FFCP PHASE1:Hg19::chr11:62367632..62367648,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:62367632..62367648,+ | |||
|description=CAGE_peak_at_chr11:62367632..62367648,+ | |description=CAGE_peak_at_chr11:62367632..62367648,+ | ||
|id=chr11:62367632..62367648,+ | |id=chr11:62367632..62367648,+ | ||
|ontology_enrichment_celltype=CL:0000076!6.53e-19!62;CL:0002159!1.49e-13!13;CL:0000066!1.64e-13!254;CL:0002076!1.16e-12!43;CL:0000223!2.70e-09!59;CL:0000622!3.73e-09!5;CL:0002368!5.39e-09!13;CL:0000838!1.50e-07!52;CL:0000154!1.67e-07!6;CL:0002251!2.28e-07!21;CL:0000542!2.62e-07!53;CL:0000051!2.62e-07!53;CL:0000362!4.07e-07!8;CL:0000240!7.20e-07!6;CL:0000311!7.20e-07!6;CL:0000079!7.20e-07!6;CL:0000237!7.20e-07!6;CL:0000036!7.20e-07!6;CL:0000357!7.20e-07!6;CL:0000114!7.20e-07!6 | |ontology_enrichment_celltype=CL:0000076!6.53e-19!62;CL:0002159!1.49e-13!13;CL:0000066!1.64e-13!254;CL:0002076!1.16e-12!43;CL:0000223!2.70e-09!59;CL:0000622!3.73e-09!5;CL:0002368!5.39e-09!13;CL:0000838!1.50e-07!52;CL:0000154!1.67e-07!6;CL:0002251!2.28e-07!21;CL:0000542!2.62e-07!53;CL:0000051!2.62e-07!53;CL:0000362!4.07e-07!8;CL:0000240!7.20e-07!6;CL:0000311!7.20e-07!6;CL:0000079!7.20e-07!6;CL:0000237!7.20e-07!6;CL:0000036!7.20e-07!6;CL:0000357!7.20e-07!6;CL:0000114!7.20e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000622;2.07e-20;5!CL:0002623;9.64e-20;3!CL:0000154;4.79e-17;6!CL:0000150;2.02e-11;9!CL:0002251;6.60e-11;20!CL:0002076;7.98e-11;42!CL:0002368;7.01e-08;13!CL:1001319;9.43e-08;1!CL:1000600;9.43e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.23e-20,5;CL:0002623,7.74e-20,3;CL:0000154,5.11e-17,6;CL:0002076,2.46e-13,42;CL:0000150,2.11e-11,9;CL:0000223,3.74e-11,58;CL:0002251,4.91e-11,20;CL:0002368,7.01e-08,13;CL:1001319,8.84e-08,1;CL:1000600,8.84e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.43e-08;1 | |||
|ontology_enrichment_disease=DOID:1749!4.09e-17!14;DOID:0060058!5.92e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.19e-11;14!DOID:0060060;5.76e-08;1!DOID:0060061;5.76e-08;1!DOID:8691;5.76e-08;1!DOID:3151;1.91e-07;1!DOID:3149;1.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.23e-11,14;DOID:0060060,5.58e-08,1;DOID:0060061,5.58e-08,1;DOID:8691,5.58e-08,1;DOID:3151,3.17e-07,1;DOID:3149,3.17e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.41e-08!5;UBERON:0000166!2.53e-07!21;UBERON:0003343!2.85e-07!4;UBERON:0004785!2.85e-07!4 | |ontology_enrichment_uberon=UBERON:0003729!1.41e-08!5;UBERON:0000166!2.53e-07!21;UBERON:0003343!2.85e-07!4;UBERON:0004785!2.85e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000161;1.65e-11;19!UBERON:0000166;1.65e-11;19!UBERON:0002331;1.33e-10;10!UBERON:0001044;3.88e-10;6!UBERON:0003293;3.88e-10;6!UBERON:0003294;3.88e-10;6!UBERON:0010047;3.88e-10;6!UBERON:0003408;3.88e-10;6!UBERON:0000167;3.88e-10;6!UBERON:0000997;9.43e-08;1!UBERON:0004645;9.43e-08;1!UBERON:0005056;9.