FFCP PHASE1:Hg19::chr11:60145332..60145348,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:60145332..60145348,- | |||
|coexpression_cluster_id=C883 | |||
|description=CAGE_peak_at_chr11:60145332..60145348,- | |description=CAGE_peak_at_chr11:60145332..60145348,- | ||
|id=chr11:60145332..60145348,- | |id=chr11:60145332..60145348,- | ||
|ontology_enrichment_celltype=CL:0002057!6.85e-97!42;CL:0000860!1.01e-89!45;CL:0002009!1.40e-74!65;CL:0002194!1.22e-73!63;CL:0000576!1.22e-73!63;CL:0000040!1.22e-73!63;CL:0000559!1.22e-73!63;CL:0000766!1.65e-69!76;CL:0000557!2.13e-67!71;CL:0000839!2.95e-65!70;CL:0002087!9.98e-56!119;CL:0000738!1.80e-54!140;CL:0000763!3.98e-50!112;CL:0000049!3.98e-50!112;CL:0002031!4.62e-48!124;CL:0000037!2.67e-47!172;CL:0000566!2.67e-47!172;CL:0000988!5.89e-44!182;CL:0002032!5.89e-42!165;CL:0000837!5.89e-42!165;CL:0002393!1.28e-27!9;CL:0002397!1.28e-27!9;CL:0000134!1.33e-15!358;CL:0002320!4.85e-15!365;CL:0000219!4.63e-13!390;CL:0000048!1.06e-10!430;CL:0000034!1.38e-10!444;CL:0000723!2.30e-10!436;CL:0000767!2.36e-10!3;CL:0000875!2.58e-10!3;CL:0002396!2.58e-10!3;CL:0000842!7.24e-10!3;CL:0000224!1.73e-07!4 | |ontology_enrichment_celltype=CL:0002057!6.85e-97!42;CL:0000860!1.01e-89!45;CL:0002009!1.40e-74!65;CL:0002194!1.22e-73!63;CL:0000576!1.22e-73!63;CL:0000040!1.22e-73!63;CL:0000559!1.22e-73!63;CL:0000766!1.65e-69!76;CL:0000557!2.13e-67!71;CL:0000839!2.95e-65!70;CL:0002087!9.98e-56!119;CL:0000738!1.80e-54!140;CL:0000763!3.98e-50!112;CL:0000049!3.98e-50!112;CL:0002031!4.62e-48!124;CL:0000037!2.67e-47!172;CL:0000566!2.67e-47!172;CL:0000988!5.89e-44!182;CL:0002032!5.89e-42!165;CL:0000837!5.89e-42!165;CL:0002393!1.28e-27!9;CL:0002397!1.28e-27!9;CL:0000134!1.33e-15!358;CL:0002320!4.85e-15!365;CL:0000219!4.63e-13!390;CL:0000048!1.06e-10!430;CL:0000034!1.38e-10!444;CL:0000723!2.30e-10!436;CL:0000767!2.36e-10!3;CL:0000875!2.58e-10!3;CL:0002396!2.58e-10!3;CL:0000842!7.24e-10!3;CL:0000224!1.73e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000576;5.85e-49;48!CL:0000860;1.17e-46;33!CL:0002057;1.17e-46;33!CL:0002393;7.85e-38;6!CL:0002397;7.85e-38;6!CL:0000766;9.41e-34;69!CL:0000473;4.40e-32;39!CL:0000234;4.40e-32;39!CL:0000767;1.60e-19;3!CL:0000875;1.94e-19;3!CL:0002396;1.94e-19;3!CL:0000226;8.99e-19;3!CL:0000842;8.99e-19;3!CL:0002087;4.54e-16;104!CL:0000763;7.05e-15;100!CL:0000738;8.33e-10;136!CL:0000988;2.49e-08;177!CL:0000094;1.23e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.76e-96,42;CL:0002057,1.76e-96,42;CL:0000473,7.86e-84,48;CL:0000234,7.86e-84,48;CL:0000766,1.50e-67,72;CL:0002194,4.12e-66,59;CL:0000576,4.12e-66,59;CL:0000040,4.12e-66,59;CL:0000559,4.12e-66,59;CL:0002009,7.98e-64,61;CL:0000839,1.06e-58,66;CL:0000557,9.07e-58,67;CL:0002393,1.23e-55,9;CL:0002397,1.23e-55,9;CL:0000763,1.43e-43,108;CL:0000049,1.43e-43,108;CL:0000738,9.29e-42,136;CL:0002087,2.24e-40,115;CL:0000037,7.32e-33,168;CL:0000988,6.20e-31,177;CL:0002031,2.52e-30,120;CL:0002032,1.26e-27,161;CL:0000837,1.26e-27,161;CL:0000767,9.98e-20,3;CL:0000875,1.21e-19,3;CL:0002396,1.21e-19,3;CL:0000226,1.02e-18,3;CL:0000842,1.02e-18,3;CL:0000134,8.31e-13,354;CL:0002320,1.88e-12,361;CL:0000219,3.37e-11,386;CL:0000048,1.15e-09,427;CL:0000723,1.88e-09,433;CL:0000034,3.54e-09,441;CL:0000094,1.04e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.04e-65;42!CL:0000049;4.30e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.44e-61!80;UBERON:0002390!1.86e-61!102;UBERON:0003061!1.86e-61!102;UBERON:0001474!1.64e-56!86;UBERON:0002193!6.84e-55!112;UBERON:0004765!1.76e-46!101;UBERON:0001434!1.76e-46!101;UBERON:0002405!1.83e-39!115;UBERON:0002204!1.10e-23!167;UBERON:0003081!1.57e-22!216;UBERON:0002384!2.83e-14!375 | |ontology_enrichment_uberon=UBERON:0002371!1.44e-61!80;UBERON:0002390!1.86e-61!102;UBERON:0003061!1.86e-61!102;UBERON:0001474!1.64e-56!86;UBERON:0002193!6.84e-55!112;UBERON:0004765!1.76e-46!101;UBERON:0001434!1.76e-46!101;UBERON:0002405!1.83e-39!115;UBERON:0002204!1.10e-23!167;UBERON:0003081!1.57e-22!216;UBERON:0002384!2.83e-14!