FFCP PHASE1:Hg19::chr11:66711224..66711227,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:66711224..66711227,- | |||
|description=CAGE_peak_at_chr11:66711224..66711227,- | |description=CAGE_peak_at_chr11:66711224..66711227,- | ||
|id=chr11:66711224..66711227,- | |id=chr11:66711224..66711227,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;4.27e-34;1!UBERON:0005425;4.27e-34;1!UBERON:0003056;2.45e-12;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.69e-18!94;UBERON:0001016!5.69e-18!94;UBERON:0001017!5.38e-16!82;UBERON:0005743!1.15e-15!86;UBERON:0002616!1.20e-14!59;UBERON:0001893!2.19e-14!34;UBERON:0001049!2.26e-14!57;UBERON:0005068!2.26e-14!57;UBERON:0006241!2.26e-14!57;UBERON:0007135!2.26e-14!57;UBERON:0007023!2.37e-14!115;UBERON:0002791!1.77e-13!33;UBERON:0000955!2.35e-13!69;UBERON:0006238!2.35e-13!69;UBERON:0002020!4.15e-13!34;UBERON:0003528!4.15e-13!34;UBERON:0001869!1.53e-12!32;UBERON:0002780!3.37e-12!41;UBERON:0001890!3.37e-12!41;UBERON:0006240!3.37e-12!41;UBERON:0003080!9.62e-12!42;UBERON:0002346!1.04e-10!90;UBERON:0000924!6.06e-10!173;UBERON:0006601!6.06e-10!173;UBERON:0003075!6.71e-10!86;UBERON:0007284!6.71e-10!86;UBERON:0002619!1.51e-09!22;UBERON:0000956!2.67e-09!25;UBERON:0000203!2.67e-09!25;UBERON:0004121!3.02e-09!169;UBERON:0001950!3.86e-09!20;UBERON:0000033!3.94e-08!123;UBERON:0000153!8.06e-08!129;UBERON:0007811!8.06e-08!129;UBERON:0003056!2.03e-07!61 | |ontology_enrichment_uberon=UBERON:0000073!5.69e-18!94;UBERON:0001016!5.69e-18!94;UBERON:0001017!5.38e-16!82;UBERON:0005743!1.15e-15!86;UBERON:0002616!1.20e-14!59;UBERON:0001893!2.19e-14!34;UBERON:0001049!2.26e-14!57;UBERON:0005068!2.26e-14!57;UBERON:0006241!2.26e-14!57;UBERON:0007135!2.26e-14!57;UBERON:0007023!2.37e-14!115;UBERON:0002791!1.77e-13!33;UBERON:0000955!2.35e-13!69;UBERON:0006238!2.35e-13!69;UBERON:0002020!4.15e-13!34;UBERON:0003528!4.15e-13!34;UBERON:0001869!1.53e-12!32;UBERON:0002780!3.37e-12!41;UBERON:0001890!3.37e-12!41;UBERON:0006240!3.37e-12!41;UBERON:0003080!9.62e-12!42;UBERON:0002346!1.04e-10!90;UBERON:0000924!6.06e-10!173;UBERON:0006601!6.06e-10!173;UBERON:0003075!6.71e-10!86;UBERON:0007284!6.71e-10!86;UBERON:0002619!1.51e-09!22;UBERON:0000956!2.67e-09!25;UBERON:0000203!2.67e-09!25;UBERON:0004121!3.02e-09!169;UBERON:0001950!3.86e-09!20;UBERON:0000033!3.94e-08!123;UBERON:0000153!8.06e-08!129;UBERON:0007811!8.06e-08!129;UBERON:0003056!2.03e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001736;4.27e-34;1!UBERON:0000941;4.27e-34;1!UBERON:0001785;4.27e-34;1!UBERON:0002464;4.27e-34;1!UBERON:0004904;4.27e-34;1!UBERON:0001021;4.27e-34;1!UBERON:0001897;8.34e-18;2!UBERON:0003714;8.34e-18;2!UBERON:0005162;8.34e-18;2!UBERON:0000122;8.34e-18;2!UBERON:0001829;8.34e-18;2!UBERON:0010225;8.34e-18;2!UBERON:0002365;3.90e-10;31!UBERON:0002330;3.90e-10;31!UBERON:0002784;1.38e-09;4!UBERON:0002107;5.93e-08;19!UBERON:0006925;5.93e-08;19!UBERON:0001044;8.25e-07;6!UBERON:0003293;8.25e-07;6!UBERON:0003294;8.25e-07;6!UBERON:0010047;8.25e-07;6!UBERON:0003408;8.25e-07;6!UBERON:0000167;8.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.58e-34,1;UBERON:0001785,2.58e-34,1;UBERON:0002464,2.58e-34,1;UBERON:0004904,2.58e-34,1;UBERON:0001021,2.58e-34,1;UBERON:0003902,2.58e-34,1;UBERON:0005425,2.58e-34,1;UBERON:0001736,3.61e-34,1;UBERON:0006298,3.61e-34,1;UBERON:0001897,5.48e-18,2;UBERON:0010225,5.48e-18,2;UBERON:0003714,6.48e-18,2;UBERON:0005162,6.48e-18,2;UBERON:0000122,6.48e-18,2;UBERON:0001829,7.67e-18,2;UBERON:0002365,2.52e-10,31;UBERON:0002330,2.52e-10,31;UBERON:0002784,1.12e-09,4;UBERON:0001781,1.22e-09,4;UBERON:0002107,6.36e-08,19;UBERON:0006925,6.36e-08,19;UBERON:0008836,6.36e-08,19;UBERON:0008835,5.74e-07,22;UBERON:0003894,5.74e-07,22;UBERON:0000966,7.58e-07,6;UBERON:0005388,7.58e-07,6;UBERON:0001802,7.58e-07,6;UBERON:0001044,8.02e-07,6;UBERON:0003293,8.02e-07,6;UBERON:0003294,8.02e-07,6;UBERON:0010047,8.02e-07,6;UBERON:0000167,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0.170453254832202,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0.19924798825107,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0.236387681767936,0.689486746482929,0,0,0,0.482385754501632,0,0.884634079449797,0.591095237907095,0.219385397153973,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0.326465616318295,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0.202203398942031,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0.290268993867255,0.292357268344742,0.328461828212837,0,0,0,0,0,0.443175571691151,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0.942776138467182,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0,0,0,0.121499113316049,0.335434687599266,0.0788057072991982,0,0,0.179287339332845,0,0.714695326373367,0,1.017074150619,0,0,0,0,0,0.170388021785422,0,0.146552233678082,1.32506888912221,0,0