FFCP PHASE1:Hg19::chr11:60797413..60797441,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:60797413..60797441,-
|short_description=p@chr11:60797413..60797441,-
|description=CAGE_peak_at_chr11:60797413..60797441,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:60797413..60797441,- | |||
|description=CAGE_peak_at_chr11:60797413..60797441,- | |||
|id=chr11:60797413..60797441,- | |||
|ontology_enrichment_celltype=CL:0000738!7.33e-38!140;CL:0002087!2.12e-35!119;CL:0002031!2.29e-33!124;CL:0002032!6.92e-33!165;CL:0000837!6.92e-33!165;CL:0000037!7.20e-32!172;CL:0000566!7.20e-32!172;CL:0000988!3.22e-30!182;CL:0002057!1.03e-21!42;CL:0000860!9.82e-20!45;CL:0000542!1.14e-18!53;CL:0000051!1.14e-18!53;CL:0000838!1.98e-17!52;CL:0002009!3.42e-17!65;CL:0002194!1.89e-16!63;CL:0000576!1.89e-16!63;CL:0000040!1.89e-16!63;CL:0000559!1.89e-16!63;CL:0000557!3.42e-16!71;CL:0000766!1.24e-15!76;CL:0000839!3.98e-15!70;CL:0000763!7.24e-15!112;CL:0000049!7.24e-15!112;CL:0000945!1.47e-09!24;CL:0000826!1.47e-09!24;CL:0000084!7.83e-08!25;CL:0000827!7.83e-08!25;CL:0000453!2.86e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.11e-27;5!CL:0000860;2.58e-17;33!CL:0002057;2.58e-17;33!CL:0000990;1.70e-15;8!CL:0000473;2.84e-14;39!CL:0000234;2.84e-14;39!CL:0000451;1.03e-12;10!CL:0000946;1.76e-09;1!CL:0000786;1.76e-09;1!CL:0000576;3.32e-07;48!CL:0002087;3.73e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,7.39e-28,5;CL:0000738,6.91e-19,136;CL:0000990,1.36e-15,8;CL:0002032,1.80e-15,161;CL:0000837,1.80e-15,161;CL:0000037,1.08e-14,168;CL:0000860,1.22e-14,42;CL:0002057,1.22e-14,42;CL:0000988,8.74e-14,177;CL:0002087,1.66e-13,115;CL:0002031,7.27e-13,120;CL:0000451,8.60e-13,10;CL:0000473,1.19e-12,48;CL:0000234,1.19e-12,48;CL:0002009,7.98e-12,61;CL:0000763,1.02e-10,108;CL:0000049,1.02e-10,108;CL:0000557,1.21e-10,67;CL:0002194,7.32e-10,59;CL:0000576,7.32e-10,59;CL:0000040,7.32e-10,59;CL:0000559,7.32e-10,59;CL:0000946,2.46e-09,1;CL:0000786,2.46e-09,1;CL:0000980,2.46e-09,1;CL:0000839,1.07e-08,66;CL:0000766,7.10e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-11;42 | |||
|ontology_enrichment_disease=DOID:0060058!1.29e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:0060060;7.49e-10;1!DOID:0060061;7.49e-10;1!DOID:12603;7.49e-10;1!DOID:8691;7.49e-10;1!DOID:630;1.76e-09;1!DOID:0050177;1.76e-09;1!DOID:0050427;1.76e-09;1!DOID:0060058;3.64e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.50e-10,1;DOID:0060061,7.50e-10,1;DOID:8691,7.50e-10,1;DOID:12603,8.91e-10,1;DOID:630,1.15e-09,1;DOID:0050177,1.15e-09,1;DOID:0050427,1.15e-09,1;DOID:0060058,3.55e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.24e-14!102;UBERON:0003061!9.24e-14!102;UBERON:0002371!2.22e-13!80;UBERON:0002193!2.09e-12!112;UBERON:0001474!7.56e-12!86;UBERON:0002405!3.13e-10!115;UBERON:0004765!1.28e-09!101;UBERON:0001434!1.28e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.22e-09,76;UBERON:0002405,7.34e-09,93;UBERON:0001474,1.93e-08,82;UBERON:0002390,2.53e-08,98;UBERON:0003061,2.53e-08,98;UBERON:0004765,1.46e-07,90;UBERON:0002193,2.14e-07,108 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.492603536699674,0.236132343941038,0.393364276848904,0.383829398097213,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0.755751887377619,0.485168122375632,0.464858073811369,1.23350366406548,0.929119112685311,0.28769239232215,0.256160706529101,0,1.72372840368309,2.5819387343353,2.70852973188684,0.188242339542605,0.545812300115692,0,0.612167784741805,0.641858054152187,1.27867425159808,0,0,0,2.03146467040009,1.13477044938228,1.86846674698672,0,0,0,0.605399502633369,2.20966581592539,0.949387162322653,0.211255286311942,0.212604299965044,0.209658645508376,0,0.300353785683013,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.822405995998037,0,0,0,0,1.55974639639243,0.294605907474837,0.443067789167242,0.812411591295047,1.0247305578054,1.8208308658383,0.657751618414705,0.552700035571697,0,0.296573126324121,0,0,0.906474741580529,0,0,2.02415753615602,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04383492638291,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,4.94411622680279,0,0,0,0.503865495708552,0,0.369254416383208,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.91227394607833,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.83507121126218,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,2.92466059016951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0.704815022316672,0,0,0,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70234586794838,2.65729680626726,3.92556946214026,0,0.245772908753719,0,2.39984875025916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,1.69899965072379,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0.244209805832924,0,0,0,0,0,0,0,0,1.9234109538194 