FFCP PHASE1:Hg19::chr11:60680190..60680212,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:60680190..60680212,+ | |||
|coexpression_cluster_id=C1144 | |||
|description=CAGE_peak_at_chr11:60680190..60680212,+ | |description=CAGE_peak_at_chr11:60680190..60680212,+ | ||
|id=chr11:60680190..60680212,+ | |id=chr11:60680190..60680212,+ | ||
|ontology_enrichment_celltype=CL:0000708!1.34e-12!3;CL:0000064!1.37e-11!3;CL:0005012!1.37e-11!3;CL:0000067!1.37e-11!3;CL:0002304!1.37e-11!3;CL:0002575!5.42e-09!2;CL:0002549!6.08e-09!2;CL:0002322!6.78e-07!5 | |ontology_enrichment_celltype=CL:0000708!1.34e-12!3;CL:0000064!1.37e-11!3;CL:0005012!1.37e-11!3;CL:0000067!1.37e-11!3;CL:0002304!1.37e-11!3;CL:0002575!5.42e-09!2;CL:0002549!6.08e-09!2;CL:0002322!6.78e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002575;9.78e-45;2!CL:0002549;2.39e-44;2!CL:0000708;1.09e-30;3!CL:0000669;5.75e-23;4!CL:0000327;6.40e-07;15!CL:0000306;9.10e-07;4!CL:0002222;9.10e-07;4!CL:0002224;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,7.83e-45,2;CL:0002549,1.53e-44,2;CL:0000708,1.09e-30,3;CL:0000669,5.14e-23,4;CL:0000327,6.40e-07,15;CL:0000306,9.63e-07,4;CL:0002222,9.63e-07,4;CL:0002224,9.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.09e-23;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;9.10e-07;4 | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr11:60680190..60680212,+ | |short_description=p@chr11:60680190..60680212,+ | ||
}} | }} |
Latest revision as of 23:18, 23 July 2015
Short description: | p@chr11:60680190..60680212, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60680190..60680212, + |
Coexpression cluster: | C1144_Meningeal_Fibroblast_mesenchymal_ductal_Smooth_Preadipocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 7.83e-45 | 2 |
fibroblast of choroid plexus | 1.53e-44 | 2 |
leptomeningeal cell | 1.09e-30 | 3 |
pericyte cell | 5.14e-23 | 4 |
extracellular matrix secreting cell | 6.40e-07 | 15 |
crystallin accumulating cell | 9.63e-07 | 4 |
vertebrate lens cell | 9.63e-07 | 4 |
lens epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.53e-44 | 2 |
ventricle of nervous system | 1.53e-44 | 2 |
choroid plexus | 1.53e-44 | 2 |
brain ventricle | 1.53e-44 | 2 |
ventricular system of brain | 1.53e-44 | 2 |
ventricular system of central nervous system | 1.53e-44 | 2 |
blood-cerebrospinal fluid barrier | 1.09e-30 | 3 |
parotid gland | 2.10e-23 | 1 |
cheek | 2.10e-23 | 1 |
parotid gland primordium | 2.10e-23 | 1 |
brain vasculature | 1.62e-18 | 5 |
major salivary gland | 2.07e-12 | 2 |
midface | 2.07e-12 | 2 |
vasculature of organ | 5.87e-09 | 11 |
cuboidal epithelium | 9.63e-07 | 4 |
transparent eye structure | 9.63e-07 | 4 |
simple cuboidal epithelium | 9.63e-07 | 4 |
cranial placode | 9.63e-07 | 4 |
lens of camera-type eye | 9.63e-07 | 4 |
epithelium of lens | 9.63e-07 | 4 |
lens placode | 9.63e-07 | 4 |
lens vesicle | 9.63e-07 | 4 |