FFCP PHASE1:Hg19::chr11:72448082..72448133,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:72448082..72448133,+ to FFCP PHASE1:Hg19::chr11:72448082..72448133,+: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:72448082..72448133,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr11:72448082..72448133,+ | |||
|id=chr11:72448082..72448133,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.90e-85!42;CL:0000860!1.11e-78!45;CL:0000766!3.65e-76!76;CL:0000738!2.42e-71!140;CL:0000557!1.01e-61!71;CL:0002009!1.07e-59!65;CL:0000839!1.33e-57!70;CL:0002194!1.35e-56!63;CL:0000576!1.35e-56!63;CL:0000040!1.35e-56!63;CL:0000559!1.35e-56!63;CL:0000037!4.49e-56!172;CL:0000566!4.49e-56!172;CL:0000988!1.71e-53!182;CL:0000763!2.70e-52!112;CL:0000049!2.70e-52!112;CL:0002031!1.78e-51!124;CL:0002087!9.57e-51!119;CL:0002032!5.84e-50!165;CL:0000837!5.84e-50!165;CL:0000094!4.40e-19!8;CL:0002393!8.54e-19!9;CL:0002397!8.54e-19!9;CL:0000134!2.89e-18!358;CL:0002320!1.54e-17!365;CL:0000219!1.18e-15!390;CL:0000034!1.84e-13!444;CL:0000081!2.24e-13!11;CL:0000048!3.71e-13!430;CL:0000723!1.05e-12!436;CL:0000775!3.33e-08!3;CL:0000767!4.81e-08!3;CL:0000842!1.38e-07!3;CL:0000623!1.92e-07!3;CL:0000825!1.92e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.58e-75;33!CL:0002057;5.58e-75;33!CL:0000576;1.67e-53;48!CL:0000473;1.35e-51;39!CL:0000234;1.35e-51;39!CL:0000766;6.26e-44;69!CL:0000094;1.46e-24;8!CL:0000763;2.93e-20;100!CL:0002087;1.24e-19;104!CL:0002393;9.69e-18;6!CL:0002397;9.69e-18;6!CL:0000081;2.02e-17;11!CL:0000738;2.12e-15;136!CL:0000775;2.77e-10;3!CL:0000767;4.68e-10;3!CL:0000226;1.66e-09;3!CL:0000842;1.66e-09;3!CL:0000988;2.10e-09;177!CL:0000623;2.74e-09;3!CL:0000784;2.71e-08;3!CL:0000219;3.40e-08;193!CL:0000771;1.20e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.61e-102,42;CL:0002057,6.61e-102,42;CL:0000766,1.35e-97,72;CL:0000473,8.92e-88,48;CL:0000234,8.92e-88,48;CL:0000738,2.98e-76,136;CL:0000839,3.53e-73,66;CL:0000557,6.29e-72,67;CL:0002194,1.49e-71,59;CL:0000576,1.49e-71,59;CL:0000040,1.49e-71,59;CL:0000559,1.49e-71,59;CL:0002009,6.99e-69,61;CL:0000763,5.78e-61,108;CL:0000049,5.78e-61,108;CL:0000037,4.87e-59,168;CL:0000988,2.60e-55,177;CL:0002087,6.67e-55,115;CL:0002031,8.10e-52,120;CL:0002032,1.69e-51,161;CL:0000837,1.69e-51,161;CL:0000094,1.36e-24,8;CL:0000134,2.65e-21,354;CL:0002320,1.33e-20,361;CL:0002393,1.48e-19,9;CL:0002397,1.48e-19,9;CL:0000219,3.92e-18,386;CL:0000081,1.92e-17,11;CL:0000034,8.65e-16,441;CL:0000048,4.09e-15,427;CL:0000723,1.07e-14,433;CL:0000775,2.73e-10,3;CL:0000767,4.41e-10,3;CL:0000226,1.76e-09,3;CL:0000842,1.76e-09,3;CL:0000623,2.70e-09,3;CL:0000825,2.70e-09,3;CL:0000784,3.14e-08,3;CL:0000771,1.20e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.65e-73;42!CL:0000049;8.08e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.85e-57!102;UBERON:0003061!2.85e-57!102;UBERON:0002371!3.34e-53!80;UBERON:0002193!1.04e-50!112;UBERON:0001474!1.65e-48!86;UBERON:0004765!5.78e-41!101;UBERON:0001434!5.78e-41!101;UBERON:0002405!1.01e-32!115;UBERON:0003081!2.12e-21!216;UBERON:0002204!3.30e-21!167;UBERON:0002384!1.51e-16!375;UBERON:0000178!1.24e-09!15;UBERON:0000179!1.24e-09!15;UBERON:0000463!1.24e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.09e-08;15!UBERON:0000179;5.09e-08;15!UBERON:0000463;5.09e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.29e-63,98;UBERON:0003061,1.29e-63,98;UBERON:0002371,3.92e-62,76;UBERON:0001474,8.74e-57,82;UBERON:0002193,1.40e-56,108;UBERON:0004765,9.39e-51,90;UBERON:0002405,9.32e-49,93;UBERON:0001434,1.46e-44,100;UBERON:0003081,2.02e-25,203;UBERON:0002204,3.59e-22,167;UBERON:0002384,1.20e-19,371;UBERON:0000926,6.46e-12,315;UBERON:0004120,6.46e-12,315;UBERON:0006603,6.46e-12,315;UBERON:0000178,4.97e-08,15;UBERON:0000179,4.97e-08,15;UBERON:0000463,4.97e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.4027849164014,18.8076405067634,35.9173406093296,0,0,0,0,0,0,53.7375546275921,65.1769454277961,58.3759242225641,0,0,0,4.36194716338694,3.02300754951048,2.66842467306598,17.4321777679263,15.2132118568076,29.7318116059299,12.9461576544968,13.0641960329841,17