FFCP PHASE1:Hg19::chr11:76886405..76886416,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:76886405..76886416,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_at_chr11:76886405..76886416,+ | |description=CAGE_peak_at_chr11:76886405..76886416,+ | ||
|id=chr11:76886405..76886416,+ | |id=chr11:76886405..76886416,+ | ||
|ontology_enrichment_celltype=CL:0002619!4.63e-12!3;CL:0002194!9.13e-12!63;CL:0000576!9.13e-12!63;CL:0000040!9.13e-12!63;CL:0000559!9.13e-12!63;CL:0002009!2.78e-11!65;CL:0000839!3.37e-10!70;CL:0000557!5.33e-10!71;CL:0000235!4.21e-09!10;CL:0000766!4.35e-09!76 | |ontology_enrichment_celltype=CL:0002619!4.63e-12!3;CL:0002194!9.13e-12!63;CL:0000576!9.13e-12!63;CL:0000040!9.13e-12!63;CL:0000559!9.13e-12!63;CL:0002009!2.78e-11!65;CL:0000839!3.37e-10!70;CL:0000557!5.33e-10!71;CL:0000235!4.21e-09!10;CL:0000766!4.35e-09!76 | ||
|ontology_enrichment_celltype_v019=CL:0002619;1.14e-74;3!CL:0000235;1.52e-65;6!CL:0000473;4.58e-10;39!CL:0000234;4.58e-10;39!CL:0000766;1.01e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,7.81e-75,3;CL:0000235,1.65e-65,6;CL:0002194,3.12e-20,59;CL:0000576,3.12e-20,59;CL:0000040,3.12e-20,59;CL:0000559,3.12e-20,59;CL:0002009,1.39e-19,61;CL:0000839,3.93e-18,66;CL:0000557,7.24e-18,67;CL:0000766,1.19e-16,72;CL:0000763,3.66e-11,108;CL:0000049,3.66e-11,108;CL:0002087,1.73e-10,115;CL:0002031,4.71e-10,120;CL:0000738,7.15e-09,136;CL:0000473,1.17e-08,48;CL:0000234,1.17e-08,48;CL:0002032,1.73e-07,161;CL:0000837,1.73e-07,161;CL:0000037,3.59e-07,168;CL:0000115,6.52e-07,36;CL:0000988,8.41e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0010115;4.61e-26;1 | |||
|ontology_enrichment_disease=DOID:114!5.99e-08!2 | |ontology_enrichment_disease=DOID:114!5.99e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.88e-28!115;UBERON:0002193!2.55e-09!112;UBERON:0002405!6.06e-09!115;UBERON:0002390!1.58e-08!102;UBERON:0003061!1.58e-08!102;UBERON:0002371!1.92e-08!80;UBERON:0001474!1.36e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!6.88e-28!115;UBERON:0002193!2.55e-09!112;UBERON:0002405!6.06e-09!115;UBERON:0002390!1.58e-08!102;UBERON:0003061!1.58e-08!102;UBERON:0002371!1.92e-08!80;UBERON:0001474!1.36e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002363;4.61e-26;1!UBERON:0002360;9.40e-14;2!UBERON:0000094;9.40e-14;2!UBERON:0010743;9.40e-14;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,5.93e-26,1;UBERON:0007645,5.93e-26,1;UBERON:0007647,5.93e-26,1;UBERON:0010115,5.93e-26,1;UBERON:0002371,8.65e-16,76;UBERON:0001474,1.18e-14,82;UBERON:0002360,1.07e-13,2;UBERON:0000094,1.07e-13,2;UBERON:0010743,1.07e-13,2;UBERON:0004765,2.28e-13,90;UBERON:0002405,6.07e-13,93;UBERON:0002390,2.73e-12,98;UBERON:0003061,2.73e-12,98;UBERON:0001434,4.78e-12,100;UBERON:0002193,3.66e-11,108;UBERON:0002204,3.25e-07,167 | |||
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| ||
|short_description=p@chr11:76886405..76886416,+ | |short_description=p@chr11:76886405..76886416,+ | ||
}} | }} |
Latest revision as of 02:42, 24 July 2015
Short description: | p@chr11:76886405..76886416, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:76886405..76886416, + |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 7.81e-75 | 3 |
macrophage | 1.65e-65 | 6 |
monopoietic cell | 3.12e-20 | 59 |
monocyte | 3.12e-20 | 59 |
monoblast | 3.12e-20 | 59 |
promonocyte | 3.12e-20 | 59 |
macrophage dendritic cell progenitor | 1.39e-19 | 61 |
myeloid lineage restricted progenitor cell | 3.93e-18 | 66 |
granulocyte monocyte progenitor cell | 7.24e-18 | 67 |
myeloid leukocyte | 1.19e-16 | 72 |
myeloid cell | 3.66e-11 | 108 |
common myeloid progenitor | 3.66e-11 | 108 |
nongranular leukocyte | 1.73e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.71e-10 | 120 |
leukocyte | 7.15e-09 | 136 |
defensive cell | 1.17e-08 | 48 |
phagocyte | 1.17e-08 | 48 |
hematopoietic oligopotent progenitor cell | 1.73e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-07 | 161 |
hematopoietic stem cell | 3.59e-07 | 168 |
endothelial cell | 6.52e-07 | 36 |
hematopoietic cell | 8.41e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
dura mater | 5.93e-26 | 1 |
future meninx | 5.93e-26 | 1 |
ectomeninx | 5.93e-26 | 1 |
future dura mater | 5.93e-26 | 1 |
bone marrow | 8.65e-16 | 76 |
bone element | 1.18e-14 | 82 |
meninx | 1.07e-13 | 2 |
membrane organ | 1.07e-13 | 2 |
meningeal cluster | 1.07e-13 | 2 |
skeletal element | 2.28e-13 | 90 |
immune system | 6.07e-13 | 93 |
hematopoietic system | 2.73e-12 | 98 |
blood island | 2.73e-12 | 98 |
skeletal system | 4.78e-12 | 100 |
hemolymphoid system | 3.66e-11 | 108 |
musculoskeletal system | 3.25e-07 | 167 |