FFCP PHASE1:Hg19::chr11:75048593..75048598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:75048593..75048598,+ | |||
|coexpression_cluster_id=C1351 | |coexpression_cluster_id=C1351 | ||
|description=CAGE_peak_at_chr11:75048593..75048598,+ | |description=CAGE_peak_at_chr11:75048593..75048598,+ | ||
|id=chr11:75048593..75048598,+ | |id=chr11:75048593..75048598,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.97e-55!42;CL:0000766!5.11e-55!76;CL:0000557!6.62e-52!71;CL:0000860!2.43e-51!45;CL:0000839!5.64e-49!70;CL:0002009!4.46e-46!65;CL:0002194!5.49e-44!63;CL:0000576!5.49e-44!63;CL:0000040!5.49e-44!63;CL:0000559!5.49e-44!63;CL:0000763!4.05e-40!112;CL:0000049!4.05e-40!112;CL:0000738!9.20e-35!140;CL:0002031!9.19e-29!124;CL:0000037!1.45e-28!172;CL:0000566!1.45e-28!172;CL:0000988!1.50e-26!182;CL:0002032!1.88e-26!165;CL:0000837!1.88e-26!165;CL:0002087!5.51e-26!119;CL:0000134!5.78e-12!358;CL:0002320!1.44e-11!365;CL:0000219!3.59e-10!390;CL:0000048!2.95e-09!430;CL:0000723!5.23e-09!436;CL:0000034!1.10e-08!444;CL:0002274!2.49e-08!5;CL:0000457!2.49e-08!5;CL:0002191!2.49e-08!5;CL:0000097!2.49e-08!5;CL:0000831!2.49e-08!5;CL:0002028!2.49e-08!5;CL:0002393!3.52e-08!9;CL:0002397!3.52e-08!9 | |ontology_enrichment_celltype=CL:0002057!1.97e-55!42;CL:0000766!5.11e-55!76;CL:0000557!6.62e-52!71;CL:0000860!2.43e-51!45;CL:0000839!5.64e-49!70;CL:0002009!4.46e-46!65;CL:0002194!5.49e-44!63;CL:0000576!5.49e-44!63;CL:0000040!5.49e-44!63;CL:0000559!5.49e-44!63;CL:0000763!4.05e-40!112;CL:0000049!4.05e-40!112;CL:0000738!9.20e-35!140;CL:0002031!9.19e-29!124;CL:0000037!1.45e-28!172;CL:0000566!1.45e-28!172;CL:0000988!1.50e-26!182;CL:0002032!1.88e-26!165;CL:0000837!1.88e-26!165;CL:0002087!5.51e-26!119;CL:0000134!5.78e-12!358;CL:0002320!1.44e-11!365;CL:0000219!3.59e-10!390;CL:0000048!2.95e-09!430;CL:0000723!5.23e-09!436;CL:0000034!1.10e-08!444;CL:0002274!2.49e-08!5;CL:0000457!2.49e-08!5;CL:0002191!2.49e-08!5;CL:0000097!2.49e-08!5;CL:0000831!2.49e-08!5;CL:0002028!2.49e-08!5;CL:0002393!3.52e-08!9;CL:0002397!3.52e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-31;33!CL:0002057;1.43e-31;33!CL:0000473;6.83e-24;39!CL:0000234;6.83e-24;39!CL:0000576;1.08e-22;48!CL:0002393;2.07e-19;6!CL:0002397;2.07e-19;6!CL:0000766;1.01e-16;69!CL:0002087;7.05e-10;104!CL:0000763;1.71e-08;100!CL:0001014;1.12e-07;2!CL:0001016;1.12e-07;2!CL:0000738;1.48e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.26e-48,42;CL:0002057,3.26e-48,42;CL:0000473,5.12e-42,48;CL:0000234,5.12e-42,48;CL:0000557,2.72e-39,67;CL:0002009,1.43e-37,61;CL:0000766,1.79e-36,72;CL:0000839,1.49e-34,66;CL:0002194,2.46e-33,59;CL:0000576,2.46e-33,59;CL:0000040,2.46e-33,59;CL:0000559,2.46e-33,59;CL:0000763,1.91e-27,108;CL:0000049,1.91e-27,108;CL:0000738,1.69e-21,136;CL:0002031,2.20e-21,120;CL:0002032,6.43e-18,161;CL:0000837,6.43e-18,161;CL:0000037,4.19e-17,168;CL:0002087,1.64e-16,115;CL:0000988,3.76e-16,177;CL:0002393,4.06e-13,9;CL:0002397,4.06e-13,9;CL:0001014,1.12e-07,2;CL:0001016,1.12e-07,2;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;9.74e-32;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.50e-45!80;UBERON:0001474!1.07e-41!86;UBERON:0002390!3.34e-39!102;UBERON:0003061!3.34e-39!102;UBERON:0002193!4.64e-35!112;UBERON:0004765!1.71e-34!101;UBERON:0001434!1.71e-34!101;UBERON:0002405!1.88e-29!115;UBERON:0003081!1.45e-19!216;UBERON:0002204!1.46e-19!167;UBERON:0002384!6.91e-12!375 | |ontology_enrichment_uberon=UBERON:0002371!2.50e-45!80;UBERON:0001474!1.07e-41!86;UBERON:0002390!3.34e-39!102;UBERON:0003061!3.34e-39!102;UBERON:0002193!4.64e-35!112;UBERON:0004765!1.71e-34!101;UBERON:0001434!1.71e-34!101;UBERON:0002405!1.88e-29!115;UBERON:0003081!1.45e-19!216;UBERON:0002204!1.46e-19!167;UBERON:0002384!6.91e-12!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.60e-34,76;UBERON:0001474,6.49e-32,82;UBERON:0004765,5.71e-29,90;UBERON:0002405,5.39e-28,93;UBERON:0002390,1.68e-26,98;UBERON:0003061,1.68e-26,98;UBERON:0001434,6.06e-26,100;UBERON:0002193,6.40e-24,108;UBERON:0002204,6.36e-15,167;UBERON:0003081,5.67e-12,203;UBERON:0000926,4.75e-07,315;UBERON:0004120,4.75e-07,315;UBERON:0006603,4.75e-07,315;UBERON:0002384,9.92e-07,371 | |||
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|short_description=p@chr11:75048593..75048598,+ | |short_description=p@chr11:75048593..75048598,+ | ||
}} | }} |
Latest revision as of 02:32, 24 July 2015
Short description: | p@chr11:75048593..75048598, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:75048593..75048598, + |
Coexpression cluster: | C1351_immature_CD14_CD34_Peripheral_Mast_Basophils_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.26e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.26e-48 | 42 |
defensive cell | 5.12e-42 | 48 |
phagocyte | 5.12e-42 | 48 |
granulocyte monocyte progenitor cell | 2.72e-39 | 67 |
macrophage dendritic cell progenitor | 1.43e-37 | 61 |
myeloid leukocyte | 1.79e-36 | 72 |
myeloid lineage restricted progenitor cell | 1.49e-34 | 66 |
monopoietic cell | 2.46e-33 | 59 |
monocyte | 2.46e-33 | 59 |
monoblast | 2.46e-33 | 59 |
promonocyte | 2.46e-33 | 59 |
myeloid cell | 1.91e-27 | 108 |
common myeloid progenitor | 1.91e-27 | 108 |
leukocyte | 1.69e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 2.20e-21 | 120 |
hematopoietic oligopotent progenitor cell | 6.43e-18 | 161 |
hematopoietic multipotent progenitor cell | 6.43e-18 | 161 |
hematopoietic stem cell | 4.19e-17 | 168 |
nongranular leukocyte | 1.64e-16 | 115 |
hematopoietic cell | 3.76e-16 | 177 |
intermediate monocyte | 4.06e-13 | 9 |
CD14-positive, CD16-positive monocyte | 4.06e-13 | 9 |
CD1a-positive Langerhans cell | 1.12e-07 | 2 |
immature CD1a-positive Langerhans cell | 1.12e-07 | 2 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.60e-34 | 76 |
bone element | 6.49e-32 | 82 |
skeletal element | 5.71e-29 | 90 |
immune system | 5.39e-28 | 93 |
hematopoietic system | 1.68e-26 | 98 |
blood island | 1.68e-26 | 98 |
skeletal system | 6.06e-26 | 100 |
hemolymphoid system | 6.40e-24 | 108 |
musculoskeletal system | 6.36e-15 | 167 |
lateral plate mesoderm | 5.67e-12 | 203 |
mesoderm | 4.75e-07 | 315 |
mesoderm-derived structure | 4.75e-07 | 315 |
presumptive mesoderm | 4.75e-07 | 315 |
connective tissue | 9.92e-07 | 371 |