FFCP PHASE1:Hg19::chr11:8680082..8680102,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr11:8680082..8680102,- to FFCP PHASE1:Hg19::chr11:8680082..8680102,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:8680082..8680102,- | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_at_chr11:8680082..8680102,- | |||
|id=chr11:8680082..8680102,- | |||
|ontology_enrichment_celltype=CL:0002579!7.14e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.70e-43;5!CL:0002579;1.94e-18;3!CL:0002321;9.31e-15;15!CL:0002334;1.91e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,2.32e-18,3;CL:0002334,2.18e-10,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!5.02e-14!10;DOID:3095!3.62e-10!22;DOID:2994!3.62e-10!22;DOID:169!4.59e-10!6 | |||
|ontology_enrichment_disease_v019=DOID:171;1.01e-47;10!DOID:169;2.49e-36;6!DOID:3095;1.27e-21;22!DOID:2994;1.27e-21;22!DOID:3193;4.85e-08;2!DOID:962;4.85e-08;2!DOID:154;7.03e-08;2!DOID:4236;7.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.40e-47,10;DOID:169,2.73e-36,6;DOID:3095,1.47e-21,22;DOID:2994,1.47e-21,22;DOID:3193,5.02e-08,2;DOID:962,5.02e-08,2;DOID:154,5.37e-08,2;DOID:4236,5.37e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.27e-32!94;UBERON:0001016!9.27e-32!94;UBERON:0001049!1.12e-27!57;UBERON:0005068!1.12e-27!57;UBERON:0006241!1.12e-27!57;UBERON:0007135!1.12e-27!57;UBERON:0001017!4.93e-25!82;UBERON:0005743!6.15e-25!86;UBERON:0000955!1.58e-24!69;UBERON:0006238!1.58e-24!69;UBERON:0002616!1.67e-24!59;UBERON:0002780!2.16e-22!41;UBERON:0001890!2.16e-22!41;UBERON:0006240!2.16e-22!41;UBERON:0003080!1.04e-21!42;UBERON:0002346!7.40e-21!90;UBERON:0001893!6.41e-19!34;UBERON:0001869!1.84e-18!32;UBERON:0007023!2.61e-18!115;UBERON:0003075!7.42e-18!86;UBERON:0007284!7.42e-18!86;UBERON:0002791!1.96e-17!33;UBERON:0002020!7.20e-17!34;UBERON:0003528!7.20e-17!34;UBERON:0000924!1.48e-14!173;UBERON:0006601!1.48e-14!173;UBERON:0003056!2.66e-14!61;UBERON:0004121!1.84e-12!169;UBERON:0000013!3.37e-12!5;UBERON:0002410!3.37e-12!5;UBERON:0000033!1.38e-11!123;UBERON:0000153!1.78e-11!129;UBERON:0007811!1.78e-11!129;UBERON:0009663!6.54e-11!7;UBERON:0002308!6.78e-11!9;UBERON:0000125!6.78e-11!9;UBERON:0002619!1.53e-10!22;UBERON:0001950!5.81e-10!20;UBERON:0000369!2.20e-09!4;UBERON:0002435!2.20e-09!4;UBERON:0000204!2.20e-09!4;UBERON:0010082!2.20e-09!4;UBERON:0000010!3.93e-09!8;UBERON:0000956!5.34e-09!25;UBERON:0000203!5.34e-09!25;UBERON:0002420!2.72e-08!9;UBERON:0007245!2.72e-08!9;UBERON:0010009!2.72e-08!9;UBERON:0010011!2.72e-08!9;UBERON:0000454!2.72e-08!9;UBERON:0005383!1.51e-07!3;UBERON:0005382!1.51e-07!3;UBERON:0003076!3.57e-07!15;UBERON:0003057!3.57e-07!15;UBERON:0004733!4.42e-07!12;UBERON:0002028!4.42e-07!12;UBERON:0007277!4.42e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.70e-43;5!UBERON:0002410;1.70e-43;5!UBERON:0000010;2.29e-24;8!UBERON:0003688;2.95e-20;6!UBERON:0002358;2.95e-20;6!UBERON:0003684;2.95e-20;6!UBERON:0001178;2.95e-20;6!UBERON:0002346;4.40e-14;4!UBERON:0000923;4.40e-14;4!UBERON:0010316;4.40e-14;4!UBERON:0005291;4.40e-14;4!UBERON:0004457;1.00e-13;9!UBERON:0000042;1.00e-13;9!UBERON:0002050;1.85e-11;5!UBERON:0005423;1.85e-11;5!UBERON:0003714;4.85e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.90e-43,5;UBERON:0002410,1.90e-43,5;UBERON:0000010,2.44e-24,8;UBERON:0003688,3.16e-20,6;UBERON:0002358,3.16e-20,6;UBERON:0003684,3.16e-20,6;UBERON:0001178,3.16e-20,6;UBERON:0004457,1.98e-10,12;UBERON:0000042,1.98e-10,12;UBERON:0003714,5.02e-08,2 | |||
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| ||
|short_description=p@chr11:8680082..8680102,- | |||
}} | }} |
Latest revision as of 03:21, 24 July 2015
Short description: | p@chr11:8680082..8680102, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:8680082..8680102, - |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 2.32e-18 | 3 |
preadipocyte | 2.18e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.90e-43 | 5 |
autonomic nervous system | 1.90e-43 | 5 |
peripheral nervous system | 2.44e-24 | 8 |
omentum | 3.16e-20 | 6 |
peritoneum | 3.16e-20 | 6 |
abdominal cavity | 3.16e-20 | 6 |
visceral peritoneum | 3.16e-20 | 6 |
cavity lining | 1.98e-10 | 12 |
serous membrane | 1.98e-10 | 12 |
neural tissue | 5.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.40e-47 | 10 |
neuroendocrine tumor | 2.73e-36 | 6 |
germ cell and embryonal cancer | 1.47e-21 | 22 |
germ cell cancer | 1.47e-21 | 22 |
peripheral nerve sheath neoplasm | 5.02e-08 | 2 |
neurofibroma | 5.02e-08 | 2 |
mixed cell type cancer | 5.37e-08 | 2 |
carcinosarcoma | 5.37e-08 | 2 |