FFCP PHASE1:Hg19::chr11:69467977..69467992,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:69467977..69467992,+ to FFCP PHASE1:Hg19::chr11:69467977..69467992,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:69467977..69467992,+ | |||
|coexpression_cluster_id=C807 | |||
|description=CAGE_peak_at_chr11:69467977..69467992,+ | |||
|id=chr11:69467977..69467992,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.17e-17!180;CL:0002321!9.62e-17!248;CL:0000220!1.43e-16!246;CL:0000548!1.04e-12!679;CL:0000004!1.04e-12!679;CL:0000255!1.04e-12!679;CL:0000012!3.47e-12!682;CL:0000192!5.99e-11!42;CL:0000514!5.99e-11!42;CL:0000359!6.96e-10!32;CL:0000680!9.33e-10!57;CL:0000056!9.33e-10!57;CL:0000355!9.33e-10!57;CL:0000066!1.67e-09!254;CL:0000144!9.05e-09!625;CL:0000187!1.35e-08!54;CL:0000183!5.09e-08!59;CL:0000393!8.12e-08!60;CL:0000211!8.12e-08!60;CL:0000222!8.33e-08!119;CL:0000057!3.29e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.90e-11;32!CL:0002595;1.38e-10;5!CL:0000192;1.51e-07;43!CL:0002579;6.48e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.29e-11,32;CL:0002595,2.23e-10,5;CL:0000192,1.35e-09,43;CL:0000514,1.35e-09,43;CL:0000680,5.01e-07,58;CL:0000056,5.01e-07,58;CL:0000355,5.01e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.51e-07;43!UBERON:0005795;2.28e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.19e-09!143;DOID:193!7.22e-08!29;DOID:120!1.18e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:0060084;7.71e-08;3!DOID:127;7.71e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.78e-08,3;DOID:127,6.78e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002100!2.56e-12!216;UBERON:0005256!2.90e-12!143;UBERON:0000486!2.11e-10!82;UBERON:0000914!7.74e-10!83;UBERON:0002329!7.74e-10!83;UBERON:0003077!7.74e-10!83;UBERON:0003059!7.74e-10!83;UBERON:0007282!7.74e-10!83;UBERON:0009618!7.74e-10!83;UBERON:0007285!7.74e-10!83;UBERON:0003104!9.49e-10!238;UBERON:0009142!9.49e-10!238;UBERON:0004290!1.14e-09!70;UBERON:0001134!6.60e-09!61;UBERON:0002036!6.60e-09!61;UBERON:0003082!6.60e-09!61;UBERON:0000475!3.73e-08!365;UBERON:0002385!3.86e-08!63;UBERON:0001015!3.86e-08!63;UBERON:0000383!3.86e-08!63;UBERON:0000468!9.05e-08!659;UBERON:0001637!2.67e-07!42;UBERON:0003509!2.67e-07!42;UBERON:0004572!2.67e-07!42;UBERON:0000490!3.71e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.38e-10;5!UBERON:0001533;1.38e-10;5!UBERON:0004573;1.50e-08;33!UBERON:0004571;1.50e-08;33!UBERON:0003513;2.00e-07;7!UBERON:0001637;2.69e-07;42!UBERON:0003509;2.69e-07;42!UBERON:0004572;2.69e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.23e-10,5;UBERON:0001533,2.23e-10,5;UBERON:0001637,5.54e-10,42;UBERON:0003509,5.54e-10,42;UBERON:0004572,5.54e-10,42;UBERON:0004573,3.09e-09,33;UBERON:0004571,3.09e-09,33;UBERON:0007524,7.19e-08,73;UBERON:0002329,2.55e-07,71;UBERON:0003059,2.55e-07,71;UBERON:0007282,2.55e-07,71;UBERON:0004290,2.55e-07,71;UBERON:0009618,2.55e-07,71;UBERON:0003513,2.78e-07,7;UBERON:0003077,3.77e-07,72;UBERON:0007285,3.77e-07,72;UBERON:0001134,3.94e-07,62;UBERON:0002036,3.94e-07,62;UBERON:0003082,3.94e-07,62;UBERON:0000486,4.23e-07,83;UBERON:0002100,6.08e-07,199;UBERON:0002385,9.04e-07,64;UBERON:0001015,9.04e-07,64;UBERON:0000383,9.04e-07,64 | |||
|phase1_expression=2.90685406832891,1.71280419112787,0.281908808191942,0,0,1.74467704820074,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0.218441372130172,1.05506791291381,0.37129905888014,0,4.70627602516243,2.41077811209591,2.19093027116212,3.41552959153355,0.123121058076788,0.408001382488506,0,0,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0.739508020333575,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.434539556882471,0.795285947051099,0.486634870302636,0.378139268656271,2.66075276955077,0.351339142772504,0,0.364295288292542,0,0.649094787309367,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0.417989933073621,1.03366703667732,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,0.872188104285069,3.47880366186723,1.39293562831038,1.05927344650575,0.286836620748814,0.709336764396714,0,0,0.49333509683432,0,0.134710672069688,0.653847612453835,0,0,0,0.936480230490962,0,0.597794722207204,0.117434498643765,0.161872944368132,0.140450806702248,1.42907919878425,0.61417158655884,0.206651562351531,0,0.741800787835671,0,1.43723628363248,0.168336113954066,0.375355559615893,0,0.438977620880838,1.83892677479412,0.150238058906597,0.113432183160021,0.179389635688862,0.427114777637135,0.423863802319124,0.300091096084402,0.103052529238439,0,0.18611685633159,0.843881661206331,0.584622030967192,0,0.0920498986422993,0.161646056818812,0.710019185033229,0.403008392910561,0,0.386521706326594,0,0.286804595389004,0.121973