.66116300871345,0.171086837884329,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0.244052529803926,0.876336514945499,0,0.332787154610557,0.372578417648301,0.138348634936231,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.584580926518165,0.132864840313363,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0.255788742607303,0,0.157265941855896,0.218419276384028,0.33946505990805,0,0.495743057036009,0,0.318004350653419,0,0,0,0,0.256916900385838,0,0.319267718114302,0.205116364240755,0.252071696221718,0.0691572524642179,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.270150338473579,0,0.413373593002368,0.126831620387814,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.857440047187092,0.271878931907327,0.328863867814245,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0.801711364730253,0.207216164163037,0.17071847709395,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,1.37618785021362,0.573358332605805,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0.101988829741982,0,0.18378979906969,0,0.151557396436479,0.267964130156178,0,1.44806194206653,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0.665320713092027,0,0.106727345877715,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0.170453254832202,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0.19924798825107,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0.236387681767936,0.689486746482929,0,0,0,0.482385754501632,0,0.884634079449797,0.591095237907095,0.219385397153973,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0.326465616318295,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0.202203398942031,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0.290268993867255,0.292357268344742,0.328461828212837,0,0,0,0,0,0.443175571691151,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0.942776138467182,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0,0,0,0.121499113316049,0.335434687599266,0.0788057072991982,0,0,0.179287339332845,0,0.714695326373367,0,1.017074150619,0,0,0,0,0,0.170388021785422,0,0.146552233678082,1.32506888912221,0,0.66116300871345,0.171086837884329,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0.244052529803926,0.876336514945499,0,0.332787154610557,0.372578417648301,0.138348634936231,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.584580926518165,0.132864840313363,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0.255788742607303,0,0.157265941855896,0.218419276384028,0.33946505990805,0,0.495743057036009,0,0.318004350653419,0,0,0,0,0.256916900385838,0,0.319267718114302,0.205116364240755,0.252071696221718,0.0691572524642179,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.270150338473579,0,0.413373593002368,0.126831620387814,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.857440047187092,0.271878931907327,0.328863867814245,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0.801711364730253,0.207216164163037,0.17071847709395,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,1.37618785021362,0.573358332605805,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0.101988829741982,0,0.18378979906969,0,0.151557396436479,0.267964130156178,0,1.44806194206653,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0.665320713092027,0,0.106727345877715,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | ||
|short_description=p@chr11:66711224..66711227,- | |short_description=p@chr11:66711224..66711227,- | ||
}} | }} |
Latest revision as of 01:26, 24 July 2015
Short description: | p@chr11:66711224..66711227, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66711224..66711227, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.58e-34 | 1 |
cranial nerve | 2.58e-34 | 1 |
nerve trunk | 2.58e-34 | 1 |
nerve connecting eye with brain | 2.58e-34 | 1 |
nerve | 2.58e-34 | 1 |
retinal neural layer | 2.58e-34 | 1 |
presumptive neural retina | 2.58e-34 | 1 |
submandibular gland | 3.61e-34 | 1 |
submandibular gland primordium | 3.61e-34 | 1 |
dorsal plus ventral thalamus | 5.48e-18 | 2 |
thalamic complex | 5.48e-18 | 2 |
neural tissue | 6.48e-18 | 2 |
multi cell component structure | 6.48e-18 | 2 |
neuron projection bundle | 6.48e-18 | 2 |
major salivary gland | 7.67e-18 | 2 |
exocrine gland | 2.52e-10 | 31 |
exocrine system | 2.52e-10 | 31 |
regional part of diencephalon | 1.12e-09 | 4 |
layer of retina | 1.22e-09 | 4 |
liver | 6.36e-08 | 19 |
digestive gland | 6.36e-08 | 19 |
liver bud | 6.36e-08 | 19 |
hepatic diverticulum | 5.74e-07 | 22 |
liver primordium | 5.74e-07 | 22 |
retina | 7.58e-07 | 6 |
photoreceptor array | 7.58e-07 | 6 |
posterior segment of eyeball | 7.58e-07 | 6 |
saliva-secreting gland | 8.02e-07 | 6 |
gland of oral region | 8.02e-07 | 6 |
gland of foregut | 8.02e-07 | 6 |
oral gland | 8.02e-07 | 6 |
oral cavity | 8.02e-07 | 6 |