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.492603536699674,0.236132343941038,0.393364276848904,0.383829398097213,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0.755751887377619,0.485168122375632,0.464858073811369,1.23350366406548,0.929119112685311,0.28769239232215,0.256160706529101,0,1.72372840368309,2.5819387343353,2.70852973188684,0.188242339542605,0.545812300115692,0,0.612167784741805,0.641858054152187,1.27867425159808,0,0,0,2.03146467040009,1.13477044938228,1.86846674698672,0,0,0,0.605399502633369,2.20966581592539,0.949387162322653,0.211255286311942,0.212604299965044,0.209658645508376,0,0.300353785683013,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.822405995998037,0,0,0,0,1.55974639639243,0.294605907474837,0.443067789167242,0.812411591295047,1.0247305578054,1.8208308658383,0.657751618414705,0.552700035571697,0,0.296573126324121,0,0,0.906474741580529,0,0,2.02415753615602,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04383492638291,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,4.94411622680279,0,0,0,0.503865495708552,0,0.369254416383208,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.91227394607833,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.83507121126218,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,2.92466059016951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0.704815022316672,0,0,0,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70234586794838,2.65729680626726,3.92556946214026,0,0.245772908753719,0,2.39984875025916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,1.69899965072379,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0.244209805832924,0,0,0,0,0,0,0,0,1.9234109538194 | ||
|short_description=p@chr11:60797413..60797441,- | |||
}} | }} |
Latest revision as of 23:20, 23 July 2015
Short description: | p@chr11:60797413..60797441, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60797413..60797441, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 7.39e-28 | 5 |
leukocyte | 6.91e-19 | 136 |
conventional dendritic cell | 1.36e-15 | 8 |
hematopoietic oligopotent progenitor cell | 1.80e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-15 | 161 |
hematopoietic stem cell | 1.08e-14 | 168 |
classical monocyte | 1.22e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.22e-14 | 42 |
hematopoietic cell | 8.74e-14 | 177 |
nongranular leukocyte | 1.66e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 7.27e-13 | 120 |
dendritic cell | 8.60e-13 | 10 |
defensive cell | 1.19e-12 | 48 |
phagocyte | 1.19e-12 | 48 |
macrophage dendritic cell progenitor | 7.98e-12 | 61 |
myeloid cell | 1.02e-10 | 108 |
common myeloid progenitor | 1.02e-10 | 108 |
granulocyte monocyte progenitor cell | 1.21e-10 | 67 |
monopoietic cell | 7.32e-10 | 59 |
monocyte | 7.32e-10 | 59 |
monoblast | 7.32e-10 | 59 |
promonocyte | 7.32e-10 | 59 |
antibody secreting cell | 2.46e-09 | 1 |
plasma cell | 2.46e-09 | 1 |
plasmablast | 2.46e-09 | 1 |
myeloid lineage restricted progenitor cell | 1.07e-08 | 66 |
myeloid leukocyte | 7.10e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.22e-09 | 76 |
immune system | 7.34e-09 | 93 |
bone element | 1.93e-08 | 82 |
hematopoietic system | 2.53e-08 | 98 |
blood island | 2.53e-08 | 98 |
skeletal element | 1.46e-07 | 90 |
hemolymphoid system | 2.14e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.50e-10 | 1 |
cutaneous T cell lymphoma | 7.50e-10 | 1 |
mycosis fungoides | 7.50e-10 | 1 |
acute leukemia | 8.91e-10 | 1 |
genetic disease | 1.15e-09 | 1 |
monogenic disease | 1.15e-09 | 1 |
xeroderma pigmentosum | 1.15e-09 | 1 |
lymphoma | 3.55e-08 | 10 |