FFCP PHASE1:Hg19::chr11:61280885..61280904,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:61280885..61280904,- | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_at_chr11:61280885..61280904,- | |description=CAGE_peak_at_chr11:61280885..61280904,- | ||
|id=chr11:61280885..61280904,- | |id=chr11:61280885..61280904,- | ||
|ontology_enrichment_celltype=CL:0000039!3.70e-14!7;CL:0000586!3.70e-14!7;CL:0000313!3.62e-07!1 | |ontology_enrichment_celltype=CL:0000039!3.70e-14!7;CL:0000586!3.70e-14!7;CL:0000313!3.62e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000322;3.06e-12;3!CL:0000082;6.82e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.24e-12,3;CL:0000082,6.82e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.48e-18;2 | |||
|ontology_enrichment_disease=DOID:5093!3.10e-15!4;DOID:1612!3.10e-15!4;DOID:1799!9.71e-08!1;DOID:10165!9.71e-08!1;DOID:1798!9.71e-08!1;DOID:0050619!1.03e-07!1;DOID:1357!1.03e-07!1;DOID:2152!3.62e-07!1 | |ontology_enrichment_disease=DOID:5093!3.10e-15!4;DOID:1612!3.10e-15!4;DOID:1799!9.71e-08!1;DOID:10165!9.71e-08!1;DOID:1798!9.71e-08!1;DOID:0050619!1.03e-07!1;DOID:1357!1.03e-07!1;DOID:2152!3.62e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.58e-74;4!DOID:1612;2.58e-74;4!DOID:1325;1.15e-19;7!DOID:3904;1.15e-19;7!DOID:3910;1.17e-17;2!DOID:3905;1.52e-15;9!DOID:299;1.13e-12;25!DOID:1324;9.66e-10;15!DOID:5409;1.63e-09;4!DOID:0050615;3.41e-09;16!DOID:3908;7.25e-08;5!DOID:305;2.31e-07;106!DOID:7;7.37e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.58e-74,4;DOID:1612,2.58e-74,4;DOID:1325,1.15e-19,7;DOID:3904,1.15e-19,7;DOID:3910,1.27e-17,2;DOID:3905,1.52e-15,9;DOID:299,1.13e-12,25;DOID:1324,9.66e-10,15;DOID:5409,1.57e-09,4;DOID:0050615,3.41e-09,16;DOID:7,2.18e-08,39;DOID:305,3.25e-08,106;DOID:3908,7.49e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003135!5.09e-20!11;UBERON:0000473!1.14e-12!8;UBERON:0003101!9.85e-10!22;UBERON:0000079!9.85e-10!22;UBERON:0000974!1.25e-09!10;UBERON:0006947!1.90e-09!3;UBERON:0004054!1.90e-09!3;UBERON:0003133!5.15e-09!48;UBERON:0001301!6.59e-08!1;UBERON:0001764!1.03e-07!1;UBERON:0001825!1.03e-07!1;UBERON:0001000!1.61e-07!1;UBERON:0005352!1.61e-07!1;UBERON:0005904!2.75e-07!4;UBERON:0004911!3.62e-07!1;UBERON:0000991!3.95e-07!21;UBERON:0009196!3.95e-07!21;UBERON:0009117!3.95e-07!21;UBERON:0005564!3.95e-07!21;UBERON:0005156!4.60e-07!59;UBERON:0000990!4.60e-07!59;UBERON:0003343!7.95e-07!4;UBERON:0004785!7.95e-07!4;UBERON:0004176!8.56e-07!22 | |ontology_enrichment_uberon=UBERON:0003135!5.09e-20!11;UBERON:0000473!1.14e-12!8;UBERON:0003101!9.85e-10!22;UBERON:0000079!9.85e-10!22;UBERON:0000974!1.25e-09!10;UBERON:0006947!1.90e-09!3;UBERON:0004054!1.90e-09!3;UBERON:0003133!5.15e-09!48;UBERON:0001301!6.59e-08!1;UBERON:0001764!1.03e-07!1;UBERON:0001825!1.03e-07!1;UBERON:0001000!1.61e-07!1;UBERON:0005352!1.61e-07!1;UBERON:0005904!2.75e-07!4;UBERON:0004911!3.62e-07!1;UBERON:0000991!3.95e-07!21;UBERON:0009196!3.95e-07!21;UBERON:0009117!3.95e-07!21;UBERON:0005564!3.95e-07!21;UBERON:0005156!4.60e-07!59;UBERON:0000990!4.60e-07!59;UBERON:0003343!7.95e-07!4;UBERON:0004785!7.95e-07!4;UBERON:0004176!8.56e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.84e-34;1!UBERON:0000310;2.27e-30;10!UBERON:0001443;1.07e-27;11!UBERON:0004903;1.17e-17;2!UBERON:0002173;1.17e-17;2!UBERON:0002186;1.17e-17;2!UBERON:0000058;3.14e-14