FFCP PHASE1:Hg19::chr11:61486198..61486257,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:61486198..61486257,+ to FFCP PHASE1:Hg19::chr11:61486198..61486257,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:61486198..61486257,+ | |||
|description=CAGE_peak_at_chr11:61486198..61486257,+ | |||
|id=chr11:61486198..61486257,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.29e-27!180;CL:0000393!9.78e-14!60;CL:0000211!9.78e-14!60;CL:0000183!1.91e-12!59;CL:0000133!2.21e-11!59;CL:0000057!4.49e-11!75;CL:0000187!7.00e-11!54;CL:0000680!1.09e-10!57;CL:0000056!1.09e-10!57;CL:0000355!1.09e-10!57;CL:0000192!8.84e-09!42;CL:0000514!8.84e-09!42;CL:0000221!9.54e-09!71;CL:1000449!2.28e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.95e-08;15!CL:0000393;3.56e-08;61!CL:0000211;3.56e-08;61!CL:0000187;1.81e-07;55!CL:1000507;6.77e-07;10!CL:1000494;6.77e-07;10!CL:0000075;7.58e-07;27!CL:0000128;7.69e-07;7!CL:0000126;7.69e-07;7!CL:0000127;7.69e-07;7!CL:1000497;9.65e-07;17!CL:0002518;9.65e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,5.92e-15,61;CL:0000211,5.92e-15,61;CL:0000133,2.38e-13,59;CL:0000187,1.61e-11,55;CL:0000680,2.94e-10,58;CL:0000056,2.94e-10,58;CL:0000355,2.94e-10,58;CL:0000221,4.24e-09,72;CL:0000192,1.00e-08,43;CL:0000514,1.00e-08,43;CL:1000449,1.48e-08,15;CL:0000047,1.29e-07,8;CL:0000057,3.60e-07,76;CL:1000507,4.80e-07,10;CL:1000494,4.80e-07,10;CL:0000075,5.24e-07,27;CL:1000497,5.43e-07,17;CL:0002518,5.43e-07,17;CL:0000128,6.66e-07,7;CL:0000126,6.66e-07,7;CL:0000127,6.66e-07,7;CL:0002453,6.66e-07,7;CL:0002319,7.11e-07,25;CL:0002321,8.88e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000133;1.82e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.84e-21!94;UBERON:0001016!2.84e-21!94;UBERON:0005743!4.83e-20!86;UBERON:0000475!3.22e-19!365;UBERON:0003056!5.99e-19!61;UBERON:0000119!1.52e-18!312;UBERON:0001017!1.58e-18!82;UBERON:0000924!2.73e-18!173;UBERON:0006601!2.73e-18!173;UBERON:0002346!3.77e-18!90;UBERON:0000483!1.05e-17!309;UBERON:0004121!1.36e-17!169;UBERON:0003075!1.68e-17!86;UBERON:0007284!1.68e-17!86;UBERON:0001869!2.68e-16!32;UBERON:0000956!4.22e-16!25;UBERON:0000203!4.22e-16!25;UBERON:0001893!5.55e-16!34;UBERON:0000033!1.59e-15!123;UBERON:0000481!1.65e-15!347;UBERON:0002791!2.70e-15!33;UBERON:0002020!3.98e-15!34;UBERON:0003528!3.98e-15!34;UBERON:0000025!1.20e-14!194;UBERON:0002780!2.46e-14!41;UBERON:0001890!2.46e-14!41;UBERON:0006240!2.46e-14!41;UBERON:0003080!2.83e-14!42;UBERON:0000955!2.95e-14!69;UBERON:0006238!2.95e-14!69;UBERON:0002619!3.20e-14!22;UBERON:0002616!4.19e-14!59;UBERON:0000153!7.41e-14!129;UBERON:0007811!7.41e-14!129;UBERON:0001950!1.98e-13!20;UBERON:0001049!2.87e-13!57;UBERON:0005068!2.87e-13!57;UBERON:0006241!2.87e-13!57;UBERON:0007135!2.87e-13!57;UBERON:0000064!6.54e-12!219;UBERON:0000468!1.18e-11!659;UBERON:0004111!4.76e-11!241;UBERON:0000477!4.81e-11!286;UBERON:0000914!1.57e-10!83;UBERON:0002329!1.57e-10!83;UBERON:0003077!1.57e-10!83;UBERON:0003059!1.57e-10!83;UBERON:0007282!1.57e-10!83;UBERON:0009618!1.57e-10!83;UBERON:0007285!1.57e-10!83;UBERON:0004290!2.29e-10!70;UBERON:0001134!4.60e-10!61;UBERON:0002036!4.60e-10!61;UBERON:0003082!4.60e-10!61;UBERON:0005256!7.50e-10!143;UBERON:0002385!1.34e-09!63;UBERON:0001015!1.34e-09!63;UBERON:0000383!1.34e-09!63;UBERON:0000922!2.96e-09!612;UBERON:0000467!4.43e-09!625;UBERON:0000480!6.51e-09!626;UBERON:0000486!3.96e-08!82;UBERON:0002050!4.91e-08!605;UBERON:0005423!4.91e-08!605;UBERON:0004876!6.04e-08!20;UBERON:0000923!7.41e-08!604;UBERON:0005291!7.41e-08!604;UBERON:0006598!7.41e-08!604;UBERON:0002