FFCP PHASE1:Hg19::chr11:66811898..66811900,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:66811898..66811900,- | |||
|coexpression_cluster_id=C423 | |coexpression_cluster_id=C423 | ||
|description=CAGE_peak_at_chr11:66811898..66811900,- | |description=CAGE_peak_at_chr11:66811898..66811900,- | ||
|id=chr11:66811898..66811900,- | |id=chr11:66811898..66811900,- | ||
|ontology_enrichment_celltype=CL:0000153!2.48e-23!9;CL:0000447!2.48e-23!9;CL:0000667!9.97e-23!6;CL:0000058!9.97e-23!6;CL:0000138!9.97e-23!6;CL:0002617!2.90e-18!2;CL:0000327!5.72e-15!14;CL:0000136!4.66e-14!15;CL:0002580!1.36e-12!3;CL:0002615!2.40e-12!3;CL:0002579!3.37e-12!3;CL:0002334!1.24e-11!12;CL:0002620!9.27e-09!23;CL:0000057!1.10e-07!75;CL:0000499!1.11e-07!27 | |ontology_enrichment_celltype=CL:0000153!2.48e-23!9;CL:0000447!2.48e-23!9;CL:0000667!9.97e-23!6;CL:0000058!9.97e-23!6;CL:0000138!9.97e-23!6;CL:0002617!2.90e-18!2;CL:0000327!5.72e-15!14;CL:0000136!4.66e-14!15;CL:0002580!1.36e-12!3;CL:0002615!2.40e-12!3;CL:0002579!3.37e-12!3;CL:0002334!1.24e-11!12;CL:0002620!9.27e-09!23;CL:0000057!1.10e-07!75;CL:0000499!1.11e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002580;2.51e-53;3!CL:0002334;2.22e-30;12!CL:0002617;4.21e-21;2!CL:0002579;1.50e-14;3!CL:0002615;1.96e-14;3!CL:0000136;3.43e-13;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,2.87e-53,3;CL:0002334,2.45e-30,12;CL:0002617,3.81e-21,2;CL:0002579,1.60e-14,3;CL:0002615,1.83e-14,3;CL:0000136,1.34e-11,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4235!2.26e-09!1 | |ontology_enrichment_disease=DOID:4235!2.26e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!8.43e-23!6;UBERON:0002358!8.43e-23!6;UBERON:0003684!8.43e-23!6;UBERON:0001178!8.43e-23!6;UBERON:0004457!1.58e-17!12;UBERON:0000042!1.58e-17!12;UBERON:0000310!4.27e-14!10;UBERON:0001443!7.85e-13!11;UBERON:0002079!6.31e-10!1;UBERON:0002135!1.62e-09!1;UBERON:0002363!2.67e-09!1;UBERON:0007647!2.67e-09!1;UBERON:0010115!2.67e-09!1 | |ontology_enrichment_uberon=UBERON:0003688!8.43e-23!6;UBERON:0002358!8.43e-23!6;UBERON:0003684!8.43e-23!6;UBERON:0001178!8.43e-23!6;UBERON:0004457!1.58e-17!12;UBERON:0000042!1.58e-17!12;UBERON:0000310!4.27e-14!10;UBERON:0001443!7.85e-13!11;UBERON:0002079!6.31e-10!1;UBERON:0002135!1.62e-09!1;UBERON:0002363!2.67e-09!1;UBERON:0007647!2.67e-09!1;UBERON:0010115!2.67e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;3.05e-36;10!UBERON:0001443;4.79e-33;11!UBERON:0003688;3.11e-27;6!UBERON:0002358;3.11e-27;6!UBERON:0003684;3.11e-27;6!UBERON:0001178;3.11e-27;6!UBERON:0004457;1.48e-18;9!UBERON:0000042;1.48e-18;9!UBERON:0009569;2.87e-07;110!UBERON:0000915;4.59e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,3.05e-36,10;UBERON:0001443,4.79e-33,11;UBERON:0003688,3.11e-27,6;UBERON:0002358,3.11e-27,6;UBERON:0003684,3.11e-27,6;UBERON:0001178,3.11e-27,6;UBERON:0004457,3.36e-14,12;UBERON:0000042,3.36e-14,12;UBERON:0009569,1.80e-09,112;UBERON:0000915,1.15e-07,52 | |||
|phase1_expression=2.54349730978779,0.642301571672949,1.55049844505568,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.869079113764942,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.37223371266318,0.168776332241266,0.292311015483596,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,4.45039722535381,0,0.256278298511402,2.04682899626681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=2.54349730978779,0.642301571672949,1.55049844505568,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.869079113764942,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.37223371266318,0.168776332241266,0.292311015483596,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,4.45039722535381,0,0.256278298511402,2.04682899626681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:66811898..66811900,- | |short_description=p@chr11:66811898..66811900,- | ||
}} | }} |
Latest revision as of 01:29, 24 July 2015
Short description: | p@chr11:66811898..66811900, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66811898..66811900, - |
Coexpression cluster: | C423_Preadipocyte_Adipocyte_Chondrocyte_tenocyte_Osteoblast_Synoviocyte_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 2.87e-53 | 3 |
preadipocyte | 2.45e-30 | 12 |
adipocyte of breast | 3.81e-21 | 2 |
omentum preadipocyte | 1.60e-14 | 3 |
adipocyte of omentum tissue | 1.83e-14 | 3 |
fat cell | 1.34e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
breast | 3.05e-36 | 10 |
chest | 4.79e-33 | 11 |
omentum | 3.11e-27 | 6 |
peritoneum | 3.11e-27 | 6 |
abdominal cavity | 3.11e-27 | 6 |
visceral peritoneum | 3.11e-27 | 6 |
cavity lining | 3.36e-14 | 12 |
serous membrane | 3.36e-14 | 12 |
subdivision of trunk | 1.80e-09 | 112 |
thoracic segment of trunk | 1.15e-07 | 52 |