;10!UBERON:0000915;5.10e-13;52!UBERON:0006947;1.85e-12;3!UBERON:0004054;1.85e-12;3!UBERON:0004821;3.06e-12;3!UBERON:0007499;3.06e-12;3!UBERON:0003215;3.06e-12;3!UBERON:0010368;3.06e-12;3!UBERON:0009911;3.06e-12;3!UBERON:0002299;3.06e-12;3!UBERON:0006524;3.06e-12;3!UBERON:0008874;3.06e-12;3!UBERON:0002169;3.06e-12;3!UBERON:0004894;3.06e-12;3!UBERON:0005904;1.12e-09;4!UBERON:0009856;1.63e-09;4!UBERON:0004802;6.82e-08;19!UBERON:0000115;6.82e-08;19!UBERON:0002048;6.09e-07;22!UBERON:0004807;6.09e-07;22!UBERON:0000117;6.09e-07;22!UBERON:0000171;6.09e-07;22!UBERON:0000170;6.09e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.84e-34,1;UBERON:0000310,2.27e-30,10;UBERON:0001443,1.07e-27,11;UBERON:0004903,1.27e-17,2;UBERON:0002173,1.27e-17,2;UBERON:0002186,1.27e-17,2;UBERON:0000915,2.78e-16,52;UBERON:0006947,1.85e-12,3;UBERON:0004054,1.85e-12,3;UBERON:0004821,3.24e-12,3;UBERON:0003215,3.24e-12,3;UBERON:0010368,3.24e-12,3;UBERON:0009911,3.24e-12,3;UBERON:0002299,3.24e-12,3;UBERON:0006524,3.24e-12,3;UBERON:0008874,3.24e-12,3;UBERON:0002169,3.24e-12,3;UBERON:0004894,3.24e-12,3;UBERON:0009569,4.95e-11,112;UBERON:0005904,1.12e-09,4;UBERON:0000058,5.94e-08,19;UBERON:0004802,6.82e-08,19;UBERON:0000115,6.82e-08,19;UBERON:0002048,6.09e-07,22;UBERON:0000117,6.09e-07,22;UBERON:0000171,6.09e-07,22;UBERON:0000170,6.09e-07,22;UBERON:0005597,6.09e-07,22;UBERON:0000118,6.09e-07,22 | |||
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|short_description=p@chr11:61280885..61280904,- | |short_description=p@chr11:61280885..61280904,- | ||
}} | }} |
Latest revision as of 23:26, 23 July 2015
Short description: | p@chr11:61280885..61280904, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:61280885..61280904, - |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.24e-12 | 3 |
epithelial cell of lung | 6.82e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.84e-34 | 1 |
breast | 2.27e-30 | 10 |
chest | 1.07e-27 | 11 |
bronchoalveolar duct junction | 1.27e-17 | 2 |
alveolar duct | 1.27e-17 | 2 |
bronchiole | 1.27e-17 | 2 |
thoracic segment of trunk | 2.78e-16 | 52 |
male genital duct | 1.85e-12 | 3 |
internal male genitalia | 1.85e-12 | 3 |
pulmonary alveolus epithelium | 3.24e-12 | 3 |
alveolus | 3.24e-12 | 3 |
pulmonary lobule | 3.24e-12 | 3 |
lobule | 3.24e-12 | 3 |
alveolus of lung | 3.24e-12 | 3 |
alveolar system | 3.24e-12 | 3 |
pulmonary acinus | 3.24e-12 | 3 |
alveolar sac | 3.24e-12 | 3 |
alveolar wall | 3.24e-12 | 3 |
subdivision of trunk | 4.95e-11 | 112 |
duct of male reproductive system | 1.12e-09 | 4 |
duct | 5.94e-08 | 19 |
respiratory tract epithelium | 6.82e-08 | 19 |
lung epithelium | 6.82e-08 | 19 |
lung | 6.09e-07 | 22 |
respiratory tube | 6.09e-07 | 22 |
respiration organ | 6.09e-07 | 22 |
pair of lungs | 6.09e-07 | 22 |
lung primordium | 6.09e-07 | 22 |
lung bud | 6.09e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.58e-74 | 4 |
breast cancer | 2.58e-74 | 4 |
bronchus cancer | 1.15e-19 | 7 |
bronchogenic carcinoma | 1.15e-19 | 7 |
lung adenocarcinoma | 1.27e-17 | 2 |
lung carcinoma | 1.52e-15 | 9 |
adenocarcinoma | 1.13e-12 | 25 |
lung cancer | 9.66e-10 | 15 |
lung small cell carcinoma | 1.57e-09 | 4 |
respiratory system cancer | 3.41e-09 | 16 |
disease of anatomical entity | 2.18e-08 | 39 |
carcinoma | 3.25e-08 | 106 |
non-small cell lung carcinoma | 7.49e-08 | 5 |