532!7.41e-08!604;UBERON:0006555!1.46e-07!17;UBERON:0005103!1.46e-07!17;UBERON:0000083!1.46e-07!17;UBERON:0009201!1.46e-07!17;UBERON:0004819!1.46e-07!17;UBERON:0006553!1.46e-07!17;UBERON:0003074!1.46e-07!17;UBERON:0003060!1.46e-07!17;UBERON:0004211!2.28e-07!16;UBERON:0001285!2.28e-07!16;UBERON:0007684!2.28e-07!16;UBERON:0003220!2.28e-07!16;UBERON:0004208!2.28e-07!16;UBERON:0000080!2.41e-07!18;UBERON:0002120!2.41e-07!18;UBERON:0004875!2.41e-07!18;UBERON:0005721!2.41e-07!18;UBERON:0005754!2.41e-07!18;UBERON:0007297!2.41e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.55e-20;25!UBERON:0000203;3.55e-20;25!UBERON:0002619;8.20e-18;22!UBERON:0001950;8.41e-17;20!UBERON:0001869;1.93e-15;32!UBERON:0002791;8.80e-14;32!UBERON:0001893;1.56e-13;34!UBERON:0003528;1.62e-12;34!UBERON:0002020;1.62e-12;34!UBERON:0002780;4.32e-09;41!UBERON:0001890;4.32e-09;41!UBERON:0006555;2.95e-08;15!UBERON:0004819;2.95e-08;15!UBERON:0001285;2.95e-08;15!UBERON:0007684;2.95e-08;15!UBERON:0004211;6.77e-07;10!UBERON:0009773;6.77e-07;10!UBERON:0001231;6.77e-07;10!UBERON:0004810;6.77e-07;10 | |||
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|phase1_expression=0.363356758541113,0.214100523890983,0.845726424575827,0,0,0,0,0,0,5.89761447603621,9.76921635161399,3.27662058195258,2.90143676051299,0.247532705920093,0,1.34465029290355,0,2.19093027116212,1.46379839637152,5.41732655537867,5.50801866359483,2.82109249330279,5.72471974262113,4.79060487755095,6.02604670055053,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.02290049474824,1.44575660953827,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,4.53767122387526,3.99112915432615,4.56740885604255,2.48860243445654,0.728590576585084,0.370784442784429,0.97364218096405,0.696518949197069,0.797747763113191,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.838998872419812,0,0,0,0,0.33472061276467,0,0,0,0,0,0.357198913136319,0.898117490504679,0.788280363383256,1.53316637465883,2.84779697870439,0.183201743930407,0,0,0,0.496971951695318,1.51956613997496,1.98613771219828,2.0078563452417,0.709336764396714,6.16745360156538,1.06748995729705,2.22000793575444,0.311211035399766,0.134710672069688,0.490385709340376,0.756787138224657,0.576175924479999,1.87457145467037,0.936480230490962,0.570471821544449,0.448346041655403,1.40921398372518,1.45685649931318,1.26405726032024,0.408308342509787,2.45668634623536,0.206651562351531,4.75201142912821,1.7308685049499,0.910161361938026,2.15585442544872,0.841680569770331,2.25213335769535,0.554128230968366,3.07284334616587,2.14541457059314,2.10333282469236,1.02088964844019,4.66413052791041,1.06778694409284,0.847727604638247,3.90118424909723,1.8549455262919,3.34932702059318,1.11670113798954,2.70042131586026,1.16924406193438,3.78650661366172,1.56484827691909,1.61646056818812,3.55009592516614,1.20902517873168,3.22165125389926,0,0.545492241181669,0,0.853815942907168,1.06023814657188,1.97529702878181,3.00617059544574,3.28017106138317,2.18986415445498,1.56449532329816,0.643240938192885,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0.738155454624648,5.60967095213783,5.7620361586396,2.94017422771084,0,0,1.18157981336281,0,0,1.02940686179115,0,0,0,0.370353780634118,3.9096996637239,1.03993478527958,2.88662684050547,1.73895607462615,1.05667824812239,0,0,0,0,0,0,4.44608103764552,0.743155811443641,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0.126995788584338,0,4.68869788840188,1.71072446022705,0.925447434329912,3.90445975197093,2.00078502841405,3.47606361470618,2.61576041299968,1.24675085895615,1.55126058909333,0,0.845302752556,2.12750493267