-34,3;UBERON:0002394,9.07e-18,6;UBERON:0003928,9.07e-18,6;UBERON:0003513,1.91e-15,7;UBERON:0002294,2.45e-12,9;UBERON:0001173,2.45e-12,9;UBERON:0004912,2.45e-12,9;UBERON:0000353,5.93e-08,15 | |||
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|short_description=p@chr11:89114727..89114730,+ | |short_description=p@chr11:89114727..89114730,+ | ||
}} | }} |
Latest revision as of 03:24, 24 July 2015
Short description: | p@chr11:89114727..89114730, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:89114727..89114730, + |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 4.52e-50 | 2 |
endothelial cell of hepatic sinusoid | 4.52e-50 | 2 |
hepatocyte | 1.33e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 4.52e-50 | 2 |
abdomen blood vessel | 4.52e-50 | 2 |
sinusoid | 4.52e-50 | 2 |
abdominal segment blood vessel | 4.52e-50 | 2 |
liver parenchyma | 5.96e-34 | 3 |
liver lobule | 5.96e-34 | 3 |
hepatic duct | 5.96e-34 | 3 |
bile duct | 9.07e-18 | 6 |
digestive system duct | 9.07e-18 | 6 |
trunk blood vessel | 1.91e-15 | 7 |
biliary system | 2.45e-12 | 9 |
biliary tree | 2.45e-12 | 9 |
biliary bud | 2.45e-12 | 9 |
parenchyma | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 9.37e-99 | 1 |
mesenchymal cell neoplasm | 2.74e-50 | 2 |