FFCP PHASE1:Hg19::chr11:59521653..59521681,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:59521653..59521681,+
|short_description=p@chr11:59521653..59521681,+
|description=CAGE_peak_at_chr11:59521653..59521681,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:59521653..59521681,+ | |||
|coexpression_cluster_id=C446 | |||
|description=CAGE_peak_at_chr11:59521653..59521681,+ | |||
|id=chr11:59521653..59521681,+ | |||
|ontology_enrichment_celltype=CL:0000860!8.56e-09!45;CL:0002057!1.21e-08!42;CL:0000766!4.84e-08!76;CL:0000763!9.84e-07!112;CL:0000049!9.84e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.55e-12;33!CL:0002057;1.55e-12;33!CL:0000097;4.42e-11;5!CL:0000094;5.84e-09;8!CL:0000473;1.20e-08;39!CL:0000234;1.20e-08;39!CL:0000766;1.53e-07;69!CL:0000576;2.10e-07;48!CL:0000775;2.90e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.94e-16,72;CL:0000860,3.82e-12,42;CL:0002057,3.82e-12,42;CL:0000097,4.60e-11,5;CL:0002028,4.60e-11,5;CL:0000839,1.13e-10,66;CL:0000557,2.05e-10,67;CL:0000473,6.11e-10,48;CL:0000234,6.11e-10,48;CL:0000763,1.56e-09,108;CL:0000049,1.56e-09,108;CL:0000094,7.49e-09,8;CL:0000775,3.00e-07,3;CL:0000738,5.64e-07,136;CL:0002194,6.28e-07,59;CL:0000576,6.28e-07,59;CL:0000040,6.28e-07,59;CL:0000559,6.28e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;6.00e-09;42!UBERON:0006215;4.05e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.87e-21!115;UBERON:0005743!4.69e-11!86;UBERON:0001017!2.05e-10!82;UBERON:0000073!6.31e-10!94;UBERON:0001016!6.31e-10!94;UBERON:0001049!1.76e-09!57;UBERON:0005068!1.76e-09!57;UBERON:0006241!1.76e-09!57;UBERON:0007135!1.76e-09!57;UBERON:0000955!1.38e-08!69;UBERON:0006238!1.38e-08!69;UBERON:0001950!1.20e-07!20;UBERON:0003080!1.71e-07!42;UBERON:0002619!2.03e-07!22;UBERON:0002616!2.72e-07!59;UBERON:0002780!3.23e-07!41;UBERON:0001890!3.23e-07!41;UBERON:0006240!3.23e-07!41;UBERON:0001893!8.37e-07!34;UBERON:0002020!9.16e-07!34;UBERON:0003528!9.16e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.52e-12;22!UBERON:0001950;1.39e-11;20!UBERON:0000956;3.52e-10;25!UBERON:0000203;3.52e-10;25!UBERON:0001869;2.60e-07;32!UBERON:0000073;7.51e-07;53!UBERON:0002616;7.51e-07;53!UBERON:0003528;7.71e-07;34!UBERON:0002020;7.71e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.78e-13,81;UBERON:0002193,8.98e-13,108;UBERON:0002619,3.95e-12,22;UBERON:0000955,4.40e-12,68;UBERON:0006238,4.40e-12,68;UBERON:0002390,6.28e-12,98;UBERON:0003061,6.28e-12,98;UBERON:0001016,1.22e-11,89;UBERON:0001950,1.29e-11,20;UBERON:0001049,3.09e-11,56;UBERON:0005068,3.09e-11,56;UBERON:0006241,3.09e-11,56;UBERON:0007135,3.09e-11,56;UBERON:0000073,4.13e-11,53;UBERON:0002616,4.13e-11,53;UBERON:0007023,4.20e-11,114;UBERON:0000956,2.64e-10,25;UBERON:0000203,2.64e-10,25;UBERON:0002405,1.95e-09,93;UBERON:0003075,2.01e-09,82;UBERON:0007284,2.01e-09,82;UBERON:0002780,9.03e-09,41;UBERON:0001890,9.03e-09,41;UBERON:0003080,9.03e-09,41;UBERON:0006240,9.03e-09,41;UBERON:0002346,1.17e-08,86;UBERON:0001869,1.79e-08,32;UBERON:0002371,2.06e-08,76;UBERON:0003056,2.82e-08,61;UBERON:0003528,6.99e-08,34;UBERON:0002020,6.99e-08,34;UBERON:0001893,8.84e-08,34;UBERON:0002791,2.22e-07,32;UBERON:0001474,2.42e-07,82;UBERON:0010371,2.88e-07,104 | |||
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| ||
|short_description=p@chr11:59521653..59521681,+ | |||
}} | }} |
Latest revision as of 23:11, 23 July 2015
Short description: | p@chr11:59521653..59521681, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:59521653..59521681, + |
Coexpression cluster: | C446_Neutrophils_Mast_Eosinophils_Whole_CD14_immature_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.94e-16 | 72 |
classical monocyte | 3.82e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.82e-12 | 42 |
mast cell | 4.60e-11 | 5 |
basophil mast progenitor cell | 4.60e-11 | 5 |
myeloid lineage restricted progenitor cell | 1.13e-10 | 66 |
granulocyte monocyte progenitor cell | 2.05e-10 | 67 |
defensive cell | 6.11e-10 | 48 |
phagocyte | 6.11e-10 | 48 |
myeloid cell | 1.56e-09 | 108 |
common myeloid progenitor | 1.56e-09 | 108 |
granulocyte | 7.49e-09 | 8 |
neutrophil | 3.00e-07 | 3 |
leukocyte | 5.64e-07 | 136 |
monopoietic cell | 6.28e-07 | 59 |
monocyte | 6.28e-07 | 59 |
monoblast | 6.28e-07 | 59 |
promonocyte | 6.28e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.78e-13 | 81 |
hemolymphoid system | 8.98e-13 | 108 |
regional part of cerebral cortex | 3.95e-12 | 22 |
brain | 4.40e-12 | 68 |
future brain | 4.40e-12 | 68 |
hematopoietic system | 6.28e-12 | 98 |
blood island | 6.28e-12 | 98 |
nervous system | 1.22e-11 | 89 |
neocortex | 1.29e-11 | 20 |
neural tube | 3.09e-11 | 56 |
neural rod | 3.09e-11 | 56 |
future spinal cord | 3.09e-11 | 56 |
neural keel | 3.09e-11 | 56 |
regional part of nervous system | 4.13e-11 | 53 |
regional part of brain | 4.13e-11 | 53 |
adult organism | 4.20e-11 | 114 |
cerebral cortex | 2.64e-10 | 25 |
pallium | 2.64e-10 | 25 |
immune system | 1.95e-09 | 93 |
neural plate | 2.01e-09 | 82 |
presumptive neural plate | 2.01e-09 | 82 |
regional part of forebrain | 9.03e-09 | 41 |
forebrain | 9.03e-09 | 41 |
anterior neural tube | 9.03e-09 | 41 |
future forebrain | 9.03e-09 | 41 |
neurectoderm | 1.17e-08 | 86 |
cerebral hemisphere | 1.79e-08 | 32 |
bone marrow | 2.06e-08 | 76 |
pre-chordal neural plate | 2.82e-08 | 61 |
brain grey matter | 6.99e-08 | 34 |
gray matter | 6.99e-08 | 34 |
telencephalon | 8.84e-08 | 34 |
regional part of telencephalon | 2.22e-07 | 32 |
bone element | 2.42e-07 | 82 |
ecto-epithelium | 2.88e-07 | 104 |