FFCP PHASE1:Hg19::chr11:59864658..59864704,+: Difference between revisions
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|id=chr11:59864658..59864704,+
|short_description=p@chr11:59864658..59864704,+
|description=CAGE_peak_at_chr11:59864658..59864704,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:59864658..59864704,+ | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_at_chr11:59864658..59864704,+ | |||
|id=chr11:59864658..59864704,+ | |||
|ontology_enrichment_celltype=CL:0002274!3.29e-83!5;CL:0000457!3.29e-83!5;CL:0002191!3.29e-83!5;CL:0000097!3.29e-83!5;CL:0000831!3.29e-83!5;CL:0002028!3.29e-83!5;CL:0000163!2.13e-46!9;CL:0000151!4.78e-12!35;CL:0000766!1.26e-07!76;CL:0000738!5.94e-07!140;CL:0000763!8.11e-07!112;CL:0000049!8.11e-07!112;CL:0000775!8.15e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.46e-125;5!CL:0000163;2.82e-70;9!CL:0000151;1.11e-15;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.24e-125,5;CL:0002028,1.24e-125,5;CL:0000163,2.58e-70,9;CL:0000151,2.87e-18,36;CL:0000839,3.78e-10,66;CL:0000557,5.22e-10,67;CL:0000766,2.29e-09,72 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.81e-40;1!UBERON:0003056;1.71e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000941!4.44e-18!1;UBERON:0004904!4.44e-18!1;UBERON:0002464!4.44e-18!1;UBERON:0001021!4.44e-18!1;UBERON:0001785!4.44e-18!1;UBERON:0002171!8.72e-18!1;UBERON:0006518!8.72e-18!1;UBERON:0008949!8.72e-18!1;UBERON:0000101!8.72e-18!1;UBERON:0002167!8.72e-18!1;UBERON:0002135!1.03e-17!1;UBERON:0001301!1.44e-17!1;UBERON:0003714!1.03e-09!2;UBERON:0005162!1.03e-09!2;UBERON:0000122!1.03e-09!2;UBERON:0002133!1.57e-09!2;UBERON:0003978!9.12e-07!3;UBERON:0009751!9.12e-07!3;UBERON:0000946!9.12e-07!3;UBERON:0002523!9.12e-07!3;UBERON:0005983!9.12e-07!3;UBERON:0002165!9.12e-07!3;UBERON:0002062!9.12e-07!3;UBERON:0007280!9.12e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.81e-40;1!UBERON:0001785;1.81e-40;1!UBERON:0002464;1.81e-40;1!UBERON:0004904;1.81e-40;1!UBERON:0001021;1.81e-40;1!UBERON:0003714;5.15e-21;2!UBERON:0005162;5.15e-21;2!UBERON:0000122;5.15e-21;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.21e-40,1;UBERON:0001785,2.21e-40,1;UBERON:0002464,2.21e-40,1;UBERON:0004904,2.21e-40,1;UBERON:0001021,2.21e-40,1;UBERON:0003902,2.21e-40,1;UBERON:0005425,2.21e-40,1;UBERON:0003714,5.70e-21,2;UBERON:0005162,5.70e-21,2;UBERON:0000122,5.70e-21,2;UBERON:0001781,3.42e-11,4;UBERON:0002371,6.50e-09,76;UBERON:0001474,2.59e-08,82;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0004765,1.24e-07,90;UBERON:0002405,2.08e-07,93;UBERON:0002390,4.61e-07,98;UBERON:0003061,4.61e-07,98;UBERON:0001434,6.20e-07,100 | |||
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|short_description=p@chr11:59864658..59864704,+ | |||
}} | }} |
Latest revision as of 23:13, 23 July 2015
Short description: | p@chr11:59864658..59864704, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:59864658..59864704, + |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.24e-125 | 5 |
basophil mast progenitor cell | 1.24e-125 | 5 |
endocrine cell | 2.58e-70 | 9 |
secretory cell | 2.87e-18 | 36 |
myeloid lineage restricted progenitor cell | 3.78e-10 | 66 |
granulocyte monocyte progenitor cell | 5.22e-10 | 67 |
myeloid leukocyte | 2.29e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.21e-40 | 1 |
cranial nerve | 2.21e-40 | 1 |
nerve trunk | 2.21e-40 | 1 |
nerve connecting eye with brain | 2.21e-40 | 1 |
nerve | 2.21e-40 | 1 |
retinal neural layer | 2.21e-40 | 1 |
presumptive neural retina | 2.21e-40 | 1 |
neural tissue | 5.70e-21 | 2 |
multi cell component structure | 5.70e-21 | 2 |
neuron projection bundle | 5.70e-21 | 2 |
layer of retina | 3.42e-11 | 4 |
bone marrow | 6.50e-09 | 76 |
bone element | 2.59e-08 | 82 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
skeletal element | 1.24e-07 | 90 |
immune system | 2.08e-07 | 93 |
hematopoietic system | 4.61e-07 | 98 |
blood island | 4.61e-07 | 98 |
skeletal system | 6.20e-07 | 100 |