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.88e-50,76;UBERON:0002390,3.48e-48,98;UBERON:0003061,3.48e-48,98;UBERON:0001474,1.87e-46,82;UBERON:0002193,2.69e-43,108;UBERON:0004765,6.09e-42,90;UBERON:0002405,1.90e-40,93;UBERON:0001434,2.64e-37,100;UBERON:0003081,1.03e-20,203;UBERON:0002204,1.90e-20,167;UBERON:0002384,5.75e-12,371;UBERON:0000926,1.81e-11,315;UBERON:0004120,1.81e-11,315;UBERON:0006603,1.81e-11,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,4.98978217526377,2.16742572642506,0,0,0,0,0,0.293600439334847,1.66198622559563,9.6261334785668,2.17010870715852,0.223915474239924,0,0,2.03557534291391,0,0.485168122375632,6.97287110717054,0.411167888021826,0.929119112685311,2.01384674625505,0.512321413058201,1.18241114944293,5.5159308917859,0.645484683583826,0,2.63539275359647,0.272906150057846,2.02251136000576,6.73384563215986,0.320929027076094,1.91801137739712,0.329851300186716,0.398927315243264,1.70489900213078,5.22376629531451,0.56738522469114,1.24564449799115,0.502497330513487,0,1.52032191293582,4.84319602106695,0,3.16462387440884,1.26753171787165,7.22854619881148,4.40283155567589,0.898629049171961,4.05477610672067,1.76798145366788,2.85012743741249,1.79025009479181,3.47061892152804,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.72571360654893,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,4.98978217526377,2.16742572642506,0,0,0,0,0,0.293600439334847,1.66198622559563,9.6261334785668,2.17010870715852,0.223915474239924,0,0,2.03557534291391,0,0.485168122375632,6.97287110717054,0.411167888021826,0.929119112685311,2.01384674625505,0.512321413058201,1.18241114944293,5.5159308917859,0.645484683583826,0,2.63539275359647,0.272906150057846,2.02251136000576,6.73384563215986,0.320929027076094,1.91801137739712,0.329851300186716,0.398927315243264,1.70489900213078,5.22376629531451,0.56738522469114,1.24564449799115,0.502497330513487,0,1.52032191293582,4.84319602106695,0,3.16462387440884,1.26753171787165,7.22854619881148,4.40283155567589,0.898629049171961,4.05477610672067,1.76798145366788,2.85012743741249,1.79025009479181,3.47061892152804,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.72571360654893,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:60145332..60145348,- | |short_description=p@chr11:60145332..60145348,- | ||
}} | }} |
Latest revision as of 23:14, 23 July 2015
Short description: | p@chr11:60145332..60145348, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60145332..60145348, - |
Coexpression cluster: | C883_CD14_CD14CD16_Monocytederived_spleen_Macrophage_Basophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.88e-50 | 76 |
hematopoietic system | 3.48e-48 | 98 |
blood island | 3.48e-48 | 98 |
bone element | 1.87e-46 | 82 |
hemolymphoid system | 2.69e-43 | 108 |
skeletal element | 6.09e-42 | 90 |
immune system | 1.90e-40 | 93 |
skeletal system | 2.64e-37 | 100 |
lateral plate mesoderm | 1.03e-20 | 203 |
musculoskeletal system | 1.90e-20 | 167 |
connective tissue | 5.75e-12 | 371 |
mesoderm | 1.81e-11 | 315 |
mesoderm-derived structure | 1.81e-11 | 315 |
presumptive mesoderm | 1.81e-11 | 315 |