FFCP PHASE1:Hg19::chr11:85272373..85272374,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:85272373..85272374,- | |||
|description=CAGE_peak_at_chr11:85272373..85272374,- | |description=CAGE_peak_at_chr11:85272373..85272374,- | ||
|id=chr11:85272373..85272374,- | |id=chr11:85272373..85272374,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.88e-21;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4929;2.02e-11;2!DOID:3307;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.23e-11,2;DOID:3307,2.47e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.03e-14!115;UBERON:0001049!6.70e-14!57;UBERON:0005068!6.70e-14!57;UBERON:0006241!6.70e-14!57;UBERON:0007135!6.70e-14!57;UBERON:0001017!8.18e-14!82;UBERON:0002346!1.18e-13!90;UBERON:0005743!1.47e-13!86;UBERON:0003075!3.26e-12!86;UBERON:0007284!3.26e-12!86;UBERON:0000073!4.68e-12!94;UBERON:0001016!4.68e-12!94;UBERON:0000955!1.04e-11!69;UBERON:0006238!1.04e-11!69;UBERON:0002780!2.92e-11!41;UBERON:0001890!2.92e-11!41;UBERON:0006240!2.92e-11!41;UBERON:0003080!7.74e-11!42;UBERON:0002616!7.99e-11!59;UBERON:0002020!1.15e-10!34;UBERON:0003528!1.15e-10!34;UBERON:0001893!1.44e-10!34;UBERON:0001869!2.27e-10!32;UBERON:0002791!5.07e-10!33;UBERON:0000956!6.98e-09!25;UBERON:0000203!6.98e-09!25;UBERON:0000153!1.21e-08!129;UBERON:0007811!1.21e-08!129;UBERON:0000924!4.40e-08!173;UBERON:0006601!4.40e-08!173;UBERON:0002619!4.45e-08!22;UBERON:0000033!9.55e-08!123;UBERON:0001950!9.72e-08!20;UBERON:0004121!3.89e-07!169;UBERON:0003056!7.16e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;9.55e-17;5!UBERON:0001950;2.14e-15;20!UBERON:0002619;4.29e-14;22!UBERON:0000956;1.63e-12;25!UBERON:0000203;1.63e-12;25!UBERON:0002791;2.78e-09;32!UBERON:0001869;3.74e-09;32!UBERON:0000922;4.17e-09;49!UBERON:0001893;7.57e-09;34!UBERON:0003528;1.16e-08;34!UBERON:0002020;1.16e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.55e-17,5;UBERON:0001950,2.40e-15,20;UBERON:0002619,4.75e-14,22;UBERON:0000956,1.78e-12,25;UBERON:0000203,1.78e-12,25;UBERON:0002791,6.61e-10,32;UBERON:0001869,6.61e-10,32;UBERON:0003528,2.33e-09,34;UBERON:0002020,2.33e-09,34;UBERON:0001893,2.33e-09,34;UBERON:0002780,7.50e-08,41;UBERON:0001890,7.50e-08,41;UBERON:0003080,7.50e-08,41;UBERON:0006240,7.50e-08,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0.120596438625408,0,0.884634079449797,0.295547618953547,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0.225595660617181,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0,0.611030144933625,0,0.123563938946503,0.104421949505455,0,0.802577647298789,0,0.182454789215666,0,0,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0.451961481561065,0,0,0.253243183823515,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0.547621515567972,0,0,0,0.837847203816763,0.458320848023367,0,0.599037001496973,0,0,0.335917362433631,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0.272406812223151,0.643012593860077,0.137539436597234,0,0,0,0.0607495566580247,0.335434687599266,0.236417121897595,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0.13223260174269,0,0,0.213574825135389,0,0.828478110694391,0,0.395223263795889,0,0,0,0,0,0,0.157054096250234,0,0,0.3755727921195,0,0.221858103073705,0.0620964029413835,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0,0,0,0.169732529954025,0.212574920101683,0.123935764259002,0,0,0,0,0.705351887381368,0,0,1.41696576325585,1.11743701340006,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0,1.09394961803644,0,0,0,0,0,0.336283722218824,0.606965604236632,0,0,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0.222462803784138,0.078493092850514,0.314231179832004,0.560544326627578,0,0,0.47775168788705,0.214429632529969,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0.233939463462106,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.588925401344836,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0.371995018166751,0,0,0.630832124175395,0.327796715891087,0.253397002022874,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0.20686599172379,0.426467963801962,0.714193294391221,0,0.0620747142958579,0.112131862580613,0.12729431655633,2.82964064541507,0.217716747896961,0.342233301085281,0,0,0,0,0,1.9307228228694,2.0659796484515,2.34640942403454,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0.120596438625408,0,0.884634079449797,0.295547618953547,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0.225595660617181,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0,0.611030144933625,0,0.123563938946503,0.104421949505455,0,0.802577647298789,0,0.182454789215666,0,0,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0.451961481561065,0,0,0.253243183823515,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0.547621515567972,0,0,0,0.837847203816763,0.458320848023367,0,0.599037001496973,0,0,0.335917362433631,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0.272406812223151,0.643012593860077,0.137539436597234,0,0,0,0.0607495566580247,0.335434687599266,0.236417121897595,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0.13223260174269,0,0,0.213574825135389,0,0.828478110694391,0,0.395223263795889,0,0,0,0,0,0,0.157054096250234,0,0,0.3755727921195,0,0.221858103073705,0.0620964029413835,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0,0,0,0.169732529954025,0.212574920101683,0.123935764259002,0,0,0,0,0.705351887381368,0,0,1.41696576325585,1.11743701340006,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0,1.09394961803644,0,0,0,0,0,0.336283722218824,0.606965604236632,0,0,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0.222462803784138,0.078493092850514,0.314231179832004,0.560544326627578,0,0,0.47775168788705,0.214429632529969,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0.233939463462106,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.588925401344836,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0.371995018166751,0,0,0.630832124175395,0.327796715891087,0.253397002022874,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0.20686599172379,0.426467963801962,0.714193294391221,0,0.0620747142958579,0.112131862580613,0.12729431655633,2.82964064541507,0.217716747896961,0.342233301085281,0,0,0,0,0,1.9307228228694,2.0659796484515,2.34640942403454,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr11:85272373..85272374,- | |short_description=p@chr11:85272373..85272374,- | ||
}} | }} |
Latest revision as of 03:12, 24 July 2015
Short description: | p@chr11:85272373..85272374, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:85272373..85272374, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 9.55e-17 | 5 |
neocortex | 2.40e-15 | 20 |
regional part of cerebral cortex | 4.75e-14 | 22 |
cerebral cortex | 1.78e-12 | 25 |
pallium | 1.78e-12 | 25 |
regional part of telencephalon | 6.61e-10 | 32 |
cerebral hemisphere | 6.61e-10 | 32 |
brain grey matter | 2.33e-09 | 34 |
gray matter | 2.33e-09 | 34 |
telencephalon | 2.33e-09 | 34 |
regional part of forebrain | 7.50e-08 | 41 |
forebrain | 7.50e-08 | 41 |
anterior neural tube | 7.50e-08 | 41 |
future forebrain | 7.50e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.23e-11 | 2 |
teratoma | 2.47e-11 | 2 |