706129595,0.265059536642971,0.232387885739037,0.207322110030741,0.252320850875628,0,3.12899064659632,1.28648187638577,0,0.464367928031979,2.16563844500876,0.118306800039844,0.505754070234305,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0.100528972411631,0.370353780634118,0,0,0,0.231860809950154,0.234817388471643,0.144366447761074,0.925971025153221,0.570762456703795,0,0,0,0.702012795417713,0.297262324577456,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0.761974731506028,1.14596527667483,0,0,0.925447434329912,5.40617504119051,2.00078502841405,0,0,0.1466765716419,0.775630294546667,0,1.690605505112,1.32969058292435,2.08014873822732,0,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0,0,0,0.602878754119172,0,0.199945982364114,0,0,2.10833939483032,0.479249710983165,1.14861935834114,0,2.60606352001643,0.61642896765115,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,0.664225598535437,0.368738337083406,1.73767228936166,0,0,0,0,0,0,1.66435439510497,0,0.992431231275107,1.2276957863045,1.68396056659844,1.15325234330131,1.02341449813341,4.02134802859019,1.48418066444991,0.462629081407967,0.355123450626254,0.328508624055237,0,0.813472649219715,0.120859449591622,1.60405176242628,0.0920809889358963,0.114814448164607,0.728364672026868,1.18011973463482,0.902399225814824,0.462092022626489,0,4.38417673959782,0.422206515571503,0,0.680374821106063,0.431831832204279,0,0.812839312631559,0,3.56826782263054,1.66215201785745,0.895499018888713,0,0,0.512900250232778,1.31205858279882,0.650756789328606,0,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.267096106940212,0.661139661443912,0,0.127612712494584,0,2.32422774648643,0.31481234683064,0.6970372701606,0,0.532306030317022,0,1.29726953372744,0.715624433709956,0,0.949138274156178,0.953150969619124,1.02359116524534,0,0.636406495851874,0,0.359744915166629,0,0.706874414074119,0.404364963146632,3.17020642346017,0,0,1.70599442741899,1.05650146756755,0.682499557039929,0.282810863907425,2.26016233240486,1.10273068709225,5.30751180192976,3.5076070820301,1.15755106853338,0.655894752046633,0.811641507850816,0.30982349809975,1.12678241012897,0.430234056612155,0.196498082026242,1.07001315444375,0.354761064070598,0.422215270595328,0,0.75894634753143,0,0.192444225451024,0,1.08890984861323,0,2.15252686335615,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,2.41544127663434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0,1.53580351049616,0,0,0.333926115068718,0,0.844501632511974,0,0,0,0.818149460017238,0,4.0435146396035,0.539210106883961,1.25314822272926,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.341380344856499,0.762760950878299,0,0,3.2076507472158,0,0,0,0,0.110579259931225,0.591095237907095,0,0.21787692703798,0.557694977114413,0,0.113942055847001,0.23056390438806,0.179515288819544,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0.632994193584081,0.489698424477443,0.141353071433941,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0.782658475728359,0,0,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| ||
|short_description=p@chr11:69467977..69467992,+ | |||
}} | }} |
Latest revision as of 01:58, 24 July 2015
Short description: | p@chr11:69467977..69467992, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:69467977..69467992, + |
Coexpression cluster: | C807_neuroectodermal_renal_leiomyoma_Smooth_neuroblastoma_Aortic_Melanocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.29e-11 | 32 |
smooth muscle cell of the subclavian artery | 2.23e-10 | 5 |
smooth muscle cell | 1.35e-09 | 43 |
smooth muscle myoblast | 1.35e-09 | 43 |
muscle precursor cell | 5.01e-07 | 58 |
myoblast | 5.01e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.01e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 2.23e-10 | 5 |
subclavian artery | 2.23e-10 | 5 |
artery | 5.54e-10 | 42 |
arterial blood vessel | 5.54e-10 | 42 |
arterial system | 5.54e-10 | 42 |
systemic artery | 3.09e-09 | 33 |
systemic arterial system | 3.09e-09 | 33 |
dense mesenchyme tissue | 7.19e-08 | 73 |
somite | 2.55e-07 | 71 |
presomitic mesoderm | 2.55e-07 | 71 |
presumptive segmental plate | 2.55e-07 | 71 |
dermomyotome | 2.55e-07 | 71 |
trunk paraxial mesoderm | 2.55e-07 | 71 |
trunk blood vessel | 2.78e-07 | 7 |
paraxial mesoderm | 3.77e-07 | 72 |
presumptive paraxial mesoderm | 3.77e-07 | 72 |
skeletal muscle tissue | 3.94e-07 | 62 |
striated muscle tissue | 3.94e-07 | 62 |
myotome | 3.94e-07 | 62 |
multilaminar epithelium | 4.23e-07 | 83 |
trunk | 6.08e-07 | 199 |
muscle tissue | 9.04e-07 | 64 |
musculature | 9.04e-07 | 64 |
musculature of body | 9.04e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.78e-08 | 3 |
leiomyoma | 6.78e-08 | 3 |