.9726494715325,47.5749039416534,45.8294125344517,50.1078000399065,10.1650863353007,6.27684145133045,9.43838634669355,30.9144731294612,28.8836124368484,35.1635419189473,1.9791078011203,3.19141852194611,0.426224750532694,22.9265298516581,18.7237124148076,29.272645702792,15.8286659111748,12.5155900420848,27.5829832775498,6.05399502633369,25.0428792471544,25.6334533827116,6.5489138756702,7.86635909870661,8.17668717482666,12.468478057261,6.45760639218477,7.39337698806569,1.99508920618874,2.18808344918999,0.730656615058536,0,0,0,0,0,0,0,0,0,1.76171156811282,1.52909291250092,2.64342657158052,10.6496626966492,0,0.196709770113833,0.393010762749165,0.822405995998037,0,0,0.946895611469467,0,0.222820913770347,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,4.63695509416885,4.27904313253612,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,2.38490624305342,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,158.136500923276,217.156947923062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,13.8909837412317,1.44119953416961,7.95327330586194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6248148519137,8.62510299438069,14.1177339907723,0,0,0,0,0,50.9324776284084,23.932916736322,83.2975182006431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.85718499266972,22.6499910859548,18.0369572687821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,0,0.569647187174163,0,1.64544909234478,1.94541993357815,2.70015718619057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.4027849164014,18.8076405067634,35.9173406093296,0,0,0,0,0,0,53.7375546275921,65.1769454277961,58.3759242225641,0,0,0,4.36194716338694,3.02300754951048,2.66842467306598,17.4321777679263,15.2132118568076,29.7318116059299,12.9461576544968,13.0641960329841,17.9726494715325,47.5749039416534,45.8294125344517,50.1078000399065,10.1650863353007,6.27684145133045,9.43838634669355,30.9144731294612,28.8836124368484,35.1635419189473,1.9791078011203,3.19141852194611,0.426224750532694,22.9265298516581,18.7237124148076,29.272645702792,15.8286659111748,12.5155900420848,27.5829832775498,6.05399502633369,25.0428792471544,25.6334533827116,6.5489138756702,7.86635909870661,8.17668717482666,12.468478057261,6.45760639218477,7.39337698806569,1.99508920618874,2.18808344918999,0.730656615058536,0,0,0,0,0,0,0,0,0,1.76171156811282,1.52909291250092,2.64342657158052,10.6496626966492,0,0.196709770113833,0.393010762749165,0.822405995998037,0,0,0.946895611469467,0,0.222820913770347,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,4.63695509416885,4.27904313253612,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,2.38490624305342,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,158.136500923276,217.156947923062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,13.8909837412317,1.44119953416961,7.95327330586194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6248148519137,8.62510299438069,14.1177339907723,0,0,0,0,0,50.9324776284084,23.932916736322,83.2975182006431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.85718499266972,22.6499910859548,18.0369572687821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,0,0.569647187174163,0,1.64544909234478,1.94541993357815,2.70015718619057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:72448082..72448133,+ | |||
}} | }} |
Latest revision as of 02:14, 24 July 2015
Short description: | p@chr11:72448082..72448133, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:72448082..72448133, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.29e-63 | 98 |
blood island | 1.29e-63 | 98 |
bone marrow | 3.92e-62 | 76 |
bone element | 8.74e-57 | 82 |
hemolymphoid system | 1.40e-56 | 108 |
skeletal element | 9.39e-51 | 90 |
immune system | 9.32e-49 | 93 |
skeletal system | 1.46e-44 | 100 |
lateral plate mesoderm | 2.02e-25 | 203 |
musculoskeletal system | 3.59e-22 | 167 |
connective tissue | 1.20e-19 | 371 |
mesoderm | 6.46e-12 | 315 |
mesoderm-derived structure | 6.46e-12 | 315 |
presumptive mesoderm | 6.46e-12 | 315 |
blood | 4.97e-08 | 15 |
haemolymphatic fluid | 4.97e-08 | 15 |
organism substance | 4.97e-08 | 15 |