43e-08;1!UBERON:0004176;9.43e-08;1!UBERON:0001256;9.43e-08;1!UBERON:0001259;9.43e-08;1!UBERON:0000165;1.24e-07;28!UBERON:0003343;2.39e-07;4!UBERON:0004785;2.39e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.32e-10,10;UBERON:0000358,1.32e-10,10;UBERON:0000307,1.32e-10,10;UBERON:0000091,1.32e-10,10;UBERON:0000087,1.32e-10,10;UBERON:0007010,1.32e-10,10;UBERON:0007806,1.32e-10,10;UBERON:0008780,1.32e-10,10;UBERON:0005728,1.32e-10,10;UBERON:0001044,3.48e-10,6;UBERON:0003293,3.48e-10,6;UBERON:0003294,3.48e-10,6;UBERON:0010047,3.48e-10,6;UBERON:0000167,3.48e-10,6;UBERON:0000166,5.56e-10,22;UBERON:0000161,7.06e-08,36;UBERON:0000997,8.28e-08,1;UBERON:0005056,8.28e-08,1;UBERON:0004645,8.84e-08,1;UBERON:0001256,8.84e-08,1;UBERON:0001259,8.84e-08,1;UBERON:0003343,1.86e-07,4;UBERON:0004785,1.86e-07,4;UBERON:0000165,1.96e-07,29;UBERON:0000930,1.96e-07,29;UBERON:0001004,7.91e-07,74 | |||
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| ||
|short_description=p@chr11:62367632..62367648,+ | |short_description=p@chr11:62367632..62367648,+ | ||
}} | }} |
Latest revision as of 23:43, 23 July 2015
Short description: | p@chr11:62367632..62367648, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:62367632..62367648, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.23e-20 | 5 |
acinar cell of salivary gland | 7.74e-20 | 3 |
protein secreting cell | 5.11e-17 | 6 |
endo-epithelial cell | 2.46e-13 | 42 |
glandular epithelial cell | 2.11e-11 | 9 |
endodermal cell | 3.74e-11 | 58 |
epithelial cell of alimentary canal | 4.91e-11 | 20 |
respiratory epithelial cell | 7.01e-08 | 13 |
bladder cell | 8.84e-08 | 1 |
lower urinary tract cell | 8.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.32e-10 | 10 |
blastocyst | 1.32e-10 | 10 |
blastula | 1.32e-10 | 10 |
bilaminar disc | 1.32e-10 | 10 |
inner cell mass | 1.32e-10 | 10 |
cleaving embryo | 1.32e-10 | 10 |
connecting stalk | 1.32e-10 | 10 |
inner cell mass derived epiblast | 1.32e-10 | 10 |
extraembryonic mesoderm | 1.32e-10 | 10 |
saliva-secreting gland | 3.48e-10 | 6 |
gland of oral region | 3.48e-10 | 6 |
gland of foregut | 3.48e-10 | 6 |
oral gland | 3.48e-10 | 6 |
oral cavity | 3.48e-10 | 6 |
oral opening | 5.56e-10 | 22 |
orifice | 7.06e-08 | 36 |
mammalian vulva | 8.28e-08 | 1 |
external female genitalia | 8.28e-08 | 1 |
urinary bladder urothelium | 8.84e-08 | 1 |
wall of urinary bladder | 8.84e-08 | 1 |
mucosa of urinary bladder | 8.84e-08 | 1 |
mucosa of oral region | 1.86e-07 | 4 |
respiratory system mucosa | 1.86e-07 | 4 |
mouth | 1.96e-07 | 29 |
stomodeum | 1.96e-07 | 29 |
respiratory system | 7.91e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.23e-11 | 14 |
non-Hodgkin lymphoma | 5.58e-08 | 1 |
cutaneous T cell lymphoma | 5.58e-08 | 1 |
mycosis fungoides | 5.58e-08 | 1 |
skin squamous cell carcinoma | 3.17e-07 | 1 |
keratoacanthoma | 3.17e-07 | 1 |