896,2.08014873822732,4.62973273671856,0,1.8649552531127,1.28680194292333,2.71310802695722,2.46972101034231,1.62868092146868,1.06617584622764,0,2.41151501647669,0.871533458600294,3.29910870900788,0,0,0,1.4377491329495,4.59447743336456,1.42636905040718,0.434343920002738,0.410952645100767,0.537182889719687,0,0,0,0,8.13102797511883,19.5209780786433,3.86644406388848,7.70574820538004,8.29320377149112,0,0,0,0.736148950314839,0.500170521059677,1.35632511849868,1.45579603071565,1.07057393278297,1.73472656537328,1.99140405487612,0.902838299183157,0,1.03473071292505,2.65690239414175,3.68738337083406,1.91143951829782,1.56640925970192,1.71571711905428,0,0,0,2.72814814301633,11.6504807657348,4.5358543999452,0.248107807818777,0.460385919864187,0.561320188866147,1.02511319404561,0,1.28683136914886,1.48418066444991,2.31314540703983,0.887808626565635,2.13530605635904,1.55776328755086,2.09178681227927,0,0,0.276242966807689,2.18147451512753,1.27463817604702,1.96686622439136,4.96319574198153,2.69553679865452,17.2556949218908,10.2297457257282,4.11651352682215,3.4120015221269,0.680374821106063,1.94324324491925,4.62681758070868,10.2959646266664,9.53210570324221,1.78413391131527,0,8.50724067944278,0,0,1.53870075069834,5.9042636225947,3.57916234130733,0,0,0,0.574265537996172,0,3.21367859688319,2.32009723901093,2.46477787383431,2.76306614507033,2.34322173223702,1.39646318328756,1.45016693914229,2.81247870473133,1.4245125703478,0,0.192190067365106,1.27612712494584,0.2023155617111,1.39453664789186,1.25924938732256,1.3940745403212,1.84820148105653,1.59691809095107,1.73986598415015,0.55597265731176,0.143124886741991,0.744316738719335,2.53103539774981,1.33441135746677,3.58256907835867,0.855877976067841,2.86382923133343,2.35484592059769,1.2591072030832,1.92175920815238,2.47406044925942,1.01091240786658,0,1.68503382495592,9.26504104270222,0.487426979262569,0,1.9109987597118,1.1312434556297,3.39024349860728,3.85955740482287,1.32687795048244,1.75380354101505,2.89387767133344,0.655894752046633,2.43492452355245,2.16876448669825,4.50712964051586,2.15117028306077,1.47373561519682,2.85336841185,4.25713276884717,0.211107635297664,0.329294892959902,6.83051712778287,3.84928192269481,0,0.670302275535787,2.17781969722645,0.188287601553558,0,1.68471475667626,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0.79312517629427,0.21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| ||
|short_description=p@chr11:61486198..61486257,+ | |||
}} | }} |
Latest revision as of 23:28, 23 July 2015
Short description: | p@chr11:61486198..61486257, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:61486198..61486257, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 5.92e-15 | 61 |
electrically active cell | 5.92e-15 | 61 |
neurectodermal cell | 2.38e-13 | 59 |
muscle cell | 1.61e-11 | 55 |
muscle precursor cell | 2.94e-10 | 58 |
myoblast | 2.94e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.94e-10 | 58 |
ectodermal cell | 4.24e-09 | 72 |
smooth muscle cell | 1.00e-08 | 43 |
smooth muscle myoblast | 1.00e-08 | 43 |
epithelial cell of nephron | 1.48e-08 | 15 |
neuronal stem cell | 1.29e-07 | 8 |
fibroblast | 3.60e-07 | 76 |
kidney tubule cell | 4.80e-07 | 10 |
nephron tubule epithelial cell | 4.80e-07 | 10 |
columnar/cuboidal epithelial cell | 5.24e-07 | 27 |
kidney cell | 5.43e-07 | 17 |
kidney epithelial cell | 5.43e-07 | 17 |
oligodendrocyte | 6.66e-07 | 7 |
macroglial cell | 6.66e-07 | 7 |
astrocyte | 6.66e-07 | 7 |
oligodendrocyte precursor cell | 6.66e-07 | 7 |
neural cell | 7.11e-07 | 25 |
embryonic cell | 8.88e-07 | 250 |